EY692650

Overview
NameEY692650
Unique NameEY692650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length959
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692650 vs. ExPASy Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.215e-15
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  326 PAMRFGGQILYSRTSTEVEMSAIELRRILEANKSEAGQAVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHWYVMQIIH-SGIPXSLQLLLEDSTIXKVGVGIGSDACKVYRDYNVSVKASEDLSYLANIRL 718
            P M+F G I+YS  S +  + + ++R  L        + V+GFDIEW P + KG    K A++Q+C      Y+  I   +G P  L+ LLED ++ KVGVGI  D  K+  DY + +K   +LS +AN +L
Sbjct:   39 PFMKFNGSIVYSYESNDCSLLSEDIRSSL------LEEDVLGFDIEWPPVYTKGKTG-KVALIQVCVSEKKCYLFHISPMAGFPKGLKRLLEDESVRKVGVGIEGDQWKLMSDYELKLKGFIELSEMANQKL 163          
BLAST of EY692650 vs. ExPASy Swiss-Prot
Match: WRN_MOUSE (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus GN=Wrn PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.494e-12
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 2
Query:  326 PAMRFGGQILYSRTSTEVEMSAIELRRILEANKSEAGQAVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHWYVMQIIHSGI-PXSLQLLLEDSTIXKVGVGIGSDACKVYRDYNVSVKASEDLSYLANIRL 718
            P + F G I+YS  +++    + ++   L          VVGFD+EW P ++ G   R  AV+Q+C   N  Y+  I    + P  L++LLE+ +I K GVGI  D  K+ RD++V +++  +L+ +AN +L
Sbjct:   39 PFLEFPGSIVYSYEASDCSFLSEDISMRLSDGD------VVGFDMEWPPIYKPGKRSR-VAVIQLCVSENKCYLFHISSMSVFPQGLKMLLENKSIKKAGVGIEGDQWKLLRDFDVKLESFVELTDVANEKL 163          
BLAST of EY692650 vs. ExPASy Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.346e-12
Identity = 41/132 (31.06%), Postives = 72/132 (54.55%), Query Frame = 2
Query:  326 PAMRFGGQILYSRTSTEVEMSAIELRRILEANKSEAGQAVVGFDIEWKPTFRKGVLPRKAAVMQICGDSNHWYVMQIIHSGI-PXSLQLLLEDSTIXKVGVGIGSDACKVYRDYNVSVKASEDLSYLANIRL 718
            P + F G I+YS  +++    + ++   L          VVGFD+EW P + +G L  K A++Q+C   +  Y+  +    + P  L++LLE+  + K GVGI  D  K+ RD+++ +K   +L+ +AN +L
Sbjct:   45 PFLEFTGSIVYSYDASDCSFLSEDISMSLSDGD------VVGFDMEWPPLYNRGKL-GKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAGVGIEGDQWKLLRDFDIKLKNFVELTDVANKKL 169          
The following BLAST results are available for this feature:
BLAST of EY692650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
WRN_XENLA3.215e-1537.12Werner syndrome ATP-dependent helicase homolog OS=... [more]
WRN_MOUSE1.494e-1233.33Werner syndrome ATP-dependent helicase homolog OS=... [more]
WRN_HUMAN4.346e-1231.06Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-003-A02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692650 ID=EY692650; Name=EY692650; organism=Citrus sinensis; type=EST; length=959bp
CCACGCGTCCGATCCAAATTTTGTCTTTGAAATTTCGCACTCCCTCCAAT
TTATACCCAAAATGGAAAAGAAGTCGGTAGAAACAGAAGGGGACGACGAT
GAGCCCATCACGGAACAGGAACTCGAAATCGTTGAAGCAATAGAAGCCGC
ATATGAACTGTCAATCACAAGGAAAAGACAATTAAGTCCTCCTGTTCATA
ACAATCATACCCATCGCCCCATGTCCATAACTTCCCGCCGGTTGCCCTCT
TCACTTGTTGCTTCGCCTTCTTCACCTTCGTTTTCTCTATCACATTGCCA
AGGAGCTAACATGAGGTTGAAATACCCTGCAATGAGGTTTGGAGGTCAAA
TTTTGTATAGCAGAACTTCAACAGAGGTAGAGATGTCCGCAATAGAGCTT
CGACGGATTCTTGAAGCTAATAAAAGTGAAGCAGGTCAGGCCGTTGTTGG
ATTTGACATTGAGTGGAAGCCCACTTTCAGAAAAGGTGTTTTACCAAGAA
AAGCTGCAGTTATGCAGATATGCGGAGACAGCAACCATTGGTATGTCATG
CAAATTATTCATTCAGGAATCCCTNCGAGCCTGCAACTGCTACTTGAAGA
TTCTACAATTNTAAAAGTTGGAGTTGGGATAGGCAGTGATGCNTGTAAAG
TTTACAGAGACTATAATGTATCTGTCAAAGCTTCTGAAGATCTTTCCTAT
CTAGCAAACATAAGATTGGCNGGGATAGTCAAAAATGGGGTCTGCATCAC
TGACCGAGATCCTTGTTTGCAGGGAGCTAAGAAGNCCATAAAATCAACTG
GGAAATTGGGAAGCAATGGTTTATCAAAGACAGCTTCTGTTTGCCGNACA
GATGCTTTGCTTCTGGCTTCTTATAGGTGTAAGGACCTACCCAGCCGTTA
AAATCTCTGCCAGGAAATCAAAAGTTCAAATTACCTGCCAATGCTAAAAG
AANTTATAT
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