EY692655

Overview
NameEY692655
Unique NameEY692655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig75 contig Csv1_Contig75:109..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX5_ARATH (Probable glutathione peroxidase 5 OS=Arabidopsis thaliana GN=GPX5 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.010e-66
Identity = 115/161 (71.43%), Postives = 139/161 (86.34%), Query Frame = 1
Query:    7 VRQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 489
            V +KSI++FTVKDS GK+VDLS+Y+GKVLL+VNVASKCGFT+SNY+QLT+LY KYK +G  +LAFPCNQFL QEPGTS+EAH+FACTR+KAEYP+FQKVRVNG NA P+YKFLK+ K  + GSRIKWNFTKFLV  +G VI RY  T SP++I+ DI+ AL
Sbjct:    9 VSEKSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKFLKSKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIEKAL 169          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_ARATH (Probable glutathione peroxidase 4 OS=Arabidopsis thaliana GN=GPX4 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.241e-65
Identity = 117/163 (71.78%), Postives = 139/163 (85.28%), Query Frame = 1
Query:    7 VRQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALGD 495
            V ++S+++FTVKDS GKD+++SIY+GKVLLIVNVASKCGFT++NY+QLT+LY KYK +  EILAFPCNQFL QEPGTSQEAHEFAC R+KAEYP+FQKVRVNG NA P+YKFLKASK  + GSRIKWNFTKFLV  +G VI RY    +P++IE DIK AL D
Sbjct:    7 VPERSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKASKPTFLGSRIKWNFTKFLVGKDGLVIDRYGTMVTPLSIEKDIKKALED 169          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.970e-63
Identity = 111/159 (69.81%), Postives = 135/159 (84.91%), Query Frame = 1
Query:   16 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            KS++EF V+D++G DVDLSIYKGKVLLIVNVAS+CG T+SNY+++T+LY KY+  GLEILAFPCNQF  QEPG+++E  EFACTR+KAEYPIF KV VNG NA P+YKFLK+SK G FG  +KWNFTKFLVD +GNV+ RY+PTTSP +IE D+K  LG
Sbjct:   10 KSVHEFVVRDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTEMTELYEKYRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKGGLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLLG 168          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.970e-63
Identity = 113/161 (70.19%), Postives = 134/161 (83.23%), Query Frame = 1
Query:   10 RQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            + +SIY+FTVKD+KG DVDLSIYKGKVL+IVNVAS+CG T+SNY+ LT++Y KYK +GLEILAFPCNQF  QEPG+ +E     CTR+KAEYPIF KV VNG NA PLYKFLK+SK G+FG  IKWNF+KFLVD EGNV+ RYSPTT+P ++E DIK  LG
Sbjct:    7 KPQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLG 167          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.771e-63
Identity = 112/161 (69.57%), Postives = 134/161 (83.23%), Query Frame = 1
Query:   10 RQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            + +SIY+FTVKD+KG DVDLSIYKGKVL+IVNVAS+CG T+SNY+ +T++Y KYK +GLEILAFPCNQF  QEPG+ +E     CTR+KAEYPIF KV VNG NA PLYKFLK+SK G+FG  IKWNF+KFLVD EGNV+ RYSPTT+P ++E DIK  LG
Sbjct:    7 KPQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDMTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLG 167          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.970e-62
Identity = 112/159 (70.44%), Postives = 132/159 (83.02%), Query Frame = 1
Query:   16 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            KS+Y+FTVKD+KG DVDLSIYKGKVLLIVNVAS+CG T+SNY++L  LY KYK  G EILAFPCNQF  QEPGT++E  +FACTR+KAEYPIF KV VNG  A P+YKFLK+SK G FG  IKWNF KFLVD +GNV+ R++PTTSP++IE D+K  LG
Sbjct:   71 KSLYDFTVKDAKGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLLG 229          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_SOLLC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum GN=GPXle-1 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.970e-62
Identity = 110/159 (69.18%), Postives = 134/159 (84.28%), Query Frame = 1
Query:   16 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            +S+Y+FTVKD+KGKDVDLSIYKGKVL+IVNVAS+CG T+SNY+ +T+LY KYK +GLEILAFPCNQF  QEPG  ++  +  CTR+KAEYPIF KV VNG NA PLY+FLK+SK G+FG  IKWNF+KFL+D EG+V+ RYSPTTSP ++E DIK  LG
