EY692648

Overview
NameEY692648
Unique NameEY692648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 2.494e-67
Identity = 136/249 (54.62%), Postives = 171/249 (68.67%), Query Frame = 3
Query:    3 TRPELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQYLKKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVRGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVV 749
            T  ELL HFL   +E++Q  A  L+ EI S+EADI+E+ +R+    P   PSL              E+ SSS    SP S   EMRL+RN++QLE AYF+ R    L ++    R D DLLR+ +N     ++ E  +  DR+GAFFDGLCKYARYSKFE RG+LRT E NN++NVICS+ FDRDED+FA AGVSKKIKI+EFN+LFN+S   +YPA+EM NRSKLS VCWNNYI+NYL S+DYDG+V
Sbjct:  570 TESELLQHFLFLSQEKRQKHAGNLMEEIASVEADIEEIVKRRCAIGP---PSL--------------EEASSS----SPASSVPEMRLIRNINQLESAYFAARIDAHLPEARYRLRPDRDLLRNSDNTVAEVENSETWSSDDRVGAFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIV 797          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.850e-62
Identity = 134/252 (53.17%), Postives = 171/252 (67.86%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQYLKKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNP----TDRLGAFFDGLCKYARYSKFEVRGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVVXV 755
            ELLLHFL SLE +K+ +ASKL+ +IQ+LE DIKE ERR      LV      E     ++   +E  ++S A   P   AN  RLM N+ QLE AYF MRSQI LS S +T R+D  L +DR+     Q + +  +     +D+L  FF+GLCK+ARYSKFE  G +R+G+  NSA+V+CS+SFD DE+H AAAG+SKKIKIF+FNA  N+S   +YP VEM N+SKLSCVCWN+YIKNYL S DYDGVV +
Sbjct:  546 ELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAERRYSSNVSLVRSHGAIEKRV--QSSPLDEHCTTSSALFVPT--ANTDRLMSNIRQLEDAYFFMRSQINLSSSAATARSDKTL-KDRDRCSENQNENQDMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQI 792          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.335e-36
Identity = 94/275 (34.18%), Postives = 150/275 (54.55%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQYL--------------KKPLVDPSLQNESAPSRENRYFNEQLSSSEAQLSPISDANEMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDLLR----------DRENLFLAQQDQEIQNPTDRLG---AFFDGLCKYARYSKFEVRGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVVXV 755
            ELLL FL  +++ KQ  A KL   I  L +DI +V +RQ +              +K +   +    +    ++   +E+    +   S + +++  RLMRNL +LE  YF+ R +       + T A+  L R            E   ++Q  ++  N + + G    F +GLCKY  +SK  V+  L+ G+  NS+N++C+I FDRD + FA AGV+KKIKIFE  ++  D R  +YP VE+++RSKLS +CWN+YIK+ + S++++GVV V
Sbjct:  292 ELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKGRDVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESS--RLMRNLKKLESVYFATRYR----QIKAATAAEKPLARYYSALSCNGRSSEKSSMSQPSKDPINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQV 560          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.632e-34
Identity = 95/292 (32.53%), Postives = 157/292 (53.77%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQYLKKP----LVDPSLQNESAPSRE---NRYFNEQLSS----------------------SEAQLSPISDANEMRLMRNLSQLERAYF-SMRSQIQLSDSDSTTRADNDLLRDR-ENLFLAQQDQEIQNPT---------DRLGA----FFDGLCKYARYSKFEVRGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVVXV 755
            E LL FL+ +++ KQ  A +L   +  L +DI++V +RQ + K     L D S  +    S +   +   NE+ S+                       E+Q S + +++  RLMRN  +LE  YF + R Q++ + S  +    + L  +      +  +   + NP           R G     F +GLC+Y  +S+  V+  L+ G+  NS+N++C+++FDR+ + FA AGV+KKIKIFE N++ ND+R  +YP VE++ RSKLS +CWN+YIK+ + S+++DGVV +
Sbjct:  321 ESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRGSSLSDFSKDDHQYTSGQPLMSFQANEEPSAFLASRKRVRQGILALENGVEVDEESQGSTLLESS--RLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQI 610          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.523e-27
Identity = 83/285 (29.12%), Postives = 143/285 (50.18%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQ---YLKKPLVDPSLQN-ESAPSRENRYFNEQLSSSEAQLSPI------SDANEMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDL-----------LRDRENLFLAQQDQEIQNPTDR----------------LGAFFDGLCKYARYSKFEVRGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVVXV 755
            ++LL FL  L ++K ++  ++  ++Q ++ DI  VE+ +   Y  +      L+  + +  R++R+ +  L+SS    SP+      S  +  +     SQ+      ++ +  ++ SDS     + L             D +  +L ++ Q    P  +                L  F   L  + RYS+  V   +R G+  +SAN++ SI FDRD+D FA AGVS++IK+F+F+A+ N+    + P VEM+ RSKLSC+ WN Y KN + S+DY+G+V V
Sbjct:  160 QILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKYAKNQIASSDYEGIVTV 444          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 8.116e-26
