EY692660

Overview
NameEY692660
Unique NameEY692660
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 6.822e-59
Identity = 112/192 (58.33%), Postives = 133/192 (69.27%), Query Frame = 3
Query:  120 EREENPAEPPMEKVSEKIXXXXXXXXXXXXXXNEEPAAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL 695
            E+     E  MEK+SEKI               E+P + S+VKA IYR+FGRE+PVH+V GGGKPADVFLWR+KK+S  VLG ATAIWVLFEL EYHLL+L+CH           W+NAHT I K  P IPE+H+PEE FL VAS+ R ELN AF +LRSIA GRDLK FLM +  LW++SVVG W +FLTL
Sbjct:    6 EKSVPTEESLMEKISEKIHHHDSSSSSESEY--EKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTL 195          

HSP 2 Score: 26.5646 bits (57), Expect = 6.822e-59
Identity = 18/40 (45.00%), Postives = 19/40 (47.50%), Query Frame = 2
Query:  719 HIVPVLYEKXXXXXXXXXXXA*LR*-KTYAVFDAXVLSKI 835
            H VP+LYEK           A     K Y VFD  VLSKI
Sbjct:  204 HTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.855e-57
Identity = 108/193 (55.96%), Postives = 134/193 (69.43%), Query Frame = 3
Query:  141 EPPMEKVSEKIXXXXXXXXXXXXXXNEEP--------AAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL 695
            E  M+K+SEKI              +E+         +  SS+K+ +YRLFGRE+PVH+V GGGKPAD+F+W+NKK+S GVLGGATA WV+FEL EYHLLTL+CH           W+NA  FI K+PP IPEVH+PEEP LQ+AS  RIE+N  F+ LR IASGRDLK FL+AIA LWVLS++G   +FLTL
Sbjct:   24 ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTL 216          

HSP 2 Score: 24.6386 bits (52), Expect = 1.855e-57
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  748 EDQIDPXAEXGMIEIK 795
            ED++DP  E  MIE+K
Sbjct:  235 EDKVDPLGEKAMIELK 250          

HSP 3 Score: 23.0978 bits (48), Expect = 1.855e-57
Identity = 11/18 (61.11%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  794 KTYAVFDAXVLSKIQSSP 847
            K YAV D  VLSKI   P
Sbjct:  251 KQYAVLDEKVLSKIPLGP 268          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.495e-55
Identity = 107/192 (55.73%), Postives = 132/192 (68.75%), Query Frame = 3
Query:  120 EREENPAEPPMEKVSEKIXXXXXXXXXXXXXXNEEPAAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL 695
            E+  +  E  MEK+++KI              +E+P + S++KA IYRLFGRE+PVH+V GGG PADVFLWR+KK+SA VLG ATAIWVLFEL EYH L+LVCH            +NAH F+ K PP IPE+H+ EE FL + SA R ELN AF +LRSIA GRDLK FLM +  LW++SVVG W +FLTL
Sbjct:    6 EKSMHKEESLMEKIADKIHDHDSSSSSDSE--HEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTL 195          

HSP 2 Score: 23.8682 bits (50), Expect = 1.495e-55
Identity = 16/40 (40.00%), Postives = 18/40 (45.00%), Query Frame = 2
Query:  719 HIVPVLYEKXXXXXXXXXXXA*LR*KT-YAVFDAXVLSKI 835
            H VP+LYEK                K  Y VFD  VLSK+
Sbjct:  204 HTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 243          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 7.331e-55
Identity = 111/203 (54.68%), Postives = 134/203 (66.01%), Query Frame = 3
Query:  141 EPPMEKVSEKIXXXXXXXXXXXXXXNEEPAAQSS----VKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL-FI*LWFCCTLCLF 734
            E  MEK+SEKI                E  + SS    +K+ +YRLFGRERPVH+V GGGKPAD+F+W++KK+S GV GGAT  WVLFEL EYHLLTL+CH           W+NA  FI K+PP IPEVH+PEEP LQ+AS  RIE+N   + LR IASGRD+K FL AIA LWVLS++G    FLTL +I L    T+ LF
Sbjct:   24 ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLF 226          

