EY692649

Overview
NameEY692649
Unique NameEY692649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2E_ARATH (Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana GN=At2g44680 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 8.360e-69
Identity = 148/247 (59.92%), Postives = 166/247 (67.21%), Query Frame = 2
Query:  203 MYRDR-------GGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQLDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGN---PXXLSVIRHPSFSTVK-YTVQMGRIYY 910
            MY+DR       GGG+S+SEI+ G +DRKRINDALDKHL+K+SPSTSR  +SKDK+  SVPSTS  KSQL  R     S   ++                        WISWFCNLRGNEFFCEVD++YIQDDFNLCGLS QVPYYDYALDLILDVESS+GDMFTEEQ+E+VESAAEML GLIHVRYILT+KGMA M  KYK  D G CP     G    P   S I  P  STVK Y  +   IYY
Sbjct:    1 MYKDRSGGGIMGGGGSSRSEILGGAIDRKRINDALDKHLKKSSPSTSRVFTSKDKD--SVPSTSTAKSQLHSRSPDVESDTDSE-----------GSDVSGSEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNGDMFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSCLPVGQSDI--PRSSTVKIYCPKCEDIYY 232          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_ARATH (Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.994e-62
Identity = 140/245 (57.14%), Postives = 158/245 (64.49%), Query Frame = 2
Query:  203 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSA---GKSQ---LDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXX-WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP-XXLSVIRHPSFSTVK-YTVQMGRIYY 910
            MYRDRG   S+ E+V    DRKRINDAL    E+ SPSTSR ++ K K  ++  +T+A   GK Q   ++HRDSRSASL KN                          WISWFCNLRGNEFFCEVDD+YIQDDFNLCGLSS VPYY+YALDLILDVESS G+MFTEEQNEL+ESAAEML GLIH RYILTSKG+A M  KYK  D G CP     G P   +     P  STVK Y  +   IYY
Sbjct:    1 MYRDRGTVNSRPEVV----DRKRINDAL----ERPSPSTSRQVNGKGKGTVTAATTTANLIGKQQSNNINHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSLVPYYEYALDLILDVESSQGEMFTEEQNELIESAAEMLYGLIHARYILTSKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDLPRSSTVKIYCPKCEDIYY 237          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2D_ARATH (Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 7.093e-60
Identity = 132/235 (56.17%), Postives = 156/235 (66.38%), Query Frame = 2
Query:  203 MYRDR----GGGASKSEIVAGPLDRKRINDALDKHLEK--TSPSTSRALSSKDKERLSVPSTSAGKSQLDHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXXWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGN---PXXLSVIRHPSFSTVK 880
            MY++R    GGG+S+SEI+ G +DRKRINDAL+K LEK  TS +TSR  SSKDK+  S  ST   K+QL   +S + S   +                         WISWFCNLRGN+FFCEVD++YIQDDFNLCGLS QVPYYDYALDLILDV++S+ +MFT+EQ+E+VESAAEML GLIHVRYILT+KGMA M  KYK  D G CP     G    P   S I  P  STVK
Sbjct:    1 MYKERSGGGGGGSSRSEILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSFTST---KTQLPDVESETDSEGSD---------------VSGSEGDDTSWISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASNSEMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSCLPVGQSDI--PRSSTVK 215          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2C_ARATH (Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 2.136e-56
Identity = 128/241 (53.11%), Postives = 145/241 (60.17%), Query Frame = 2
Query:  203 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQL-DHRDSRSASLPKNKCXXXXXXXXXXXXXXXXXXXXXXX--WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP-XXLSVIRHPSFSTVK-YTVQMGRIYY 910
            MYR+RG   SKSE+V    DRKRIN+  D       PS S +     K +++  S   GK QL D   SRS S+ K                            WISWFCNLRGNEFFCEVDD+YIQDDFNLCGLS QVPYYDYALDLILDVESSHG+MFTEEQNEL+ESAAEML G+IH R+ILTSKG+A M  KYK  D G CP     G P   +     P  STVK Y  +   +YY
Sbjct:    1 MYRERGMVGSKSEVV----DRKRINEIHDNR-----PSHSMSQPVNGKGKVTSTSVLMGKQQLHDKESSRSGSISKTNISDAVDISDTDSEESEVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSHQVPYYDYALDLILDVESSHGEMFTEEQNELIESAAEMLYGMIHARFILTSKGLASMLDKYKNYDFGRCPRVYCCGQPCLPVGQSDIPRASTVKIYCPKCEDVYY 232          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_XENLA (Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP 835
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+ILD+E          Q++L+E AAEML GLIH RYILT++G+A M  KY+  D G CP       P
