EY692817

Overview
NameEY692817
Unique NameEY692817
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNJA ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain JA-3-3Ab) GN=fabZ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.354e-20
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 2
Query:  425 PTVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            P V   +QI +ILPHR+PFLLVDRV+EY P   AV +KNVT N+ FF GHFP RPIMP  L+V AMAQ  G+V+
Sbjct:   23 PPVFTTDQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMPGVLIVEAMAQLGGIVL 96          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNJB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. GN=fabZ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20
Identity = 46/74 (62.16%), Postives = 54/74 (72.97%), Query Frame = 2
Query:  425 PTVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            P V    QI +ILPHR+PFLLVDRV+EY P   AV +KNVT N+ FF GHFP RPIMP  L+V AMAQ  G+V+
Sbjct:   23 PPVFTTEQILEILPHRYPFLLVDRVVEYQPGQRAVGLKNVTFNEPFFQGHFPNRPIMPGVLIVEAMAQIGGIVL 96          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_THEEB ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Thermosynechococcus elongatus (strain BP-1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 42/74 (56.76%), Postives = 58/74 (78.38%), Query Frame = 2
Query:  428 TVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVML 649
            TV+ + +++ +LPHR+PFLLVDR+I+Y P   AV +KNVTIN+ FF GHFP RPIMP  L+V A+AQ  G+V++
Sbjct:   11 TVLTVTELQQLLPHRYPFLLVDRIIDYVPEKYAVGLKNVTINEPFFQGHFPGRPIMPGVLIVEALAQVGGVVLM 84          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_GEOMG ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=fabZ PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.920e-19
Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 2
Query:  428 TVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            TV DIN+I  ILPHR+PFLLVDR++E+ P    V IKNVTIN+ FF GHFP  PIMP  L+V AMAQ  G++
Sbjct:    3 TVFDINEIMKILPHRYPFLLVDRIVEHVPGERIVGIKNVTINEPFFQGHFPGHPIMPGVLIVEAMAQVGGIL 74          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNY3 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechocystis sp. (strain PCC 6803) GN=fabZ PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.319e-18
Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  428 TVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            T   I +I D+LPHR+PF LVDR+I++ P   AV +KNVTIN+ FFPGH P+RPIMP  L+V +MAQ  G+++
Sbjct:   22 TQFTIQEISDLLPHRYPFALVDRIIDFQPGKCAVGLKNVTINEPFFPGHIPDRPIMPGVLIVESMAQVGGVIL 94          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SOLUE ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Solibacter usitatus (strain Ellin6076) GN=fabZ PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.595e-18
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVMLHPXXEALVKISL 685
            ++DIN+IR ILPHR+PFLLVDR++E       V IKNVT N+  F GHFP+ P+MP  ++V AMAQ  G+++LH   +   K+ L
Sbjct:    3 ILDINEIRAILPHRYPFLLVDRILEMETD-RIVGIKNVTFNEPQFTGHFPDFPVMPGVMIVEAMAQTAGVLVLHSMPDRANKLVL 86          

HSP 2 Score: 26.1794 bits (56), Expect = 1.595e-18
Identity = 9/21 (42.86%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  700 SKITKPLIAGDTLXMRMTLVK 762
            ++  KP++ GDTL M M ++K
Sbjct:   93 ARFRKPVVPGDTLRMEMKIIK 113          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_SYNS9 ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Synechococcus sp. (strain CC9902) GN=fabZ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18
Identity = 44/72 (61.11%), Postives = 54/72 (75.00%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            V+   QI  +LPHR+PF LVDRVI Y P VSA AIKN+T+N+  F GHFPERP+MP  L+V AMAQ  GL++