HSP 2 Score: 23.8682 bits (50), Expect = 7.331e-55
Identity = 11/18 (61.11%), Postives = 11/18 (61.11%), Query Frame = 2
Query:  794 KTYAVFDAXVLSKIQSSP 847
            K YAV DA V SKI   P
Sbjct:  247 KQYAVLDAKVFSKIPRGP 264          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.162e-53
Identity = 104/202 (51.49%), Postives = 136/202 (67.33%), Query Frame = 3
Query:  141 EPPMEKVSEKIXXXXXXXXXXXXXXNEEP--AAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTLFI*LWFCCTLCLFSM 740
            E  +EK+ EKI              +++   ++ SS K+ IYRLFGRE+PVH+V GGGKPAD+FLWRNKK+S GVLG  TA WVLFELFEYHLL  +CH           W+NA TFI K+ P IPEVH+PE+P LQ+ S  RIE+N    +LR+IASG+D+K F++ IA LWVLS++G   +FLTLF    +  T+ LF++
Sbjct:    9 ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLF----YTATVLLFTI 206          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 6.653e-53
Identity = 111/209 (53.11%), Postives = 138/209 (66.03%), Query Frame = 3
Query:  114 MAEREENPAEPPMEKVSEKIXXXXXXXXXXXXXXNEEPAAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTLFI*LWFCCTLCLFSM 740
            MAE E    E  MEK+SEKI              +++ +A  S+K  IYRLFGRE+P+H++FGGGKPAD+FLWRNKK+S GVLG AT  W+LFEL EY+LLTL  H           W++A TFI K+P  IPEVH+PE+  LQ+AS  RIE+N  F VLR IASGRDLK FL+ IA LWVLS VG   +FLTL     +  T+ LF++
Sbjct:    1 MAE-EHKHEESIMEKISEKIHGHDDSSSSSSDSDDDKNSA--SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLI----YIATVLLFTI 202          

HSP 2 Score: 23.8682 bits (50), Expect = 6.653e-53
Identity = 16/40 (40.00%), Postives = 18/40 (45.00%), Query Frame = 2
Query:  725 VPVLYEKXXXXXXXXXXXA*LR*KT-YAVFDAXVLSKIQS 841
            +PVLYEK           A    K  Y  FD  VLSK+ S
Sbjct:  202 IPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMS 241          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.305e-40
Identity = 80/170 (47.06%), Postives = 110/170 (64.71%), Query Frame = 3
Query:  216 NEEPAAQSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTLFI*LWFCCTL 725
            +E+P +   + A IYR+FGRERP+H V GGGKPADV LWR+KK++ G+L   T IW+LF      LLT +C            W+NA   + K+P  + ++++PE+P LQ ASA   ELN AFA LRSIA  RD+K+F+MA+  LW++SV+G W  FL+L   L+ C  L
Sbjct:   38 SEKPDSPVPINAPIYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSL---LYICFVL 201          

