EY692783

Overview
NameEY692783
Unique NameEY692783
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL172_ARATH (60S ribosomal protein L17-2 OS=Arabidopsis thaliana GN=RPL17B PE=2 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.768e-79
Identity = 144/173 (83.24%), Postives = 160/173 (92.49%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            MVKYS+EPDN TKSCKARGSDL VHFKNTRETAHAIRKLPL  AKR LEDV+AHKQAIPFT+FC GVGRTA AKN H NGQGRWP KSA+F+LDLLKNAESNA+VKGLDVDAL+ISH+QVNQA K+RRRTYRAHGRINPYMS+PCHIEL LS++EEPV+KEPETQLA ++S+K
Sbjct:    1 MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL171_ARATH (60S ribosomal protein L17-1 OS=Arabidopsis thaliana GN=RPL17A PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 5.144e-79
Identity = 143/173 (82.66%), Postives = 160/173 (92.49%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            MVKYS+EPDN TKSCKARG+DL VHFKNTRETAHAIRKLPL  AKR LEDV+AHKQAIPFT+FC GVGRTA AKN H NGQGRWP KSA+F+LDLLKNAESNA+VKGLDVDAL+ISH+QVNQA K+RRRTYRAHGRINPYMS+PCHIEL LS++EEPV+KEPETQLA ++S+K
Sbjct:    1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_MAIZE (60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.004e-74
Identity = 135/170 (79.41%), Postives = 151/170 (88.82%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSR 569
            MVKYS+EP NPTKS KA G DL VHFKNTRETA A+RKLPLT AKR LEDV+AHKQAIPF ++CGGVGRTA AK+ H NGQGRWPVKSA+FILDLLKNAESNADVKGLDVD LY+SH+QVNQAQK+RRRTYRAHGRINPYMSSPCHIEL LS++EEPV+KE +  +A  +
Sbjct:    1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 170          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL171_HORVU (60S ribosomal protein L17-1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 4.218e-73
Identity = 131/167 (78.44%), Postives = 147/167 (88.02%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLA 560
            MVKYS +P NPTKS KA G DL VHFKNTRETA A+RK+PL  AKR LEDV+AHKQAIPF ++C GVGRTA  KN  PNGQGRWP KSAKF+LDLLKNAESNA+VKGLDVDALYISH+QVNQAQK+RRRTYRAHGRINPYMS+PCHIEL LS++EEPV+KE E+ +A
Sbjct:    1 MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL172_HORVU (60S ribosomal protein L17-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.948e-71
Identity = 127/171 (74.27%), Postives = 148/171 (86.55%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRS 572
            MVKYS++P NPTKS KA G DL VHFKNTRETA A+R++PL  AKR LEDV+AHKQAIPF ++C GVGRTA  KN  PNGQGRWP KSA+F+LDLLKNAESNA+VKGLDVD LYISH+QVNQAQK+RRRTYRAHGRINPYMS+PCHIEL LS++EEPV+KE +  +A  ++
Sbjct:    1 MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQVNQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRKA 171          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_PODCA (60S ribosomal protein L17 OS=Podocoryne carnea GN=RPL17 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.237e-57
Identity = 114/176 (64.77%), Postives = 136/176 (77.27%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK*LS 587
            M KYS +P+NP KSCKARGS L VHFKNTRETA AI+K+ +  A R L+DV+A KQ IPF +FCGGVGR A AK    + QGRWPVKSA+F+L LLKNAESNADVKGLDVD+L I H+QVN+A   RRRTYRAHGRINPYMSSPCHIE+ +S++E+ V +  E       S+K L+
Sbjct:    1 MGKYSIDPENPIKSCKARGSYLRVHFKNTRETAQAIKKMHIRKAYRYLKDVIAKKQIIPFRRFCGGVGRKAQAKAFK-HTQGRWPVKSAEFLLGLLKNAESNADVKGLDVDSLVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEMIVSEKEQVVPRAEEEVEVKKVSKKKLA 175          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_AEDAL (60S ribosomal protein L17 OS=Aedes albopictus GN=RpL17 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.966e-55
Identity = 105/173 (60.69%), Postives = 135/173 (78.03%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +Y+KEPDNP KSCKARGS+L VHFKNTRETA AI+++PL  A++ L++V   K+ +PF +F GGVGR A AK+ + +  GRWP KSA+F+L LLKNAE+NAD +GLDVD L + H+QVN+A   RRRTYRAHGRINPYMSSPCHIEL+L+++E+ V K  E + A  +  K
Sbjct:    1 MGRYAKEPDNPAKSCKARGSNLRVHFKNTRETALAIKRMPLRRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLTEKEDVVSKAAENEPAKKKLSK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_AEDAE (60S ribosomal protein L17 OS=Aedes aegypti GN=RpL17 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.180e-55
