EY692790

Overview
NameEY692790
Unique NameEY692790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length958
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.131e-40
Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLEKFHADGFWRSFHKGRXI 631
            LA+TL  DGRRVHVIERD+TE DRIVGELLQPGGYLKL+EL L DCV +IDAQ+V GYAL  DGK+TRL YPLEKFH+D   RSFH GR +
Sbjct:   89 LAYTLANDGRRVHVIERDLTEQDRIVGELLQPGGYLKLIELGLEDCVNEIDAQRVFGYALYMDGKNTRLSYPLEKFHSDVAGRSFHNGRFV 179          

HSP 2 Score: 47.3654 bits (111), Expect = 1.131e-40
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 1
Query:  646 KKAVVFPMLQLEQGTLTSLVEKNGSLMGGQ*KIRVGKTL-CLPSLTIVLGGEL*TCAGTLVNK--EGWSSLLXVLL*KI*MSM*NEGG-ILSEH*PFFIFKISTRSL 954
            +KA   P +++EQGT+TSLVEK GS+ G Q K + G+ L     LTIV  G       +L N   E  S  + ++L  I +   N G  IL++  P   +KIS+  +
Sbjct:  184 EKAASLPNVRMEQGTVTSLVEKKGSVKGVQYKTKDGQELSAFAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVILADPSPILFYKISSTEI 290          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.707e-24
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLE--KFHADGFWRSFHKGRXI 631
            LA+ L KDGRRVHVIERD+ EP+RI+GE +QPGG L L +L L DC+E IDAQ+  G  + KDGK     +P++   F  D   RSFH GR +
Sbjct:   60 LAYALAKDGRRVHVIERDLREPERIMGEFMQPGGRLMLSKLGLEDCLEGIDAQKATGMTVYKDGKEAVASFPVDNNNFPFDPSARSFHNGRFV 152          

HSP 2 Score: 34.2686 bits (77), Expect = 3.707e-24
Identity = 20/51 (39.22%), Postives = 30/51 (58.82%), Query Frame = 1
Query:  646 KKAVVFPMLQLEQGTLTSLVEKNGSLMGGQ*KIRVG-KTLCLPSLTIVLGG 795
            +KA   P ++LE+GT+ SL+E+ G + G   K   G +T  L  LT+V  G
Sbjct:  157 QKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTALAPLTVVCDG 207          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.502e-22
Identity = 49/92 (53.26%), Postives = 63/92 (68.48%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLE-KFHADGFWRSFHKGRXI 631
            LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +L L DC+E+IDAQ+  G  L KDGK T   +P++  F  +   R FH GR +
Sbjct:   63 LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLMLSKLGLQDCLEEIDAQKSTGIRLFKDGKETVACFPVDTNFPYEPSGRFFHNGRFV 154          

HSP 2 Score: 31.187 bits (69), Expect = 2.502e-22
Identity = 19/51 (37.25%), Postives = 29/51 (56.86%), Query Frame = 1
Query:  646 KKAVVFPMLQLEQGTLTSLVEKNGSLMGGQ*KIRVG-KTLCLPSLTIVLGG 795
            +KA   P ++LE+GT+ SL+E+ G + G   K   G +T     LT+V  G
Sbjct:  159 QKASSLPNVRLEEGTVRSLIEEKGVVKGVTYKNSSGEETTSFAPLTVVCDG 209          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.882e-21
Identity = 59/161 (36.65%), Postives = 79/161 (49.07%), Query Frame = 2
Query:  161 HYIAGTLIXXXXXXXXXXXXNDSKKPRKV---STTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLEK-FHADGFWRSFHKGRXI 631
            H    TL+            N  KK  K+   +T  +   D     V AG  GS               LA+ L KDGRRVHVIERD+ EP R++GE +QPGG L L +L L DC+E ID Q   G A+ KDG+   + +P +  F  +   R+F+ GR +
Sbjct:    7 HVCLWTLLAFVLTWTVFYVNNRRKKVAKLPDAATEVRRDGDADVIIVGAGVGGSA--------------LAYALAKDGRRVHVIERDMREPVRMMGEFMQPGGRLLLSKLGLEDCLEGIDEQIATGLAVYKDGQKALVSFPEDNDFPYEPTGRAFYNGRFV 153          

