EY692827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_SOLTU (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum GN=THF1 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 4.012e-66 Identity = 124/199 (62.31%), Postives = 157/199 (78.89%), Query Frame = 1 Query: 172 SLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRASSSSSRMIIQCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEGEXEGILNDIAKRPAARE 768 ++TSV+F++I Q S +RK +VSS+RS+ + FRFR++ V R+S+S+SR ++ C S++ PTVA+TK+ FL YKRPIP++YNTVLQELIVQQHL RYK++YQYDPVFALGFVTVYD+LMEGYPS+EDR AIF+AYI ALKEDPE YR DAQKLEEWAR Q AN+L +F SKEGE E I DIA+R ++ Sbjct: 3 AVTSVSFSAITQ-SAERKSSVSSSRSI----DTFRFRSNFSFDSVNVRSSNSTSRFVVHCTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKEGEIENIFKDIAQRAGTKD 196 HSP 2 Score: 28.1054 bits (61), Expect = 4.012e-66 Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 770 FSYSRFFAVGLVRFFDW-QLH*PTVLEK 850 F YSR FAVGL R + + PT+LEK Sbjct: 198 FCYSRLFAVGLFRLLELANVTDPTILEK 225
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_ORYSJ (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.502e-62 Identity = 109/141 (77.30%), Postives = 124/141 (87.94%), Query Frame = 1 Query: 331 SRMIIQCMSTATDVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEGEXEGILNDIAKR 753 SR +++C++TA DVPPTVAETKMNFLK YKRPI SIY+TVLQEL+VQQHLMRYK TYQYD VFALGFVTVYD+LMEGYPS+EDR+AIF+AYITAL EDPE YR DAQK+EEWAR Q NSL EF SK+GE E IL DI++R Sbjct: 44 SRSVVRCVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISER 184 HSP 2 Score: 35.039 bits (79), Expect = 1.502e-62 Identity = 18/36 (50.00%), Postives = 24/36 (66.67%), Query Frame = 2 Query: 746 QKDQRQGKFSYSRFFAVGLVRFFDW-QLH*PTVLEK 850 ++ Q +G FSYSRFFAVGL R + PT+L+K Sbjct: 183 ERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDK 218
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_ARATH (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 7.379e-62 Identity = 121/204 (59.31%), Postives = 149/204 (73.04%), Query Frame = 1 Query: 172 SLTSVAFTSIGQTSCQRKVNVSSTRSLVSNFEGFRFRTSLFCHCVRFRA----SSSSSRMIIQCMSTAT-DVPPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEGEXEGILNDIAKRPAARE 768 +++S++F ++GQ+ +SNF R S C +F S S+S+ +I CMS T DVPP V+ETK FLK YKRPIPSIYNTVLQELIVQQHLMRYK+TY+YDPVFALGFVTVYD+LMEGYPSD+DR+AIF+AYI AL EDP+ YRIDAQK+EEWAR QT+ SL +F SKEG+ E +L DIA R ++E Sbjct: 5 AISSLSFPALGQSD------------KISNFASSRPLASAIRICTKFSRLSLNSRSTSKSLIHCMSNVTADVPP-VSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEGDIEAVLKDIAGRAGSKE 195 HSP 2 Score: 30.8018 bits (68), Expect = 7.379e-62 Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = 2 Query: 770 FSYSRFFAVGLVRFFDW-QLH*PTVLEK 850 FSYSRFFAVGL R + PTVL+K Sbjct: 197 FSYSRFFAVGLFRLLELASATDPTVLDK 224
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_NOSP7 (Protein thf1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=thf1 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22 Identity = 50/132 (37.88%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLF------EFPSKEGEXEGILNDIAKRP 756 TV++TK F L+ RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +DR M+GY + D+E+IF A A+++DP+HYR DA++L+ A+G L + ++ + + L IA P Sbjct: 6 TVSDTKRTFYNLHTRPINTIYRRVVEELMVEMHLLSVNIDFSYNPIYALGVVTTFDRFMQGYEPERDQESIFNALCRAIEQDPQHYRQDAERLQAIAKGLPVKDLIGWLGQTTYLDRDADLQAQLQAIANNP 137
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_ACAM1 (Protein thf1 OS=Acaryochloris marina (strain MBIC 11017) GN=thf1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.279e-22 Identity = 48/131 (36.64%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEG-----EXEGILNDIAKRP 756 TV++TK F ++ RP+ S+Y V++EL+V+ HL+R ++YDP+FALG T +DR M+GY + D++AIF A A + DP + D Q+L E A+ ++A + ++ ++ E + L +IA+ P Sbjct: 6 TVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGGDELQWQLRNIAQNP 136 HSP 2 Score: 23.8682 bits (50), Expect = 9.279e-22 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 767 KFSYSRFFAVGL 802 KF YSR FA+GL Sbjct: 137 KFKYSRLFAIGL 148