Sbjct:   10 VLTSEQIAGLLPHRYPFALVDRVIAYEPGVSATAIKNITMNEPQFQGHFPERPLMPGVLIVEAMAQVGGLIV 81          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_MICAN ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Microcystis aeruginosa (strain NIES-843) GN=fabZ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 2
Query:  428 TVMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLVM 646
            T   + +IR +LPHR+PF LVDR+I+Y P   AV +KNVTIN+ FFPGH P RP+MP  L+V +MAQ  G+++
Sbjct:   17 TTFTVEEIRQLLPHRYPFALVDRIIDYVPGQKAVGLKNVTINEPFFPGHIPNRPLMPGVLIVESMAQVGGVIL 89          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_MARMS ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Marinomonas sp. (strain MWYL1) GN=fabZ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 2
Query:  431 VMDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +MD+N+IR  LPHR+PFLLVDR++E N   S +A KNVTIN+ FF GHFP  P+MP  L++ AMAQ  G++
Sbjct:    1 MMDVNEIRQYLPHRYPFLLVDRIVEINLNDSIIAYKNVTINEPFFNGHFPNHPVMPGVLIIEAMAQAAGVL 71          
BLAST of EY692817 vs. ExPASy Swiss-Prot
Match: FABZ_LEGPL ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Legionella pneumophila (strain Lens) GN=fabZ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.722e-18
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  434 MDINQIRDILPHRFPFLLVDRVIEYNPRVSAVAIKNVTINDNFFPGHFPERPIMPXCLMVXAMAQXXGLV 643
            +DINQI  +LPHR+PF+LVDRVI+Y      +AIKNVTIN+NFF GHFP  PIMP  LM+ A+AQ  G++
Sbjct:    5 IDINQIFTLLPHRYPFILVDRVIDYKVMEYLIAIKNVTINENFFTGHFPGNPIMPGVLMLEALAQASGIL 74          
The following BLAST results are available for this feature:
BLAST of EY692817 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FABZ_SYNJA5.354e-2062.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNJB6.993e-2062.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_THEEB3.471e-1956.76(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_GEOMG5.920e-1962.50(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNY31.319e-1856.16(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SOLUE1.595e-1850.59(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_SYNS91.722e-1861.11(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_MICAN1.722e-1854.79(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_MARMS1.722e-1857.75(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]
FABZ_LEGPL1.722e-1861.43(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehyd... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692817 ID=EY692817; Name=EY692817; organism=Citrus sinensis; type=EST; length=927bp
AATCCCATCATTGGTCTCTCCTACTAGTACCCATAGACTATCTCGTTAAT
GTCGCCGCCGACCAACTGTCATGGGTTTGATTTAAATGTCTATTCTTACA
TCTCTGCCTCATTTTATTAGTTAACTTATTACTCCTCAATTGAATCAATA
GAATCCAATCTCTCAGTTCTTCTCTCTTACAATGGCTACTGCCCCTGCTG
CTTCCTTTGCCAATTCACTTTTATCTCTCAATTCTCATCGACCAAATCCA
AATGCCTCTTCTATTTCAAAACCCAACACTCTCTCCATCCAATTCGACAA
GAAGACGAATCAACAACAACAGCAGCACCAACGACATGCTCGTTTCACCA
CATTTTGTTCTTTGGACGCTGAACCCAAAGATTCCATCGAAGATAAACCC
ATCGAACTTCGGTACCAGGCATTTCCTACAGTGATGGACATTAACCAGAT
TCGTGACATTTTGCCACACAGGTTCCCATTTCTTTTGGTGGATAGAGTTA
TTGAATACAATCCACGAGTTTCAGCTGTTGCTATTAAGAATGTTACTATT
AATGATAACTTCTTTCCTGGCCATTTTCCTGAGAGGCCAATTATGCCCCN
GTGTCTCATGGTTGANGCAATGGCACAGGNTGNTGGCTTGGTTATGCTGC
ACCCCAANNTGGAGGCTCTCGTGAAAATTTCTCTTTGCTTGAATTGATAA
GTAAGATCACGAAACCACTGATTGCAGGTGACACTTTGNTCATGAGAATG
ACACTTGTCAAGCTACAAGAACCCTTCGGATAGCAAATATGGAAGGAAAG
CTTATGTGGAAGGTGAGTGGTCTCCCAGGTGAGTTTATGTGGCTCCGGGA
GTAAAATGTGGGCTTTTTGGGAGTTCTCATTGGAACCGAGGAATTCCCTG
ATCTCCCCGGGAATTTGAGAACCCTTT
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