EY692820

Overview
NameEY692820
Unique NameEY692820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692820 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.895e-25
Identity = 92/266 (34.59%), Postives = 127/266 (47.74%), Query Frame = 3
Query:   12 GICFDMFSVKEIYLHPDTFTKMCKLRFLKFYNSKDDGENKCKVSYLVGPGF--AEVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHN--------GKLKQIISRACNFFTKSP----------------NHSLTL-----HLDKLVNLNLNNCKSLRILPAGIFRLEFLRELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSIECLSRLSALYLDXXXXXXXXXXXXXXXXXXXFIYLRWCSSLKSLPD 716
            GI  DM ++K    +P+ F KMC LR LK Y SK   E K  VS+  G  +  +++R LHW  YPL SLP + +PE LV + +P    ++LW   +           KLK++     +  TK P                N  L+L     +L KLV LNL  C  L  +P+ +  LE L  L+L GCSKL   PEIS   N++ +Y+ GT I+E+PSSI+ L  L  L L+                    + L  C SL+  PD
Sbjct: 1155 GIFLDMLNLK-FDANPNVFEKMCNLRLLKLYCSK--AEEKHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPS-MVDLESLEVLNLSGCSKLGNFPEISP--NVKELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPD 1414          
BLAST of EY692820 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20
Identity = 73/227 (32.16%), Postives = 112/227 (49.34%), Query Frame = 3
Query:   12 GICFDMFSVKE-IYLHPDTFTKMCKLRFLKFYNSKD-DGENKCKVSYLVGPGFA---EVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSPN---------------------HSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLRELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSIECLSRLSALYLD 614
            GI  DM  +KE +Y+   TF +M  L +LKFY S   D + K K+  L   G +   ++R LHW  YPL+  PS+  PE LV + M H  +++LW  V+    L+ +   +       PN                      S   +L  L+ L ++ CK L I+P  I  L  L  L    C++L+T PEIS+  NI ++ L GTAI E+P S++  S++  + ++
Sbjct:  531 GISLDMCEIKEELYISEKTFEEMRNLVYLKFYMSSPIDDKMKVKLQ-LPEEGLSYLPQLRLLHWDAYPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCESLVELPSSIKNLQHLILLEMSCCKKLEIIPTNI-NLPSLEVLHFRYCTRLQTFPEIST--NIRLLNLIGTAITEVPPSVKYWSKIDEICME 753          
BLAST of EY692820 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.752e-17
Identity = 68/183 (37.16%), Postives = 92/183 (50.27%), Query Frame = 3
Query:   51 LHPDTFTKMCKLRFLKFYNSKDDGENKCKVSYLVGPGFA---EVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSPNHSLT-----LHLDKLVNLNLNNCKSLRILPAGIFRLEFLRELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSS 575
            L P  F  M  LR LK Y S    E    +++  G   +   E+R LHW  YPLKSLP N  P  LV I MP+  +Q+LW   ++   L+ I  R C+      +H L      L  + L  ++L  C  L+  PA   RL  LR ++L GC K+K++ EI    NIE ++L GT I  LP S
Sbjct:  515 LQPSAFKNMLNLRLLKIYCSNP--EVHPVINFPTGSLHSLPNELRLLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTI--RLCH------SHHLVDIDDLLKAENLEVIDLQGCTRLQNFPAA-GRLLRLRVVNLSGCIKIKSVLEIPP--NIEKLHLQGTGILALPVS 684          
BLAST of EY692820 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15
Identity = 66/186 (35.48%), Postives = 89/186 (47.85%), Query Frame = 3