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQP 118          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_RAT (Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP 835
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+ILD+E          Q++L+E AAEML GLIH RYILT++G+A M  KY+  D G CP       P
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQP 118          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_RABIT (Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP 835
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+ILD+E          Q++L+E AAEML GLIH RYILT++G+A M  KY+  D G CP       P
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQP 118          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_PIG (Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP 835
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+ILD+E          Q++L+E AAEML GLIH RYILT++G+A M  KY+  D G CP       P
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQP 118          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_MOUSE (Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP 835
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+ILD+E          Q++L+E AAEML GLIH RYILT++G+A M  KY+  D G CP       P
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQP 118          
BLAST of EY692649 vs. ExPASy Swiss-Prot
Match: CSK2B_HUMAN (Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.056e-31
Identity = 64/110 (58.18%), Postives = 77/110 (70.00%), Query Frame = 2
Query:  506 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLDGLIHVRYILTSKGMACMXXKYKTMDLGECPEYTAVGNP 835
            WISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y  ALD+ILD+E          Q++L+E AAEML GLIH RYILT++G+A M  KY+  D G CP       P
Sbjct:    9 WISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQP 118          
The following BLAST results are available for this feature:
BLAST of EY692649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CSK2E_ARATH8.360e-6959.92Putative casein kinase II subunit beta-4 OS=Arabid... [more]
CSK2B_ARATH1.994e-6257.14Casein kinase II subunit beta OS=Arabidopsis thali... [more]
CSK2D_ARATH7.093e-6056.17Casein kinase II subunit beta-3 OS=Arabidopsis tha... [more]
CSK2C_ARATH2.136e-5653.11Casein kinase II subunit beta' OS=Arabidopsis thal... [more]
CSK2B_XENLA4.056e-3158.18Casein kinase II subunit beta OS=Xenopus laevis GN... [more]
CSK2B_RAT4.056e-3158.18Casein kinase II subunit beta OS=Rattus norvegicus... [more]
CSK2B_RABIT4.056e-3158.18Casein kinase II subunit beta OS=Oryctolagus cunic... [more]
CSK2B_PIG4.056e-3158.18Casein kinase II subunit beta OS=Sus scrofa GN=CSN... [more]
CSK2B_MOUSE4.056e-3158.18Casein kinase II subunit beta OS=Mus musculus GN=C... [more]
CSK2B_HUMAN4.056e-3158.18Casein kinase II subunit beta OS=Homo sapiens GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H11-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692649 ID=EY692649; Name=EY692649; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGCTCAAATCAAATCTAGGGTTTCCCGTCTCCATCCCAAAA
AAAGTGTCCTTTAAAGTAAAAAGTCCTTAATTTACGTAATCCATATACAG
GTTTTTCTATGTGAAGTATCAAAGGTGGAATCTTTGGGAGTTTAGGGTTC
TGAAATTGGAAAAGGAAAAAAGAAAATCAAGTAAAAAAGAATTGGGGCAG
CTATGTATAGAGATCGAGGAGGAGGGGCGTCGAAGTCGGAGATAGTGGCA
GGACCGTTGGATCGAAAGCGCATAAACGATGCGCTGGACAAGCATTTAGA
GAAGACATCCCCTTCTACTTCGAGGGCCTTGAGTTCTAAAGACAAGGAGA
GGTTGTCCGTACCTTCCACTTCTGCCGGTAAATCGCAGCTCGATCACCGC
GATTCTCGCTCCGCCTCTCTCCCCAAGAACAAATGCTCTGATGAGGAATC
TGAAACAGACAGTGAAGAATCTGATGTTAGCGGTTCTGATGGAGATGACA
CATCTTGGATCTCATGGTTTTGCAATTTGCGAGGAAATGAATTTTTCTGT
GAAGTTGATGATGAGTACATCCAAGATGATTTTAATCTTTGTGGGTTGAG
CAGTCAAGTTCCATACTATGATTATGCTCTTGATTTGATATTGGATGTTG
AATCTTCTCATGGTGATATGTTCACTGAAGAACAGAATGAACTGGTGGAA
TCAGCAGCAGAGATGCTGGATGGTCTGATTCATGTACGGTACATCCTTAC
TAGCAAGGGAATGGCTTGCATGNTANAGAAGTACAAAACTATGGATTTGG
GAGAATGCCCAGAGTATACTGCTGTGGGCAACCCTGNCTTNCTGTCNGTA
ATCAGACATCCCTCGTTCAGTACTGTTAAATATACTGTCCAAATGGGAAG
AATATATTATCTCGGNCCAGTACAAAGCATATCGATGGGCT
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