EY692824

Overview
NameEY692824
Unique NameEY692824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.573e-43
Identity = 95/222 (42.79%), Postives = 147/222 (66.22%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVAANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKKELK-YNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIAT 675
            L+ PKYDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  +    +A++ DIC ST+AAPTYFPPHY  T  S +G    F+LVDG VAA +P+LL+IS ++  + +++P F     ++ + ML+LSLGTGT  +  K Y A +A+KWGI +W+     +P+ ++ S  SS + D+++S +FQ+  S  +YLR+Q++ LTG A + D A+
Sbjct:  109 LVEPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKTPELDAKMYDICYSTAAAPTYFPPHYFATNTS-NGDQYDFNLVDGDVAAVDPSLLSIS-VATRLAQEDPAFASIKSLNYKQMLLLSLGTGTNSEFAKNYTAEEAAKWGILQWM-----SPLWEMRSAASSYMNDYYLSTVFQALDSQNNYLRVQENALTGTATTFDDAS 323          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.831e-40
Identity = 91/225 (40.44%), Postives = 143/225 (63.56%), Query Frame = 1
Query:   10 RLLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            +  GPKYDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 QFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 337          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PAT15_SOLTU (Patatin-15 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.307e-40
Identity = 90/224 (40.18%), Postives = 143/224 (63.84%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            + GP+YDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 IFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 336          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.307e-40
Identity = 91/225 (40.44%), Postives = 142/225 (63.11%), Query Frame = 1
Query:   10 RLLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            +  GPKYDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 QFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWM-----LAIRQMTNAASSYMADYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 337          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PAT06_SOLTU (Patatin-06 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.307e-40
Identity = 90/224 (40.18%), Postives = 143/224 (63.84%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            + GP+YDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 IFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 336          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.237e-40
Identity = 91/224 (40.62%), Postives = 142/224 (63.39%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            +LGP YDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  E+   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL++S ++ ++ + +P+F     +D + ML+LSLGTGT ++ +  Y A + +KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  108 ILGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHYFVTHTS-NGDRYEFNLVDGGVATVGDPALLSLS-VATKLAQVDPKFASIKSLDYKQMLLLSLGTGTNSEFDKTYTAQETAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 324          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.076e-39
Identity = 90/225 (40.00%), Postives = 142/225 (63.11%), Query Frame = 1
Query:   10 RLLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            +  GPKYDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ L G    +D A+E
Sbjct:  120 QFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASE 337          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.405e-39
Identity = 90/224 (40.18%), Postives = 141/224 (62.95%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            + GP+YDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  E+   +A++ DIC ST+AAP YFPPH+  T  S +G T  F+LVDG VA   +P LL++S ++  + + +P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 IFGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAESPQLDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGAVATVGDPALLSLS-VATRLAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 336          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.835e-39
Identity = 90/224 (40.18%), Postives = 142/224 (63.39%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            ++GP YDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 IIGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 336          
BLAST of EY692824 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.835e-39
Identity = 90/224 (40.18%), Postives = 142/224 (63.39%), Query Frame = 1
Query:   13 LLGPKYDGKYLRTLVNDLLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGT-AKKELKYNAAKASKWGIFEWIYEDSNTPILDIYSDGSSDIVDFHVSALFQSCGSXGHYLRIQDDTLTGDAASVDIATE 678
            ++GP YDGKYL  ++ + LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP YFPPHY  T  S +G    F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT ++ +  Y A +A+KWG   W+       I  + +  SS + D+++S +FQ+  S  +YLR+Q++ LTG    +D A+E
Sbjct:  120 IIGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAQEAAKWGPLRWM-----LAIQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASE 336          
The following BLAST results are available for this feature:
BLAST of EY692824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PT3K1_SOLTU3.573e-4342.79Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 ... [more]
PATJ1_SOLTU2.831e-4040.44Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT15_SOLTU6.307e-4040.18Patatin-15 OS=Solanum tuberosum PE=2 SV=1[more]
PAT12_SOLTU6.307e-4040.44Patatin-12 OS=Solanum tuberosum PE=2 SV=1[more]
PAT06_SOLTU6.307e-4040.18Patatin-06 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K4_SOLTU8.237e-4040.63Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PAT11_SOLTU1.076e-3940.00Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT0_SOLTU1.405e-3940.18Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PATM3_SOLTU1.835e-3940.18Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]
PATM2_SOLTU1.835e-3940.18Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-H01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692824 ID=EY692824; Name=EY692824; organism=Citrus sinensis; type=EST; length=945bp
CCACGCGTCCGGCTGCTTGGACCAAAGTATGATGGGAAGTACCTGCGGAC
ACTAGTGAACGATTTACTAGGAGACGTTACTGTGAAAGAGACTCTTACCA
ACGTGGTTATACCAACTTTTGACATCAAGCTTCTTCAACCAGTCATCTTC
TCAACCACCGATGGAAAAGAGAACGTTTTGAAGAATGCTCGGCTGGCTGA
TATATGCATCAGCACTTCTGCAGCGCCCACTTACTTCCCACCTCACTACT
TGGAGACTAAGGACAGTGACAGTGGCGGAACCCGCACTTTTGATCTTGTT
GACGGTGGAGTTGCTGCTAATAATCCTACCCTATTGGCAATAAGCCACAT
ATCGAAGGAAATGGTGAAGCAGAACCCCCAGTTCAGGGACAAAAACCCAA
TGGACGGTAGAGATATGCTGGTACTATCACTAGGCACAGGTACAGCCAAG
AAAGAATTGAAGTACAATGCAGCCAAAGCCTCCAAGTGGGGCATTTTCGA
ATGGATCTATGAAGATAGCAATACCCCAATACTCGACATCTACTCTGATG
GAAGCTCCGATATTGTTGATTTCCATGTGTCTGCTCTCTTTCAATCCTGC
GGAAGCAANGGACACTACCTTCGAATTCAGGACGACACGTTGACTGGTGA
TGCAGCATCTGTTGACATTGCCACGGAGGAGATATGCAAAGGCTTGTGGA
AACTGGAACCAAGTTGTGAAGGAGCANGTGTCGAGGGTGAACCTGNAGAC
TGNCANATATGAAAAGTTGACGGGAGAGTCACAAATGAAGAGCACTTGCT
CACTTTGCCAAATACTCTTTGACAACTAAAGTTCCGCGCCGGCAAAGTCT
TATTATTGGAACTCGTTTATTTGAGTAAGCAAAAGATTCCCATGCGTGTT
TTATTGTAATCATCCGCCCAAGGCTTCCATTGGACTTACAATAAT
back to top