Query:   30 FSVKEIYLHPDTFTKMCKLRFLKFYNSKDDGE---NKCKVSYLVGPGFAEVRYLHWYGYPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSPNHSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLRELDLWGCSKLKTLPEISSAGNIEVMYLNGTAIEELPSSI 578
            F +K +      F  M  LR  K Y+S  +     N  K S    P    +R LHW  YPL+ LP N  P  LV I MP+  +++LW   +    LK I  R C+         L L    L  ++L  C  L+  PA   +L  LR ++L GC+++K+ PEI    NIE + L GT I ELP SI
Sbjct:  506 FDIKHV-----AFDNMLNLRLFKIYSSNPEVHHVNNFLKGSLSSLPNV--LRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTI--RLCHSQQLVDIDDL-LKAQNLEVVDLQGCTRLQSFPA-TGQLLHLRVVNLSGCTEIKSFPEIPP--NIETLNLQGTGIIELPLSI 678          
BLAST of EY692820 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12
Identity = 61/219 (27.85%), Postives = 98/219 (44.75%), Query Frame = 3
Query:  195 YPLKSLPSNIHPEKLVSIEMPHGNIQQLWDDVEHNGKLKQIISRACNFFTKSP----------------------NHSLTLHLDKLVNLNLNNCKSLRILPAGIFRLEFLRELDLWGCSKLKTLPEISSAGNIEV-MYLNGTAIEELPSSI-ECLSRLSALYLDXXXXXXXXXXXXXXXXXXXFIYLRWCSSLKSLPDELGN-XKL*QXDAEELLXKMP 776
            YP +S PS    + LV +++ H +++ LW + +H   L++I        T++P                      +HSL     K++ L LN+CKSL+  P     +E L  L L  C  L+ LPEI      E+ +++ G+ I ELPSSI +  + ++ L L                     + +  CS L+SLP+E+G+   L   DA + L   P
Sbjct:  584 YPWESFPSTFELKMLVHLQLRHNSLRHLWTETKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEEVHHSLGC-CSKVIGLYLNDCKSLKRFPC--VNVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRP 799          
The following BLAST results are available for this feature:
BLAST of EY692820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WRK19_ARATH3.895e-2534.59Probable WRKY transcription factor 19 OS=Arabidops... [more]
Y4117_ARATH3.772e-2032.16Putative disease resistance protein At4g11170 OS=A... [more]
WRK52_ARATH1.752e-1737.16Probable WRKY transcription factor 52 OS=Arabidops... [more]
WRK16_ARATH2.798e-1535.48Probable WRKY transcription factor 16 OS=Arabidops... [more]
TMVRN_NICGU2.217e-1227.85TMV resistance protein N OS=Nicotiana glutinosa GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692820 ID=EY692820; Name=EY692820; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGGGTATATGTTTTGATATGTTTTCAGTAAAAGAGATCTAT
CTGCATCCAGATACTTTCACAAAGATGTGTAAATTGAGATTTTTGAAATT
CTATAACTCTAAAGATGATGGAGAGAACAAATGTAAGGTGTCTTATTTGG
TAGGACCTGGATTTGCTGAAGTGAGGTATCTTCACTGGTATGGATATCCA
CTAAAATCATTGCCGTCAAATATTCATCCAGAGAAACTTGTTTCAATTGA
AATGCCTCATGGTAATATTCAACAACTTTGGGATGATGTCGAGCATAATG
GTAAGTTAAAGCAGATAATAAGCCGGGCCTGCAATTTTTTCACCAAATCT
CCAAACCACTCGTTGACCCTGCATCTGGACAAGCTAGTTAACCTCAATCT
AAACAATTGCAAAAGCTTGAGAATTCTTCCAGCTGGAATATTTCGTTTGG
AATTTCTTAGAGAACTTGATCTTTGGGGCTGCTCAAAACTAAAAACACTT
CCAGAGATATCATCAGCTGGTAATATAGAAGTGATGTATTTAAATGGAAC
TGCAATTGAAGAACTGCCTTCATCCATAGAATGTCTGTCTCGGCTTTCGG
CCTTATACCTTGATAATTGTAAAAAGCTGAAGAGTCTCCCAAGCAGCCTA
TGTAAATTGAACTCTCTGAACTTTATTTATCTCAGGTGGTGCTCAAGTCT
TAAGAGTTTGCCTGATGAACTTGGAAATTANAAACTTTGACAGTTNGATG
CTGAGGAACTGCTATANAAAATGCCGTTGCCATTNNGTGTTGAACAATTT
GATGGCTGAAAATCTACGTCTTTATCTAACTGATGCGGCATACGGATTAC
CTGAAAATTGGGCAGTTTCCTTGTAC
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