EY692804

Overview
NameEY692804
Unique NameEY692804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692804 vs. ExPASy Swiss-Prot
Match: AROF_ECOLI (Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive OS=Escherichia coli (strain K12) GN=aroF PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = -2
Query:    4 QRLPSALELKHQLPLSPFLNEQIHAHRQAVRAILKGEDSRLLVIVGPCSIHDPESAMEYARNLKKLAHEVSDQM 225
            Q L +  +LK   PLS     QI   R+++  I+ G D RLLV+ GPCSIHDPE+A+EYAR  K LA EVSD +
Sbjct:   15 QVLMTPEQLKAAFPLSLQQEAQIADSRKSISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSL 88          
BLAST of EY692804 vs. ExPASy Swiss-Prot
Match: AROF_SALTY (Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive OS=Salmonella typhimurium GN=aroF PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = -2
Query:    4 QRLPSALELKHQLPLSPFLNEQIHAHRQAVRAILKGEDSRLLVIVGPCSIHDPESAMEYARNLKKLAHEVSDQM 225
            Q L +  +LK   PLS     QI   R  +  I+ G D RLLV+ GPCSIHDPE+A+EYAR  K LA EVSD +
Sbjct:   15 QVLMTPEQLKAAFPLSLAQEAQIAQSRGIISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSL 88          
BLAST of EY692804 vs. ExPASy Swiss-Prot
Match: AROF_SALTI (Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive OS=Salmonella typhi GN=aroF PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.800e-12
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = -2
Query:    4 QRLPSALELKHQLPLSPFLNEQIHAHRQAVRAILKGEDSRLLVIVGPCSIHDPESAMEYARNLKKLAHEVSDQM 225
            Q L +  +LK   PLS     QI   R  +  I+ G D RLLV+ GPCSIHDPE+A+EYAR  K LA EVSD +
Sbjct:   15 QVLMTPEQLKAAFPLSLAQEAQIAQSRGIISDIIAGRDPRLLVVCGPCSIHDPETALEYARRFKALAAEVSDSL 88          
BLAST of EY692804 vs. ExPASy Swiss-Prot
Match: AROH_ENTAG (Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive OS=Enterobacter agglomerans GN=aroH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.886e-11
Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = -2
Query:    4 PSALELKHQLPLSPFLNEQIHAHRQAVRAILKGEDSRLLVIVGPCSIHDPESAMEYARNLKKLAHEVSDQM 216
            P +L  +H  P+SP + + + A R+ +  IL GED RLLV++GPCS+HDP++A+EYA  L  L     D++
Sbjct:   18 PPSLAAEH--PVSPAIADNVTAARKRIACILTGEDHRLLVVIGPCSLHDPKAALEYAERLNALRRRYEDRL 86          
The following BLAST results are available for this feature:
BLAST of EY692804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
AROF_ECOLI1.706e-1251.35Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-s... [more]
AROF_SALTY3.800e-1251.35Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-s... [more]
AROF_SALTI3.800e-1251.35Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-s... [more]
AROH_ENTAG1.886e-1143.66Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-s... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-F03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692804 ID=EY692804; Name=EY692804; organism=Citrus sinensis; type=EST; length=562bp
CAGCATCTGGTCACTGACTTCATGGGCCAGTTTTTTCAGGTTGCGCGCGT
ATTCCATGGCCGATTCCGGGTCGTGGATCGAGCACGGACCGACAATCACC
AGCAGGCGAGAGTCTTCGCCCTTGAGAATGGCGCGCACGGCTTGGCGATG
GGCGTGGATCTGTTCGTTGAGGAATGGGCTCAGGGGCAGTTGGTGCTTGA
GCTCAAGGGCACTGGGCAAACGCTGGGTCAGCGCTTCATTGGCGCAGGAC
AGGGTANAAACAGGCANAGCGGCGATCGAGGAGTTCATATTCGGGCTTTC
TGGGCAAGCANCGGGCTGTTCCCGCACGCTCTGCCCTACTGGGGGTGTCG
ACAATTGGCCGTATTGGCTACNAGTGTTGGCTTGCCACCATAGGTGACCG
ATCCGAGGCGGGAAGCTGTCCCAACCGAGCTTGCTAATCCCAGGCGGGGG
AGGTGCGTANCGGTATAGTGGCGTANTCATGTCGGAGTCCTTAATGTTCG
GGGGGGCAAAATATAAGGCTGAAAAAAAACCCCCGTCGGGGGCCACCGGG
GTTAATTTTTTG
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