EY692789

Overview
NameEY692789
Unique NameEY692789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2 SV=3)

HSP 1 Score: 323.168 bits (827), Expect = 1.300e-87
Identity = 159/194 (81.96%), Postives = 178/194 (91.75%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTILGEE 653
            MKTILSSETMDIPD V +K++AKVIEVEGPRGKL RDFKHLNLDF L+ D ETGK+KLKID+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNFLGEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSRS ALIN KCHVK KDI K LDGIYVSEKS I+ EE
Sbjct:    1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.896e-87
Identity = 163/194 (84.02%), Postives = 178/194 (91.75%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTILGEE 653
            MKTILSSETM+IPDGV +K+NAKVIEVEGPRGKL RDFKHLNLDF L+TDE  GK+KLKIDAWFGSRKTSAAIRTALSHV NLITGVTKG+RYKMRFVYA FPINASI N+NK+IEIRNFLGEKKVRKVD+LDGV++IRS+KVKDE+VLDGNDIELVSRS ALIN KCHVK KDI K LDGIYVSEK  ++ EE
Sbjct:    1 MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDEN-GKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 5.462e-86
Identity = 156/194 (80.41%), Postives = 175/194 (90.21%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTILGEE 653
            MKTILSSETMDIPDGV +K+NAKVIEVEGPRGKL+RDFKHLNLDF L+ D+ TGKR+LKID+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI  NNK+IEIRNFLGEKKVRKV+MLDGV ++RS+KVKDE++L+GNDIELVSRS ALIN KCHVK KDI K LDGIYVSEK  I  EE
Sbjct:    1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3)

HSP 1 Score: 303.908 bits (777), Expect = 8.162e-82
Identity = 152/190 (80.00%), Postives = 172/190 (90.53%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTIL+SETM+IP+GV V++ AKV+ VEGPRGKL+R+FKHLNLDF L+     G RKL++DAWFG+R+T AAIRTA+SHV NLITGVTKGYRYKMRFVYAHFPINASI N+N AIEIRNFLGEKKVRKVDML+GVT++RS+KVKDELVLDGNDIELVSRSAALIN KCHVKNKDI K LDGIYVS+K TI
Sbjct:    1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLE----GGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTI 186          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.818e-55
Identity = 110/194 (56.70%), Postives = 137/194 (70.62%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTILGEE 653
            MKTILS++T+DIPD V V +  + + V+GPRG L R+F H+NL+  L+  ++   +KL++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV    S   KDELVL+GNDIELVS SAALI     VKNKDI K LDGIYVSEK T++  E
Sbjct:    1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQ---KKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEPE 191          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_MOUSE (60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 8.505e-55
Identity = 107/190 (56.32%), Postives = 137/190 (72.11%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTILS++T+DIP+ V++ +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI     VKNKDI K LDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_MACFA (60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 108/190 (56.84%), Postives = 136/190 (71.58%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A IRT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI     VKNKDI K LDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 1.111e-54
Identity = 107/190 (56.32%), Postives = 136/190 (71.58%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI     VKNKDI K LDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_RAT (60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.451e-54
Identity = 107/190 (56.32%), Postives = 136/190 (71.58%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI     VKNKDI K LDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
BLAST of EY692789 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.451e-54
Identity = 107/190 (56.32%), Postives = 136/190 (71.58%), Query Frame = 3
Query:   72 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINXKCHVKNKDIXKVLDGIYVSEKSTI 641
            MKTILS++T+DIP+ V + +  + + V+GPRG L RDF H+N++  L+  +   K++L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  N   +EIRNFLGEK +R+V M  GV    S   KDEL+L+GNDIELVS SAALI     VKNKDI K LDGIYVSEK T+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187          
The following BLAST results are available for this feature:
BLAST of EY692789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
RL91_ARATH1.300e-8781.9660S ribosomal protein L9-1 OS=Arabidopsis thaliana... [more]
RL9_PEA2.896e-8784.0260S ribosomal protein L9 OS=Pisum sativum GN=RPL9 ... [more]
RL92_ARATH5.462e-8680.4160S ribosomal protein L9-2 OS=Arabidopsis thaliana... [more]
RL9_ORYSJ8.162e-8280.0060S ribosomal protein L9 OS=Oryza sativa subsp. ja... [more]
RL9_ICTPU3.818e-5556.7060S ribosomal protein L9 OS=Ictalurus punctatus GN... [more]
RL9_MOUSE8.505e-5556.3260S ribosomal protein L9 OS=Mus musculus GN=Rpl9 P... [more]
RL9_MACFA1.111e-5456.8460S ribosomal protein L9 OS=Macaca fascicularis GN... [more]
RL9_BOVIN1.111e-5456.3260S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=... [more]
RL9_RAT1.451e-5456.3260S ribosomal protein L9 OS=Rattus norvegicus GN=R... [more]
RL9_HUMAN1.451e-5456.3260S ribosomal protein L9 OS=Homo sapiens GN=RPL9 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692789 ID=EY692789; Name=EY692789; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGGGCAGCTCTATCTTAAGCGTAGGAGGAGAAGAAGAAGGA
AGATATTACAGAGAGAGGAAAATGAAGACAATTCTCTCTTCAGAGACTAT
GGACATCCCAGATGGGGTGAAAGTCAAGATAAATGCAAAGGTTATTGAAG
TAGAGGGACCGAGAGGTAAGCTCAGCCGCGACTTCAAGCATTTGAACCTC
GACTTCCATCTCATGACTGACGAGGAAACCGGTAAGCGCAAGCTTAAGAT
CGATGCCTGGTTCGGCTCTCGCAAGACCAGCGCCGCCATCAGAACTGCCC
TCAGCCATGTCGGCAATCTCATCACTGGTGTTACCAAGGGCTATCGCTAC
AAGATGAGATTTGTGTACGCTCACTTTCCCATCAACGCCTCCATCGGTAA
CAATAACAAGGCCATTGAGATCCGTAACTTTCTTGGAGAGAAAAAGGTTC
GAAAAGTGGATATGCTTGATGGTGTTACCGTCATTAGGTCCGATAAGGTT
AAGGATGAACTCGTTCTTGATGGAAATGACATTGAACTCGTGTCTCGCTC
TGCTGCTCTAATCAATCANAAATGCCATGTGAAGAACAAGGACATTANGA
AAGTTCTTGATGGGATCTATGTCAGTGAGAAAAGCACCATACTTGGAGAA
GAATGATGATTAGCTCTCGAATTTTCTTGTCATAGTAATGTTATGAATTA
TTTTTTAAATCTTTTTAATTTTGCCTCTTACTTTGAGTNGACGACATGCT
TTTGGTTGTATTTGGGGATTGGGACCTGGGGAGTCTANATTTCAATTTAT
GTCTTCAATTGCTTCATCACATATATGTATGGATTTATAGCTATGCATCT
GCATTTTTGATCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCG
GCCCT
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