HSP 2 Score: 34.6538 bits (78), Expect = 5.882e-21
Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 1
Query:  646 KKAVVFPMLQLEQGTLTSLVEKNGSLMGGQ*KIRVG-KTLCLPSLTIVLGG 795
            +KA   P +QLE+GT+ SL+E+ G + G   K   G +T     LT+V  G
Sbjct:  158 QKASSLPTVQLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAFAPLTVVCDG 208          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.490e-20
Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLE--KFHADGFWRSFHKGRXIYTGERK 649
            LA+ L KDGRRVHVIERD+ EP+R++GE +QPGG L L +L L DC+E IDAQ+  G A+ KDGK     +P++   F  +   RSFH GR +    RK
Sbjct:   60 LAYALAKDGRRVHVIERDMREPERMMGEFMQPGGRLMLSKLGLQDCLEDIDAQKATGLAVYKDGKEADAPFPVDNNNFSYEPSARSFHNGRFVQQLRRK 158          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.816e-20
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLEK-FHADGFWRSFHKGRXI 631
            LA+ L KDGRRVHVIERD+ EP R +GEL+Q GG   L +L L DC+E IDAQ+    A+ KDGK   L +P +K F  +   R    GR +
Sbjct:   58 LAYALAKDGRRVHVIERDLKEPQRFMGELMQAGGRFMLAQLGLEDCLEDIDAQEAKSLAIYKDGKHATLPFPDDKSFPHEPVGRLLRNGRLV 149          