Identity = 86/297 (28.96%), Postives = 144/297 (48.48%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVER----------RQYLKKPLV--DPSLQNESAPSRENRYFN----------------------------------EQLSSSEAQL---SPISDANEMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVRGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVVXV 755
            ++LL FL  L ++K ++ +++  ++Q ++ DI  VER          R  +K  ++  DPS +N     +    FN                                  + LS S++Q    S +S A + R+    + L+  Y   R Q  L+D  ++ + ++  +  RE              ++ L  F   L  + RYS+  V   +R G+  +SAN++ SI FDRD++ FA AGVS+ IK+F+F+++ N+      P VEMS RSKLSC+ WN + KN++ S+DY+G+V V
Sbjct:  165 QILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQKRRQ--LADQPNSKQENDKSVVRREGY------------SNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTV 447          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: RFWD2_HUMAN (E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.692e-23
Identity = 77/261 (29.50%), Postives = 124/261 (47.51%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQYLKKPLVDPSLQNE---SAPSRENRYFNEQLS-------SSEAQLSPISDAN----EMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVRGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVV 749
            ++L+ FL      K+ Q  ++  E+  LE DIK VE    L  P+ + S   +    +PS  +   + + S       SS+ +  P  ++       RL  +   LE+ YFS R   ++SD   T                            +L  F + L K+ RY+       L    +  N ++++ SI FDRD D+FA AGV+KKIK++E++ +  D+   +YP  EM+  SK+SC+ W++Y KN L S+DY+G V
Sbjct:  262 QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMS-RISDDSRTA--------------------------SQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 495          
BLAST of EY692648 vs. ExPASy Swiss-Prot
Match: RFWD2_MOUSE (E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.924e-23
Identity = 76/261 (29.12%), Postives = 123/261 (47.13%), Query Frame = 3
Query:   12 ELLLHFLISLEEEKQNQASKLVGEIQSLEADIKEVERRQYLKKPLVDPSLQNE---SAPSRENRYFNEQLS-------SSEAQLSPISDAN----EMRLMRNLSQLERAYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARYSKFEVRGMLR-TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSR*CYYPAVEMSNRSKLSCVCWNNYIKNYLGSADYDGVV 749
            ++L+ FL      K+ Q  ++  E+  LE DIK VE    L  P+ + S   +    +PS  +   + + S       +S+ +  P  ++       RL  +   LE+ YFS R   ++SD   T                            +L  F + L K+ RY+       L    +  N ++++ SI FDRD D+FA AGV+KKIK++E+  +  D+   +YP  EM+  SK+SC+ W++Y KN L S+DY+G V
Sbjct:  264 QILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGTSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMS-RISDDSRTA--------------------------SQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 497          
The following BLAST results are available for this feature:
BLAST of EY692648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SPA2_ARATH2.494e-6754.62Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=... [more]
SPA1_ARATH1.850e-6253.17Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis th... [more]
SPA4_ARATH1.335e-3634.18Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=... [more]
SPA3_ARATH1.632e-3432.53Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=... [more]
COP1_PEA2.523e-2729.12E3 ubiquitin-protein ligase COP1 OS=Pisum sativum ... [more]
COP1_ARATH8.116e-2628.96E3 ubiquitin-protein ligase COP1 OS=Arabidopsis th... [more]
RFWD2_HUMAN1.692e-2329.50E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens ... [more]
RFWD2_MOUSE4.924e-2329.12E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692648 ID=EY692648; Name=EY692648; organism=Citrus sinensis; type=EST; length=895bp
CCACGCGTCCGGAACTATTATTGCATTTCCTCATCTCATTGGAAGAGGAA
AAGCAAAATCAAGCCTCTAAGTTGGTGGGGGAGATTCAGTCCTTAGAAGC
AGATATTAAAGAGGTTGAGAGAAGGCAGTATTTGAAAAAACCTTTGGTGG
ATCCTTCCTTGCAAAACGAGTCCGCCCCTTCAAGGGAAAACAGGTATTTT
AACGAACAACTTTCAAGTTCAGAGGCTCAGCTGTCACCCATTTCTGATGC
AAATGAAATGAGGTTGATGAGGAATTTAAGTCAGCTTGAAAGGGCTTACT
TCTCCATGAGATCGCAAATCCAGCTTTCTGATTCTGATTCCACAACACGC
GCTGACAATGATTTACTGAGAGATCGTGAAAATTTGTTTTTAGCACAACA
GGATCAGGAAATACAGAATCCCACCGATCGTCTAGGAGCCTTCTTTGATG
GTTTATGCAAGTATGCTCGCTATAGTAAGTTTGAAGTGCGGGGTATGCTG
AGAACTGGGGAATTCAATAACTCTGCCAACGTAATTTGCTCAATTAGTTT
TGACCGGGATGAAGATCATTTTGCTGCTGCTGGAGTATCAAAGAAAATAA
AGATATTTGAGTTTAATGCACTGTTTAATGACTCCCGTTGATGTTATTAT
CCGGCAGTAGAAATGTCTAACAGATCNAAGCTTAGCTGCGTATGCTGGAA
CAATTATATTAAGAACTATCTGGGCTCAGCTGACTATGATGGTGTGGTCA
NGGTTNGTATGTCCTGTAGGCTATNCACTTATTGCTTTAGAAAGAAATTN
NGTTTTTACTTGNAGNNTATATTTCTTTTATCTTTGGGGGCATGGAATCC
CACTGCTGGGTTTTGCTGACATTTCATGACTTCTACCCCTTTATT
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