EY692723

Overview
NameEY692723
Unique NameEY692723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692723 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.956e-18
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 1
Query:  109 LDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPXRCNKIGVSTKDGVRRLLLVGDHE 555
            + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+ IG  + D  +  L + D+E
Sbjct:   51 ISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of EY692723 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.713e-16
Identity = 58/161 (36.02%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  103 PVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPXRCNKIGVSTKDGVRRLLLVGD 549
            PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L + D
Sbjct:   54 PVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
The following BLAST results are available for this feature:
BLAST of EY692723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC6.956e-1837.1821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.713e-1636.02Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-G05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692723 ID=EY692723; Name=EY692723; organism=Citrus sinensis; type=EST; length=960bp
CCACGCGTCCGCGCAGCCTCTATTGGGCATCTCATCAAACTCTGAACCTG
TCTTAGATATCATTGGCAACAAGGTCAAATCCACCCTCGAGTATAAACTT
ATCCAGTCCTAGATGGCGCCGGTGGATTCAGCACACACCTAGGCACAAAT
GGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTCCTAGCGAAAGGGG
AGATAATTTAAGATTACTTCCGTACGACAATTACAAAATTGTCAAGGTAT
CCACTGATGTCAACCTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCTGT
AATGAAGAACCATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTGT
AACCGGCGGAAGTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGGT
TTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATATT
GTCCATTGTCCGAGTGTCTGTCTATCTTGTCCTANACGCTGCAACAAAAT
TGGCGTTTCAACTAAGGATGGCGTTCGACGTCTGCTTCTAGTTGGTGATC
ATGAACCGGCTTTGAATGTTCTGTTTTTTCCATCAGAGGAAAGCTCAAGG
CTACTTCAAGCTGCTAACGCAATATCAAGGTTTTTTTGAAGCTGCTGAAG
CAATATCAATGACCCGCGTATGAATGAACTTAGCTGTATCATTCTAAAAT
ATAGACCANGCTAGTAACCTTTATCTCTATTACAGGNTAAAAATAACACC
GCCTGTGATCCTTTTGCTGTTGGTNAAAAAAAAAAAAAANNNAANAANNN
AAAAAANNNNNNNAAAAAAANNNNNNNNNANAAAANAAANNAAAATTTTA
AAAAAAAAAAAAAAANAAANNNGGAGGCGGGCCCCCCCTCTTTTTTTTNT
TTTTTTNNTTTTTTCTCCAACCCCCCGCGGGGAAAAAAAAAAAATTCCCC
CGTCTCTCTT
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