HSP 2 Score: 30.4166 bits (67), Expect = 4.816e-20
Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = 1
Query:  646 KKAVVFPMLQLEQGTLTSLVEKNGSLMGGQ*KIRVGKTL-CLPSLTIVLGG 795
            +KA     +QLE+GT+ SL+E+ G + G   K   G+ +     LT+V  G
Sbjct:  154 QKAASLSNVQLEEGTVKSLIEEEGVVKGVTYKNSAGEEITAFAPLTVVCDG 204          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.653e-17
Identity = 58/129 (44.96%), Postives = 73/129 (56.59%), Query Frame = 2
Query:  251 TTYKTQNDVFRSSVNAGKNGSPTDXXXXXXXXXXXXLAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYAL-XKDGKS-TRLXYPLEKFHADGFWRSFHKGRXI 631
            T+  +QND     V AG  GS               L   L +DGR+V VIERD+ EPDRIVGE LQPGGY  L +L LGD VE +DAQ V GY +  ++ KS  ++ YPL + +     R+FH GR I
Sbjct:  116 TSTSSQNDPEVIIVGAGVLGSA--------------LVAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQVQSGRAFHHGRFI 230          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.105e-15
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYAL--XKDGKSTRLXYPLEKFHADGFWRSFHKGRXI 631
            LA  L +DGR+V VIERD+ EPDRIVGELLQPGGY  L EL LGD VE ++A  + GY +   +     ++ YPL + +      +FH GR I
Sbjct:  136 LAAVLSRDGRKVTVIERDLKEPDRIVGELLQPGGYRVLQELGLGDTVEGLNAHHIHGYIVHDYESRSEVQIPYPLSETNQVQSGIAFHHGRFI 228          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.064e-14
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYAL--XKDGKSTRLXYPLEKFHADGFWRSFHKGRXI 631
            LA  L +DGR V VIERD+ EPDRI+GE LQPGGY  L EL LGD VE ++A  + GY +   +     ++ YP+ + +      +FH G+ I
Sbjct:  137 LATVLSRDGRTVTVIERDLKEPDRILGECLQPGGYRVLRELGLGDTVESLNAHHIHGYVIHDCESRSEVQIPYPVSENNQVQSGVAFHHGKFI 229          
BLAST of EY692790 vs. ExPASy Swiss-Prot
Match: ERG1_SCHPO (Probable squalene monooxygenase OS=Schizosaccharomyces pombe GN=SPBC713.12 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.494e-12
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 2
Query:  359 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELSLGDCVEKIDAQQVLGYALXKDGKSTRLXYPLEKFHADGFWRSFHKGRXI 631
            L   LG+ GR+V V+ERD++EPDRIVGELLQPGG   L ++ + D VE ID Q   GY +     +  + YP +          FH GR +
Sbjct:   20 LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGIADAVEGIDGQWTSGYQIFYGDSNVSVPYPSKPNGGAYQGIGFHYGRFV 110          
The following BLAST results are available for this feature:
BLAST of EY692790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ERG1_PANGI1.131e-4074.73Squalene monooxygenase OS=Panax ginseng PE=2 SV=1[more]
ERG11_ARATH3.707e-2453.76Squalene monooxygenase 1,1 OS=Arabidopsis thaliana... [more]
ERG12_BRANA2.502e-2253.26Squalene monooxygenase 1,2 OS=Brassica napus GN=SQ... [more]
ERG11_BRANA5.882e-2136.65Squalene monooxygenase 1,1 OS=Brassica napus GN=SQ... [more]
ERG12_ARATH1.490e-2051.52Squalene monooxygenase 1,2 OS=Arabidopsis thaliana... [more]
ERG13_ARATH4.816e-2050.00Squalene monooxygenase 2 OS=Arabidopsis thaliana G... [more]
ERG1_HUMAN7.653e-1744.96Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=... [more]
ERG1_MOUSE1.105e-1549.46Squalene monooxygenase OS=Mus musculus GN=Sqle PE=... [more]
ERG1_RAT6.064e-1445.16Squalene monooxygenase OS=Rattus norvegicus GN=Sql... [more]
ERG1_SCHPO1.494e-1242.86Probable squalene monooxygenase OS=Schizosaccharom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-E01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692790 ID=EY692790; Name=EY692790; organism=Citrus sinensis; type=EST; length=958bp
TTCTCAAATACACCCACGCGTCCGAGCTGCTACTCCTGCTGTTCCCAAAA
CAGAAAAGAAATCCTCGATCAAACAACGACCGTCCATCTTTCTTGCATCA
TCAACCTCGGGTTCTCACCGTTTCTTCAATCTTTCTACCGAGAACAAGGC
TTCGATGGATCACTACATTGCGGGCACTCTCATTGCCGCTGTGTTTCTCC
TTCTCTTCGTTGTCCGCCGCAACGACAGTAAGAAGCCAAGGAAGGTTTCC
ACGACGTACAAGACGCAGAACGACGTTTTTCGGAGCTCTGTTAACGCCGG
AAAGAATGGCTCCCCTACCGACGTCATCATTGTTGGTGCCGGTGTTGCCG
GTGCTGCCTTGGCTCATACTCTTGGCAAGGATGGAAGACGAGTTCATGTG
ATAGAAAGAGATGTGACTGAGCCTGACAGAATTGTTGGTGAGCTGCTTCA
GCCTGGAGGATACCTGAAATTAGTTGAATTAAGTCTTGGAGATTGTGTGG
AAAAAATTGATGCCCAACAAGTACTTGGTTATGCTCTTTTNAAGGATGGA
AAAAGTACAAGACTGTNATATCCATTGGAGAAATTTCATGCAGATGGTTT
TTGGAGGAGCTTCCACAAAGGGCGNTTNATTTATACGGGTGAGAGAAAAA
AGCAGTAGTTTTTCCAATGTTACAACTGGAGCAAGGAACTTTAACATCCC
TTGTTGAGAAAAATGGGAGCTTAATGGGTGGGCAATAAAAAATAAGGGTG
GGCAAAACCCTTTGCTTACCCTCCCTTACAATTGTNTTGGGAGGTGAGTT
GTAAACCTGCGCCGGTACATTAGTAAACAAAGAGGGATGGTCCTCTTTAT
TATGNGTTTTGTTGTGAAAGATTTAAATGTCTATGTGAAACGAGGGCGGT
ATTTTATCAGAACACTAACCATTTTTTATATTTAAAATTAGTACAAGGTC
GTTGNTNG
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