Identity = 105/173 (60.69%), Postives = 135/173 (78.03%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSRSEK 578
            M +Y+KEPDNP KSCKARGS+L VHFKNTRETA AI+++PL  A++ L++V   K+ +PF +F GGVGR A AK+ + +  GRWP KSA+F+L LLKNAE+NAD +GLDVD L + H+QVN+A   RRRTYRAHGRINPYMSSPCHIEL+L+++E+ V K  E + A  +  K
Sbjct:    1 MGRYAKEPDNPAKSCKARGSNLRVHFKNTRETALAIKRMPLRRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLTEKEDVVTKAAENEPAKKKLSK 172          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_HUMAN (60S ribosomal protein L17 OS=Homo sapiens GN=RPL17 PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.571e-54
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSR 569
            MV+YS +P+NPTKSCK+RGS+L VHFKNTRETA AI+ + +  A + L+DV   KQ +PF ++ GGVGR A AK      QGRWP KSA+F+L +LKNAESNA++KGLDVD+L I H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+++E+ V K PE ++A  +
Sbjct:    1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKK 168          
BLAST of EY692783 vs. ExPASy Swiss-Prot
Match: RL17_FELCA (60S ribosomal protein L17 OS=Felis catus GN=RPL17 PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 2.571e-54
Identity = 105/170 (61.76%), Postives = 134/170 (78.82%), Query Frame = 3
Query:   60 MVKYSKEPDNPTKSCKARGSDLTVHFKNTRETAHAIRKLPLTNAKRCLEDVMAHKQAIPFTQFCGGVGRTAHAKNMHPNGQGRWPVKSAKFILDLLKNAESNADVKGLDVDALYISHMQVNQAQKRRRRTYRAHGRINPYMSSPCHIELTLSDQEEPVQKEPETQLATSR 569
            MV+YS +P+NPTKSCK+RGS+L VHFKNTRETA AI+ + +  A + L+DV   KQ +PF ++ GGVGR A AK      QGRWP KSA+F+L +LKNAESNA++KGLDVD+L I H+QVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+++E+ V K PE ++A  +
Sbjct:    1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK-PEEEVAQKK 168          
The following BLAST results are available for this feature:
BLAST of EY692783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
RL172_ARATH1.768e-7983.2460S ribosomal protein L17-2 OS=Arabidopsis thalian... [more]
RL171_ARATH5.144e-7982.6660S ribosomal protein L17-1 OS=Arabidopsis thalian... [more]
RL17_MAIZE1.004e-7479.4160S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=... [more]
RL171_HORVU4.218e-7378.4460S ribosomal protein L17-1 OS=Hordeum vulgare PE=... [more]
RL172_HORVU3.948e-7174.2760S ribosomal protein L17-2 OS=Hordeum vulgare PE=... [more]
RL17_PODCA4.237e-5764.7760S ribosomal protein L17 OS=Podocoryne carnea GN=... [more]
RL17_AEDAL3.966e-5560.6960S ribosomal protein L17 OS=Aedes albopictus GN=R... [more]
RL17_AEDAE5.180e-5560.6960S ribosomal protein L17 OS=Aedes aegypti GN=RpL1... [more]
RL17_HUMAN2.571e-5461.7660S ribosomal protein L17 OS=Homo sapiens GN=RPL17... [more]
RL17_FELCA2.571e-5461.7660S ribosomal protein L17 OS=Felis catus GN=RPL17 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D06-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692783 ID=EY692783; Name=EY692783; organism=Citrus sinensis; type=EST; length=933bp
CCACGCGTCCGAGCAAACCAACTTCACTGATACAGAGGCAGCATCCAAAA
TCAGCCGCCATGGTGAAGTACTCAAAAGAGCCTGACAATCCCACCAAGTC
CTGCAAAGCCAGGGGCTCTGATCTCACGGTTCATTTTAAGAACACGAGAG
AAACTGCCCATGCCATCAGGAAATTGCCTTTGACCAATGCTAAGAGGTGT
TTGGAGGATGTTATGGCCCATAAACAGGCCATTCCCTTCACACAATTCTG
CGGTGGTGTTGGACGTACTGCTCATGCAAAGAATATGCATCCAAATGGAC
AGGGACGATGGCCTGTCAAATCAGCAAAGTTCATTCTTGACTTGCTCAAG
AATGCTGAGAGTAATGCTGATGTGAAAGGTTTAGATGTTGATGCACTCTA
CATTTCTCACATGCAAGTCAACCAGGCACAAAAGCGAAGGCGCCGCACAT
ACCGTGCTCATGGAAGAATTAATCCTTACATGTCCTCTCCCTGCCATATT
GAGTTGACCTTATCTGACCAGGAAGAGCCAGTCCAGAAAGAGCCTGAGAC
CCAGTTGGCAACTAGCAGATCAGAGAAGTAATTGTCTGATGTTTAACATA
GCACTTGGAGAGTGCCCTGATATTCTATATTGTGTACTTGATGAAGCGAG
CTCTTATACCTTTTATACCGACTGAGATGTAATTTAGGCAAATGAGACTT
CATATTTTGTTTATTTGCATATACCGACAGTTTACTGGTTCTGTAGAATC
CTCAGTCATACTGATGGAGCTTTATGAAAATAGAGACTTTTCAAGCTTAT
TTGGAGCTAGAGATACAACAAAATAAAAAAAAGGGCGGCCGCGTATAAGG
ATCAGCTTACTTACCGTGCATGGACGGATAACCTCTTATAGGACACTATA
TTATTCATGGCCGGTTTACACCTCTTATTGGAA
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