HSP 2 Score: 25.0238 bits (53), Expect = 2.305e-40
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  748 EDQIDPXAEXGMIEIK 795
            ED+IDP AE  +IE+K
Sbjct:  213 EDEIDPIAEKAVIEMK 228          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.975e-33
Identity = 70/154 (45.45%), Postives = 96/154 (62.34%), Query Frame = 3
Query:  234 QSSVKADIYRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL 695
            + SV +   RLF R++P+H V GGGK ADV LWRNKKISA VL GATAIWVLFE   +H L+LVC+           W+NA  F+ ++   +P + LP++ F +V  A   E+N     L+ +A   +LK FLMA+  LWV ++VG   +FLT+
Sbjct:   35 EDSVSSRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTV 188          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.211e-26
Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 3
Query:  261 RLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL 695
            +LF R+R +H +FGGGK AD+ LWR  KI+A ++ G + +W L E+ EY+ +TL+CH           W+ A  F+    P IPEV L E  F Q+A +F +  N     L  +A GRD   F +   +L+++S++G + +F+ L
Sbjct:   22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNL 166          
BLAST of EY692660 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19
Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = 3
Query:  258 YRLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGKWVHFLTL 695
            YRL GR+  VHQ  GGGK AD+ LWR + +S GV+  +T  W++FE      L++               A    F  +    +PE+ L EE     A++FRI+LNH   +   +  G D + F   +  LW+LS +G ++   TL
Sbjct:   23 YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTL 168          
The following BLAST results are available for this feature:
BLAST of EY692660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
RTNLE_ARATH6.822e-5958.33Reticulon-like protein B5 OS=Arabidopsis thaliana ... [more]
RTNLA_ARATH1.855e-5755.96Reticulon-like protein B1 OS=Arabidopsis thaliana ... [more]
RTNLF_ARATH1.495e-5555.73Reticulon-like protein B6 OS=Arabidopsis thaliana ... [more]
RTNLB_ARATH7.331e-5554.68Reticulon-like protein B2 OS=Arabidopsis thaliana ... [more]
RTNLD_ARATH1.162e-5351.49Reticulon-like protein B4 OS=Arabidopsis thaliana ... [more]
RTNLC_ARATH6.653e-5353.11Reticulon-like protein B3 OS=Arabidopsis thaliana ... [more]
RTNLG_ARATH2.305e-4047.06Reticulon-like protein B7 OS=Arabidopsis thaliana ... [more]
RTNLH_ARATH2.975e-3345.45Reticulon-like protein B8 OS=Arabidopsis thaliana ... [more]
RTNLI_ARATH1.211e-2637.24Reticulon-like protein B9 OS=Arabidopsis thaliana ... [more]
RTNLP_ARATH1.098e-1933.56Reticulon-like protein B16 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692660 ID=EY692660; Name=EY692660; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGATTACACCGGACAGAACATCAGCTTTCTTTTCCCTTTCA
TTGTCCCTCGCACCGAAATTTCGCCAAAAAAAAAAAAAATTCAATTAGGT
TTTCCGAGAAAAGATGGCGGAGCGTGAAGAGAATCCGGCGGAACCGCCAA
TGGAGAAGGTAAGCGAGAAGATTCACGATCACGATTCCTCGTCATCGTCG
TCTTCGGATTCTGATAATGAGGAACCGGCTGCCCAGTCGTCTGTGAAGGC
GGATATTTATCGTTTATTTGGCAGAGAGCGGCCGGTTCACCAGGTTTTCG
GTGGTGGAAAGCCTGCTGATGTTTTTTTGTGGAGGAACAAGAAGATTTCA
GCGGGTGTACTAGGTGGAGCCACGGCTATCTGGGTCCTTTTCGAGTTGTT
TGAATACCACCTGCTTACTTTGGTCTGCCACACCTTAATTCTTGCACTTG
CAATCTTGTTCCTGTGGGCCAATGCCCATACCTTCATTAAGAAGGCCCCA
CCCTGCATCCCTGAAGTTCATCTTCCTGAGGAGCCATTCCTGCAGGTTGC
TTCTGCCTTTAGGATTGAACTCAACCATGCTTTTGCAGTATTGCGGAGTA
TTGCATCAGGAAGAGATTTGAAGAGTTTTCTCATGGCTATAGCTGCCTTG
TGGGTGCTGTCAGTTGTGGGGAAGTGGGTGCACTTCTTGACCTTGTTTAT
ATAGCTTTGGTTTTGCTGCACATTGTGCCTGTTCTCTATGAGAAGTTGAG
GACCAGATTGATCCTTNAGCTGAGAANGGCATGATTGAGATAAAAAACAT
ATGCAGTATTTGATGCCANGGTTTTGAGTAAGATTCAGTCAAGCCCAGAG
GTTAAACCAGTGAGCTATTTATTNTG
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