Sbjct:    9 QSVYDFTVKDAKGKDVDLSIYKGKVLIIVNVASQCGLTNSNYTDMTELYKKYKDQGLEILAFPCNQFGGQEPGNIEDIQQMVCTRFKAEYPIFDKVDVNGDNAAPLYRFLKSSKGGFFGDGIKWNFSKFLIDKEGHVVDRYSPTTSPASMEKDIKKLLG 167          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.389e-62
Identity = 111/157 (70.70%), Postives = 136/157 (86.62%), Query Frame = 1
Query:   19 SIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNAL 489
            S+++FTVKD+KG+DVDLSIYKGK+LLIVNVAS+CG T+SNY++L+ LY+KYK++GLEILAFPCNQF  QEPG +++  EFACTR+KAE+PIF KV VNG NA PLYK LK+SK G FG  IKWNF+KFLVD EGNV+ RY+PTTSP++IE DIK  L
Sbjct:    8 SVHDFTVKDAKGQDVDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 164          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_GOSHI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.732e-62
Identity = 113/162 (69.75%), Postives = 135/162 (83.33%), Query Frame = 1
Query:   10 RQKSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEA-HEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            + +SIY+FTVKD+KG DVDLSIYKGKVL+IVNVAS+CG T+SNY+ LT++Y KYK +GLEILAFPCNQF  QEPG+ +E+     CTR+KAEYPIF KV VNG NA PLYKFLK+SK G+FG  IKWNF+KFLVD EGNV+ RYSPTT+P ++E DIK  LG
Sbjct:    7 KPQSIYDFTVKDAKGNDVDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEESIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLLG 168          
BLAST of EY692655 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.845e-61
Identity = 111/159 (69.81%), Postives = 132/159 (83.02%), Query Frame = 1
Query:   16 KSIYEFTVKDSKGKDVDLSIYKGKVLLIVNVASKCGFTDSNYSQLTDLYNKYKHKGLEILAFPCNQFLKQEPGTSQEAHEFACTRYKAEYPIFQKVRVNGPNAEPLYKFLKASKTGYFGSRIKWNFTKFLVDTEGNVIGRYSPTTSPMAIEGDIKNALG 492
            KSI++F VKD++G DVDLSIYKGKVLLIVNVAS+CG T+SNY +LT LY +YK KGLEILAFPCNQF  QEPG +++  EFACTR+KAE+PIF KV VNG NA P+YK+LK+SK G FG  IKWNFTKFLVD +G V+ RY+PTTSP +IE DIK  +G
Sbjct:   10 KSIHDFIVKDARGNDVDLSIYKGKVLLIVNVASQCGLTNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDVNGSNAAPVYKYLKSSKGGLFGDGIKWNFTKFLVDRDGKVVDRYAPTTSPASIEKDIKKLIG 168          
The following BLAST results are available for this feature:
BLAST of EY692655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPX5_ARATH5.010e-6671.43Probable glutathione peroxidase 5 OS=Arabidopsis t... [more]
GPX4_ARATH4.241e-6571.78Probable glutathione peroxidase 4 OS=Arabidopsis t... [more]
GPX4_SPIOL3.970e-6369.81Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_NICSY3.970e-6370.19Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_TOBAC6.771e-6369.57Probable phospholipid hydroperoxide glutathione pe... [more]
GPX6_ARATH1.970e-6270.44Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_SOLLC1.970e-6269.18Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_CITSI4.389e-6270.70Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_GOSHI5.732e-6269.75Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_MESCR2.845e-6169.81Probable phospholipid hydroperoxide glutathione pe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692655 ID=EY692655; Name=EY692655; organism=Citrus sinensis; type=EST; length=786bp
CCACGCGTCCGACAGAAATCAATCTACGAGTTCACTGTCAAGGATAGCAA
GGGCAAGGACGTGGACCTTAGCATTTACAAAGGCAAGGTTCTTTTGATTG
TTAACGTTGCCTCCAAATGTGGTTTTACGGATTCAAATTACTCCCAGTTG
ACTGATCTTTATAACAAATACAAGCATAAAGGTTTGGAGATCTTGGCATT
TCCGTGCAACCAATTTTTGAAGCAAGAGCCTGGGACAAGTCAGGAGGCTC
ACGAATTTGCATGTACTAGATACAAGGCTGAATATCCAATCTTTCAAAAG
GTACGCGTCAATGGTCCAAATGCGGAACCTCTATATAAATTTCTCAAAGC
AAGTAAAACTGGATACTTTGGGTCCAGAATAAAGTGGAACTTCACCAAGT
TTTTAGTTGATACAGAAGGAAATGTCATCGGGCGTTATAGCCCAACCACT
TCTCCGATGGCAATTGAGGGTGACATAAAGAATGCACTGGGAGATGTTTA
GGAGATTTCTGGGTGACTAGTCATTCCTGTGCAAGACATGATATAATAGT
GTATGTACAATGAGTGTTGTAGCTGTTTTGATTGTCCTATATTTTCTGTT
TTATCACTATGTTTTAATTATTTAACTTTTTTTTTTTTGGTTTTATTTAT
TCCGAGAGCAAATATGTGTCTAGAGTATAATGTAATCGATTTATTTCTGT
ATTTCGGTACTCTCAGATTGAAAGACTAGTAGTTTTGTAATATTAATATA
TTATTGTTGTTGGTTTTAAAAAAAAAAAAAAAAAAA
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