EY692844

Overview
NameEY692844
Unique NameEY692844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1219 contig Csv1_Contig1219:231..1100. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692844 vs. ExPASy Swiss-Prot
Match: MTPC1_ARATH (Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.260e-28
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 3 
Query:  234 GGSILGVKFLDPLAGLVISGIILKAGLEMGYQSVLELVDAAIPVENLMPI*PAENLTPIQETILKVEGVKGCHRLRGRRASSPLYLDVHIV 506
            GGSILGV FLDPLAGLV+S +I+ AGL+ G+QS+LELVDAAI         PA+ L PI++TIL+VEGVKGCHRLRGRRA S LYLDVHIV
Sbjct:  248 GGSILGVNFLDPLAGLVVSTMIVNAGLKTGHQSILELVDAAI---------PAQQLEPIRQTILQVEGVKGCHRLRGRRAGSSLYLDVHIV 329

HSP 2 Score: 23.483 bits (49), Expect = 3.260e-28
Identity = 9/13 (69.23%), Postives = 13/13 (100.00%), Query Frame = 1 
Query:  196 RADAVSSVVALIG 234
            R+DA+SS+VAL+G
Sbjct:  234 RSDAISSLVALVG 246
The following BLAST results are available for this feature:
BLAST of EY692844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MTPC1_ARATH3.260e-2870.33Metal tolerance protein C1 OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-005-A10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692844 ID=EY692844; Name=EY692844; organism=Citrus sinensis; type=EST; length=866bp
CCACGCGTCCGGCTGCTACGTTGCGATGCTGATGCTATTGGGTCACTACT
GCATCGCGTGCTGCTGGGTTGTTGATGGGTGATGGCTGTAATTGTTGTGT
GAGTGTGTAAGGCAGTGAAGGTGTGGCTGTCGGCTGCTGTTTGTTGTTGC
TTTACGGATGGTGGTGAAATTTTTGGTAGAACAGATGTAAAAGAACGTGC
TGATGCGGTTTCGTCTGTAGTTGCTCTTATTGGGGAGGTTCTATTCTTGG
AGTTAAGTTTCTAGATCCCCTTGCCGGTTTAGTTATCTCAGGCATAATCC
TAAAAGCTGGACTTGAGATGGGTTATCAGAGTGTCTTGGAACTGGTGGAT
GCTGCAATCCCAGTAGAAAATTTGATGCCTATATGACCAGCAGAAAATTT
GACGCCTATACAAGAAACAATACTAAAAGTTGAAGGAGTCAAGGGGTGCC
ACCGTTTGAGGGGAAGGAGGGCAAGTTCACCTCTGTACCTTGATGTGCAT
ATTGTGGAAGCTTGCAGGTCGCTTTGTAAGTTTCAATTTTCGTTTAGAGT
GCTATCGGAAGATGATATTGTTGCTGGAACTTTTACAGGAAGTCTTGCTA
GAAATCTTATTGTTGGAGTACTTGCATTAATTTTTGGAAGTTTTGTTGGG
TAACTTGGCTTGGTGGCTGGAATTCTTATTGCTTTTCTTAGAGTTTGATT
GGAATTTGACTGCAATTTTATACTTTGGGATGGATTTTTCANTTTGGGAT
GTTTTATTATGTATTGGTGGAGATCACATTGGATATTAGATNGTATTCTT
TTTAATTAATTTTTGGGATTGATGAAATGTAATTGATATTTTTTGTAAAA
AAAAAAAAAAAAAGGN
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