EY692726

Overview
NameEY692726
Unique NameEY692726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5C_ARATH (RING-H2 finger protein ATL5C OS=Arabidopsis thaliana GN=ATL5C PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 4.032e-48
Identity = 105/192 (54.69%), Postives = 119/192 (61.98%), Query Frame = 2
Query:  161 ILITPSLADNHDS---RTTNNNSLCPPPFIQDKANANANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGN-----------SVVGYGTSHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDILL 688
            + +  SLADNH +    T++     PPP    + N       S   P +AVV+ V             Y KHCKR N           ++  YG  +    N       RKNSGIDR+VIESLP+FRFGAL GHKDGLECAVCL RFEPTEVLRLLPKCKHAFHVECVDTWLD+HSTCPLCRYRVDPEDILL
Sbjct:   15 LFLNVSLADNHTAVVITTSDTPPPLPPPSPPPRHNFT-----SSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGY---YNGGGVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILL 198          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4J_ARATH (RING-H2 finger protein ATL4J OS=Arabidopsis thaliana GN=ATL4J PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31
Identity = 71/159 (44.65%), Postives = 94/159 (59.12%), Query Frame = 2
Query:  227 PPPFIQDKANANANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRG-NSVVGYGTSHSALINP-------SSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPED 679
            PPPF      AN       F+PS+AVV GV             YAK C     S  G    H   +         ++++ + SG+D+T IESLP+FRF AL+G K GL+C+VCL++FE  E+LRLLPKC+HAFH+ C+D WL+ H+TCPLCR RV  E+
Sbjct:   21 PPPFRNGDLVAN-------FEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEE 172          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2D_ARATH (Putative RING-H2 finger protein ATL2D OS=Arabidopsis thaliana GN=ATL2D PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.441e-29
Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 2
Query:  284 FKPSMAVVVGVXXXXXXXXXXXXXYAK--------HCKRGNSVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDIL 685
            FKPS+A++ GV             YAK                + +      L N SS   + SG+D+  IESLP FRF AL+G K GLEC+VCL++FE  E+LRLLPKC+HAFH+ C+D WL+ H+TCPLCR RV+ ED L
Sbjct:   37 FKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRSS---RFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDL 175          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22
Identity = 54/150 (36.00%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  227 PPPFIQDKANANANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGNSVVGYGT---SHSALINPSSTNR---KNSGIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            PP F  D  +++++ +FSP    +  ++G+              +K+C R +      T   +H+     SST R      G++ ++I+S+ ++++ +  G  DG +C+VCL+ FE  E LRLLPKC HAFH+ C+DTWL SHS CPLCR
Sbjct:   38 PPSFFLDDDSSSSSSSFSPL---LIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCR 184          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.886e-21
Identity = 60/153 (39.22%), Postives = 80/153 (52.29%), Query Frame = 2
Query:  239 IQDKANANANKNFSP--------FKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGN--SVVGYGTSHSALINPSSTNRKNSGIDRTVIESLPIFRFGALRGHKDG---LECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            IQ KANA   ++FSP          PS   V  V             Y +HC R N  S   Y  + +   N  S+ R   G+D  V+ES P+F + +++  K G   LECA+CL   E  E +RLLP C H FH++C+DTWL SH+TCP+CR
Sbjct:   21 IQSKANA---QSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRA---NDGSSRR--GGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCR 165          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL1N_ARATH (RING-H2 finger protein ATL1N OS=Arabidopsis thaliana GN=ATL1N PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 2
Query:  278 SPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGNSVVGYGTSHSALINPSSTNRKNS-GIDRTVIESLPIFRFGA---LRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDP 673
            S F P+MA+++ V             Y + C      + YG  + A  N  +TNR+ + G+D ++IE+ P F++     LR  K+ LEC+VCL  FE  E LRL+PKC H FH  C+D WL SH+TCPLCR  + P
Sbjct:   57 SRFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAG-NWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIP 191          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3A_ARATH (RING-H2 finger protein ATL3A OS=Arabidopsis thaliana GN=ATL3A PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 9.360e-21
Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  227 PPPFIQDKANANANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHC--KRGNSVVGYGTSHSALINPSS------TNRKNS----------------GIDRTVIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            PP F  D  + +++ +FSP    +  ++G+              +K+C  +R NS     TS +A+   SS      TN  N+                G+D ++I+S+ ++++  + G  +  +C+VCL+ F+  E LRLLPKC HAFHV C+DTWL SHS CPLCR
Sbjct:   40 PPSFYLDDEDDSSSSDFSPL---LIALIGILASAFILVSYYTLISKYCHRRRHNSS---STSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL2C_ARATH (Putative RING-H2 finger protein ATL2C OS=Arabidopsis thaliana GN=ATL2C PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.360e-21
Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  194 DSRTTNN--NSLCPPPFIQDKANANANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGN--SVVGYGTSHSALINPSST--NRKNSGIDRTVIESLPIFRFGALRGHK-DGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            + ++T N  +S  PPP I  K+N + +   S   P++ +++ +               K     +  S   Y  + +AL        N  +SG+D+++I++LP+F + ++ G K    +C VCL  FE  + LRLLPKC HAFHVEC+DTWL SHSTCPLCR
Sbjct:    7 EMKSTQNLISSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 52/137 (37.96%), Postives = 72/137 (52.55%), Query Frame = 2
Query:  260 NANKNFSPFKPSMAVVVGVXXXXXXXXXXXXXYAKHCKRGNSVVGYGTSHSALINPSST-NRKNSGIDRTVIESLPIFRFGALRGHKDG---LECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            N   N+    P+MAV+V +             Y +HC   + V   G S +      +T N    G+D +V+E+ P F +  ++  K G   LECA+CL  FE  E LRLLPKC H FH  C+D WL++H TCP+CR
Sbjct:   37 NQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHC---SGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170          
BLAST of EY692726 vs. ExPASy Swiss-Prot
Match: ATL4K_ARATH (RING-H2 finger protein ATL4K OS=Arabidopsis thaliana GN=ATL4K PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 41/72 (56.94%), Postives = 57/72 (79.17%), Query Frame = 2
Query:  446 NSGIDRTVIESLPIFRFGALRGHKD-GLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCR 658
            +SG+D++ I++LP+F + ++ G K+   +CAVCL  FE  + LRLLPKC HAFH++C+DTWL SHSTCPLCR
Sbjct:  105 DSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176          
The following BLAST results are available for this feature:
BLAST of EY692726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ATL5C_ARATH4.032e-4854.69RING-H2 finger protein ATL5C OS=Arabidopsis thalia... [more]
ATL4J_ARATH4.478e-3144.65RING-H2 finger protein ATL4J OS=Arabidopsis thalia... [more]
ATL2D_ARATH1.441e-2946.48Putative RING-H2 finger protein ATL2D OS=Arabidops... [more]
ATL5G_ARATH1.306e-2236.00Probable RING-H2 finger protein ATL5G OS=Arabidops... [more]
ATL4O_ARATH1.886e-2139.22RING-H2 finger protein ATL4O OS=Arabidopsis thalia... [more]
ATL1N_ARATH3.217e-2140.44RING-H2 finger protein ATL1N OS=Arabidopsis thalia... [more]
ATL3A_ARATH9.360e-2133.93RING-H2 finger protein ATL3A OS=Arabidopsis thalia... [more]
ATL2C_ARATH9.360e-2136.42Putative RING-H2 finger protein ATL2C OS=Arabidops... [more]
ATL3B_ARATH2.085e-2037.96RING-H2 finger protein ATL3B OS=Arabidopsis thalia... [more]
ATL4K_ARATH1.352e-1956.94RING-H2 finger protein ATL4K OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G08-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692726 ID=EY692726; Name=EY692726; organism=Citrus sinensis; type=EST; length=844bp
CCACGCGTCCGGAAACCCCATCTCACAGAATCTCTCCAAAAACTTTTCAT
TTTCTTCCAAAAAAGAAAGGGAAAAAAAAAAAAAAAGAACACCAGCGGCA
GACATGGGCGTTTTCGAGCCCCCATCACAAATCTCCGTCTGGGTTTCTTT
CCTCATCGTCATCCTGATTACGCCTTCTCTCGCGGATAATCACGATTCGA
GAACAACAAACAACAACTCATTATGCCCCCCTCCTTTCATTCAAGATAAA
GCAAATGCAAATGCAAATAAGAATTTCTCACCATTTAAGCCGAGCATGGC
AGTCGTAGTTGGTGTTTTAACCACCATGTTCTCTATGACTTTCCTTCTGT
TACTCTACGCCAAGCACTGCAAGCGTGGAAACAGCGTCGTCGGTTACGGT
ACTAGTCACTCCGCTCTGATAAATCCATCCTCCACCAATCGCAAGAACTC
AGGGATTGACCGTACGGTGATCGAGTCGTTACCGATATTCAGATTCGGTG
CACTCAGGGGTCACAAGGACGGGCTCGAATGCGCTGTTTGCTTGACTAGG
TTCGAGCCAACGGAAGTTTTAAGACTCTTGCCCAAATGCAAGCACGCCTT
CCACGTGGAGTGTGTTGATACTTGGCTCGACAGTCACTCTACTTGCCCTC
TTTGTCGATACCGAGTTGACCCTGAAGATATTCTTCTCAGCTTTGAAAAG
ATATGGACTCCGCTGAGTCGGAGGCCGNGCACCCGAGCCCACCCGACCAC
CCCGAGTTTGACGAGTTCCGGGAGGCACTCTACTTGGGAGGTCGGTTCGT
GTCTAAAATCGACTCGTCTAGGAGTCGCTTGAGGGGCTTTTCAA
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