EY692778

Overview
NameEY692778
Unique NameEY692778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692778_ssr35 microsatellite EY692778_ssr35:35..46. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY692778 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 7.415e-100
Identity = 165/180 (91.67%), Postives = 171/180 (95.00%), Query Frame = 2
Query:   98 PLLKDELDIVIPTIRNLDFLEQWKPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACKCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQHIMNLLSPSTPFFFNTLYDPYRDGADFVRRYPFSLREGVPTAVSHGLWLNXPDYDAPTQLVKPLER 637
            PLLKDELDIVIPTIRNLDFLE W+PFF+ YHLIIVQDGDPSK IKVPEGFDYELYNRNDINRILGPKASCISFKDSAC+CFGYMVSKKKY+YTIDDDCFVAKDP+G EINALEQHI NLLSPSTPFFFNTLYDPYR+G DFVR YPFSLREGVPTAVSHGLWLN PDYDAPTQLVKP ER
Sbjct:    9 PLLKDELDIVIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREGTDFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPHER 188          

HSP 2 Score: 32.3426 bits (72), Expect = 7.415e-100
Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  637 DTKFVDAXMTIPKEPSXHVC-MNLGFNR 717
            +T+FVDA +TIPK     +C MNL FNR
Sbjct:  189 NTRFVDAVLTIPKGSLFPMCGMNLAFNR 216          
BLAST of EY692778 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 354.755 bits (909), Expect = 1.646e-99
Identity = 166/182 (91.21%), Postives = 171/182 (93.96%), Query Frame = 2
Query:   92 AVPLLKDELDIVIPTIRNLDFLEQWKPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACKCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQHIMNLLSPSTPFFFNTLYDPYRDGADFVRRYPFSLREGVPTAVSHGLWLNXPDYDAPTQLVKPLER 637
            A PLLKDELDIVIPTIRNLDFLE W+PFFQ YHLIIVQDGDPSK IKVPEGFDYELYNRNDINRILGPKASCISFKDSAC+CFGYMVSKKKY+YTIDDDCFVAKDPSGK+INALEQHI NLL PSTP FFNTLYDPYRDGADFVR YPFS+REG PTAVSHGLWLN PDYDAPTQLVKP ER
Sbjct:    4 ATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYRDGADFVRGYPFSMREGAPTAVSHGLWLNIPDYDAPTQLVKPHER 185          

HSP 2 Score: 30.4166 bits (67), Expect = 1.646e-99
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  637 DTKFVDAXMTIPKEPSXHVC-MNLGFNR 717
            +T++VDA MTIPK     +C MNL F+R
Sbjct:  186 NTRYVDAVMTIPKGTLFPMCGMNLAFDR 213          
BLAST of EY692778 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 6.223e-99
Identity = 166/183 (90.71%), Postives = 173/183 (94.54%), Query Frame = 2
Query:   89 PAVPLLKDELDIVIPTIRNLDFLEQWKPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACKCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQHIMNLLSPSTPFFFNTLYDPYRDGADFVRRYPFSLREGVPTAVSHGLWLNXPDYDAPTQLVKPLER 637
            P+ PLLKDELDIVIPTIRNLDFLE W+ FFQ YHLIIVQDGDP+KTIKVPEGFDYELYNRNDINRILGPKASCISFKDSAC+CFGYMVSKKKY+YTIDDDCFVAKDPSGK+INALEQHI NLLSPSTPFFFNTLYDPYR+GADFVR YPFSLREG  TAVSHGLWLN PDYDAPTQLVKP ER
Sbjct:   13 PSTPLLKDELDIVIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKER 195          

HSP 2 Score: 28.1054 bits (61), Expect = 6.223e-99
Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 1
Query:  643 KFVDAXMTIPKEPSXHVC-MNLGFNR 717
            ++VDA MTIPK     +C MNL F+R
Sbjct:  198 RYVDAVMTIPKGTLFPMCGMNLAFDR 223          
BLAST of EY692778 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 3.359e-97
Identity = 162/180 (90.00%), Postives = 168/180 (93.33%), Query Frame = 2
Query:   98 PLLKDELDIVIPTIRNLDFLEQWKPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACKCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQHIMNLLSPSTPFFFNTLYDPYRDGADFVRRYPFSLREGVPTAVSHGLWLNXPDYDAPTQLVKPLER 637
            PLLKDELDIVIPTIRNLDFLE W+PFFQ YHLIIVQDGDPSK I VPEGFDYELYNRNDINRILGPKASCISFKDSAC+CFGYMVSKKKY+YTIDDDCFVAKDPSGK+INALEQHI NLL PSTP FFNTLYDPYR+GADFVR YPFS+REG  TAVSHGLWLN PDYDAPTQLVKP ER
Sbjct:   10 PLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRER 189          

HSP 2 Score: 30.4166 bits (67), Expect = 3.359e-97
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  637 DTKFVDAXMTIPKEPSXHVC-MNLGFNR 717
            +T++VDA MTIPK     +C MNL F+R
Sbjct:  190 NTRYVDAVMTIPKGTLFPMCGMNLAFDR 217          
The following BLAST results are available for this feature:
BLAST of EY692778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
UPTG_PEA7.415e-10091.67Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG1_SOLTU1.646e-9991.21Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG_MAIZE6.223e-9990.71Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG2_SOLTU3.359e-9790.00Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-D01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692778 ID=EY692778; Name=EY692778; organism=Citrus sinensis; type=EST; length=881bp
TACACAAATCAAAGTCTCTCATTTTTCTTTTTCCTTCTTTCTTTCTTTTT
TCTGAAACAAAATGGCGGCGGCAGCAACGACAACAAAGCCGGCTGTGCCG
CTGCTGAAAGACGAGCTGGACATCGTGATCCCCACGATCCGAAACTTGGA
CTTCTTGGAGCAGTGGAAGCCGTTTTTTCAAGCCTATCATTTGATCATCG
TTCAAGATGGTGACCCTTCGAAGACCATCAAAGTCCCTGAGGGATTTGAC
TACGAGCTCTATAATCGTAACGATATTAACCGGATTCTGGGTCCCAAAGC
TTCTTGCATATCCTTCAAAGACTCTGCCTGCAAGTGCTTTGGCTACATGG
TGTCCAAGAAGAAGTATGTTTACACCATTGATGACGATTGCTTTGTTGCT
AAAGACCCATCTGGCAAAGAAATTAATGCACTGGAGCAGCACATAATGAA
CCTGCTGAGTCCATCCACCCCATTTTTCTTTAACACTCTGTACGACCCAT
ACCGTGATGGAGCTGACTTCGTTCGCAGATATCCGTTCAGTCTTCGTGAG
GGTGTCCCCACTGCTGTTTCTCATGGCCTCTGGCTCAACANTCCAGATTA
TGATGCTCCCACCCAGCTTGTCAAGCCTCTTGAGAGGACACTAAGTTTGT
GGATGCAATNATGACAATACCAAAGGAACCCTCTNCCCATGTGTGTATGA
ATCTGGGATTCAACCGGATTGAATCGTCCTGCATGTACTTGGACTCATGT
TGATGCCACGCAATTGACGCTTGTGACATGGGGCTGTTGGTGCTCCAAGG
TTTNGGATCACTGGGATTGGTGGAAACAGGGTGCCTACTCTGGCCAGAAG
CTACAACCGTTGGATCCAAGAAGATCAAGGA
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