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_TRIEI (Protein thf1 OS=Trichodesmium erythraeum (strain IMS101) GN=thf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.208e-21 Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEF 702 TV++TK F + RPI SIYN V++EL+V+ HL+ Y Y+P +ALG VT +DR M+GY ED+ +IF A I +EDP YR DA+ LE+ A +A+ + + Sbjct: 6 TVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQGYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSW 113 HSP 2 Score: 24.2534 bits (51), Expect = 1.208e-21 Identity = 13/24 (54.17%), Postives = 14/24 (58.33%), Query Frame = 2 Query: 743 LQKDQR----QGKFSYSRFFAVGL 802 LQ D R KF YSR FA+GL Sbjct: 126 LQDDLRAISENSKFRYSRLFAIGL 149
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_ANASP (Protein thf1 OS=Anabaena sp. (strain PCC 7120) GN=thf1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.209e-21 Identity = 46/111 (41.44%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSK 711 TV++TK F L+ RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +DR MEGY + D+E+IF A A++++P+ YR DA++L+ A+ N L + S+ Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMEGYQPERDKESIFSAICQAVEQEPQRYRQDAERLQAVAQSLPVNDLVAWLSQ 116 HSP 2 Score: 23.483 bits (49), Expect = 1.209e-21 Identity = 10/20 (50.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 743 LQKDQRQGKFSYSRFFAVGL 802 LQ F YSR FA+GL Sbjct: 130 LQAIANNSNFKYSRLFAIGL 149
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_CYAP4 (Protein thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=thf1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.462e-21 Identity = 57/140 (40.71%), Postives = 82/140 (58.57%), Query Frame = 1 Query: 373 PPTVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPSKEG-----EXEGILNDIAKRPAAREIQL 777 P TV++TK F + RPI SIY V++EL+V+ HL+R +T+ YDPVFALG VT ++R M+GY D+ +IF A A + DP+ + DAQ+L RGQ+ SL ++ S E + L IA P + +L Sbjct: 4 PRTVSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQGYHPPADQTSIFNAICLAQELDPQQVQQDAQELLGRVRGQSLESLLDWISTAASLGGDEQQNRLRAIASNPTFKYSRL 143 HSP 2 Score: 22.3274 bits (46), Expect = 3.462e-21 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 2 Query: 770 FSYSRFFAVGL 802 F YSR FAVGL Sbjct: 138 FKYSRLFAVGL 148
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_ANAVT (Protein thf1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=thf1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.505e-21 Identity = 49/132 (37.12%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSLFEFPS------KEGEXEGILNDIAKRP 756 TV++TK F L+ RPI +IY V++EL+V+ HL+ + Y+P++ALG VT +DR M+GY + D+E+IF A A++++P+ YR DA++L+ A+ N L + S ++ + + L IA P Sbjct: 6 TVSDTKRTFYALHTRPINTIYRRVVEELMVEMHLLSVNVDFSYNPIYALGVVTTFDRFMQGYQPERDKESIFSAICQAVEQEPQRYRQDAERLKAVAQSLPVNDLVAWLSQANHLQQDADLQAQLQAIASNP 137 HSP 2 Score: 22.3274 bits (46), Expect = 4.505e-21 Identity = 10/20 (50.00%), Postives = 11/20 (55.00%), Query Frame = 2 Query: 743 LQKDQRQGKFSYSRFFAVGL 802 LQ F YSR FA+GL Sbjct: 130 LQAIASNPNFKYSRLFAIGL 149
BLAST of EY692827 vs. ExPASy Swiss-Prot
Match: THF1_CYAP7 (Protein thf1 OS=Cyanothece sp. (strain PCC 7424) GN=thf1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.791e-19 Identity = 45/105 (42.86%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 379 TVAETKMNFLKLYKRPIPSIYNTVLQELIVQQHLMRYKRTYQYDPVFALGFVTVYDRLMEGYPSDEDREAIFQAYITALKEDPEHYRIDAQKLEEWARGQTANSL 693 TV+++K +F + RPI S+Y V++EL+V+ HL+ +QYDPV+ALG VT + R M+GY D D+E+IF A ++ DP+ YR DA+++ E A+ +A L Sbjct: 6 TVSDSKRDFYTKHTRPINSVYRRVVEELMVEMHLLSVNSDFQYDPVYALGVVTSFQRFMQGYRPDADKESIFNALCQSVGGDPQQYRQDAERMIESAKQLSAQQL 110 HSP 2 Score: 20.7866 bits (42), Expect = 1.791e-19 Identity = 6/12 (50.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 767 KFSYSRFFAVGL 802 K+ Y+R FA+G+ Sbjct: 139 KYKYTRLFAIGI 150 The following BLAST results are available for this feature:
BLAST of EY692827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY692827 ID=EY692827; Name=EY692827; organism=Citrus sinensis; type=EST; length=852bpback to top |