EY692792

Overview
NameEY692792
Unique NameEY692792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9263 contig Csv1_Contig9263:12..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_DANRE (Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.241e-68
Identity = 118/181 (65.19%), Postives = 149/181 (82.32%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHTH+F A+++E    INPGSATGA+S++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    2 LVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFEAFENENKFYINPGSATGAYSALESNITPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_RAT (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 2.117e-68
Identity = 117/181 (64.64%), Postives = 148/181 (81.77%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_PONAB (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.117e-68
Identity = 117/181 (64.64%), Postives = 148/181 (81.77%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_MOUSE (Vacuolar protein sorting-associated protein 29 OS=Mus musculus GN=Vps29 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.117e-68
Identity = 117/181 (64.64%), Postives = 148/181 (81.77%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_BOVIN (Vacuolar protein sorting-associated protein 29 OS=Bos taurus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.117e-68
Identity = 117/181 (64.64%), Postives = 148/181 (81.77%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 186
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_HUMAN (Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.765e-68
Identity = 117/180 (65.00%), Postives = 147/180 (81.67%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 542
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK
Sbjct:    2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 181
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_CHICK (Vacuolar protein sorting-associated protein 29 OS=Gallus gallus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.161e-68
Identity = 115/181 (63.54%), Postives = 147/181 (81.22%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC K+ +DYLK +  D+H++RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE    INPGSATGA+ ++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKDTYDYLKTLAGDVHVVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYHALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 186
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_XENTR (Vacuolar protein sorting-associated protein 29 OS=Xenopus tropicalis GN=vps29 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.372e-67
Identity = 117/181 (64.64%), Postives = 147/181 (81.22%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE  DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_XENLA (Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis GN=vps29 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.372e-67
Identity = 117/181 (64.64%), Postives = 147/181 (81.22%), Query Frame = 3 
Query:    3 LVLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 545
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE  DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++HE    INPGSATGA++++  ++ PSFVLMDI    VV YVY+LI  +VKV++I++KK+
Sbjct:    2 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHENKFYINPGSATGAYNALENNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
[Close]
BLAST of EY692792 vs. ExPASy Swiss-Prot
Match: VPS29_DICDI (Vacuolar protein sorting-associated protein 29 OS=Dictyostelium discoideum GN=vps29 PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.191e-65
Identity = 107/179 (59.78%), Postives = 144/179 (80.45%), Query Frame = 3 
Query:    6 VLSLGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAFSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 542
            ++++GD+H+PHR+  +P +FK +LVP KIQHI+CTGNL  KE+HDY K++  D+HI+RG+ DE T YP+TK ++IGQFK GLCHGHQ++PWGD  SLA LQRQLDVD+L++GHTH    ++  G + +NPGSATGAFS+I+ DV PSFVLMD+    + VY+Y+LIDG+VKV+KID  K
Sbjct:    3 IIAIGDVHVPHRSYGIPPEFKKLLVPEKIQHILCTGNLVSKEIHDYFKVLTSDVHIVRGDLDENTSYPDTKIVSIGQFKFGLCHGHQIVPWGDRASLAALQRQLDVDVLISGHTHVLEVFESNGKLFVNPGSATGAFSNISNDVIPSFVLMDVQSNNITVYIYKLIDGQVKVEKIDHVK 181
The following BLAST results are available for this feature:
BLAST of EY692792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
VPS29_DANRE1.241e-6865.19Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_RAT2.117e-6864.64Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_PONAB2.117e-6864.64Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_MOUSE2.117e-6864.64Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_BOVIN2.117e-6864.64Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_HUMAN2.765e-6865.00Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_CHICK6.161e-6863.54Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENTR1.372e-6764.64Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENLA1.372e-6764.64Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_DICDI2.191e-6559.78Vacuolar protein sorting-associated protein 29 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-E03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692792 ID=EY692792; Name=EY692792; organism=Citrus sinensis; type=EST; length=733bp
TGTTGGTCTTATCGTTGGGCGATTTGCACATACCACATAGAGCAGCTGAT
TTGCCTGCCAAGTTTAAGTCCATGCTTGTTCCTGGCAAGATCCAACACAT
CGTTTGCACCGGCAATCTCTGCATCAAAGAAGTTCATGACTACCTAAAGA
TTATTTGTCCTGACTTGCATATTATTCGTGGTGAATATGATGAAGAGACA
CGATATCCTGAGACCAAAACGCTAACTATTGGTCAATTCAAACTAGGACT
GTGCCATGGTCATCAGGTTATTCCGTGGGGGGACCTAGACTCACTAGCCA
TGTTACAGAGGCAGCTGGATGTAGACATACTTGTGACTGGTCACACTCAT
CAGTTTACTGCTTATAAACACGAGGGAGGTGTGGTTATAAACCCAGGTTC
TGCCACCGGTGCTTTCAGCAGCATCACCTACGATGTTAATCCAAGTTTCG
TCCTCATGGATATCGATGGCCTGCGGGTTGTGGTCTATGTTTATGAACTC
ATTGATGGGGAGGTTAAAGTTGACAAGATTGATTTTAAGAAAACCAGCAC
ATGTCACTCTGCTCATTAAGAACAATGCTCAGATTTCAATTTTGTTGAAC
TGANCTCTCGATTCACCATATATGCGTGAGTCTGCAATACATGTGATTCC
ATTCTCTGTATGTGATTGGAAGATTTTGGTTTGTTTAAACTTAAGAAACA
ATNCTACGACCCTTTTTACCAAAAAAAAAAAAA
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