EY692643

Overview
NameEY692643
Unique NameEY692643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length943
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692643_ssr204 microsatellite EY692643_ssr204:204..217. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY692643 vs. ExPASy Swiss-Prot
Match: FPP3_ARATH (Filament-like plant protein 3 OS=Arabidopsis thaliana GN=FPP3 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.813e-31
Identity = 68/117 (58.12%), Postives = 74/117 (63.25%), Query Frame = 3
Query:  276 MDRRSWLWRRKXXXXXXXXXXXXXXXXXXXXXRFSDDQTHSSQSSEATSKAPPLDEVVNDSVKTLTEKLSAALLNVSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQK 626
            MDRRSWLWRRK                     RFSDDQ   SQS E  SK    +E     +K LTE+LSAALLNVS KEDL KQHAKVAEEAVSGWEKAENE + LKQQL A++ K
Sbjct:    1 MDRRSWLWRRKSSEKSPGETESTGSVSSHSE-RFSDDQR--SQSPELNSKPVTREEEATADIKILTERLSAALLNVSLKEDLAKQHAKVAEEAVSGWEKAENEAAALKQQLDASTSK 114          

HSP 2 Score: 40.0466 bits (92), Expect = 3.813e-31
Identity = 23/57 (40.35%), Postives = 29/57 (50.88%), Query Frame = 2
Query:  620 SEESALENRVSHLDGGLKECVRGTKXXXXXXXQRIXETGSKQNLEWGIKKLSLRVSL 790
            S+ SALE+R SHLD  LKECVR          Q+I E  + +  EW   K  L   +
Sbjct:  113 SKVSALEDRNSHLDSALKECVRQLWQGREEQNQKIEEAINNKCKEWETTKSQLEARI 169          
BLAST of EY692643 vs. ExPASy Swiss-Prot
Match: FPP1_ARATH (Filament-like plant protein 1 OS=Arabidopsis thaliana GN=FPP1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 59/126 (46.83%), Postives = 77/126 (61.11%), Query Frame = 3
Query:  384 DQTHSSQSSEATSKAPPLD-----EVVNDSVKTLTEKLSAALLNVSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQKNQHLKIELVILMGDSRNV*GALRQLGKRQSRGSXKLVLSK 746
            + T  S+  E  S    L+     E + DS+KTL EKLSAAL NVSAK+DLVKQH KVAEEAV+GWEKAENE+  LK++L+AA  KN+ L+  +  L G  +     LRQ    Q +     V+ +
Sbjct:   32 ESTMESRDDEIQSPTVSLEVETEKEELKDSMKTLAEKLSAALANVSAKDDLVKQHVKVAEEAVAGWEKAENEVVELKEKLEAADDKNRVLEDRVSHLDGALKECVRQLRQARDEQEQRIQDAVIER 157          
BLAST of EY692643 vs. ExPASy Swiss-Prot
Match: FPP4_ARATH (Filament-like plant protein 4 OS=Arabidopsis thaliana GN=FPP4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.132e-13
Identity = 42/115 (36.52%), Postives = 55/115 (47.83%), Query Frame = 3
Query:  276 MDRRSWLWRRKXXXXXXXXXXXXXXXXXXXXXRFS---DDQTHSSQSSEATSKAPPLDEVVNDSVKTLTEKLSAALLNVSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLK 611
            MDR+SW W++K                           D  T+ +   +           + D +K L  KLS A  ++ AKE LVKQH+KVAEEAV+GWEKAE E S LK  L+
Sbjct:    1 MDRKSWPWKKKSSEKTATVTEVVDQENGKKPSYIQISFDQYTNLNGLKDEVKSYEEKVTKLEDQIKDLDLKLSTANADIVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLE 115          

HSP 2 Score: 30.8018 bits (68), Expect = 1.132e-13
Identity = 12/32 (37.50%), Postives = 20/32 (62.50%), Query Frame = 2
Query:  635 LENRVSHLDGGLKECVRGTKXXXXXXXQRIXE 730
            +E+R +HLDG LKEC+R  +       Q++ +
Sbjct:  124 VEDRAAHLDGALKECMRQIRSLKEENEQKLHD 155          
BLAST of EY692643 vs. ExPASy Swiss-Prot
Match: FPP_SOLLC (Filament-like plant protein (Fragment) OS=Solanum lycopersicum GN=FPP PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.449e-12
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  510 KEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAASQKNQHLKIELVILMGDSRNV*GALRQLGKRQSR 719
            KEDLVKQHAKVAEEA++GWEKAENE++ LKQQL AA Q+N  L++ +  L G  +     LRQ    Q +
Sbjct:    1 KEDLVKQHAKVAEEAIAGWEKAENEVAVLKQQLDAAVQQNLTLEVRVSHLDGALKECVRQLRQARDEQEK 70          
BLAST of EY692643 vs. ExPASy Swiss-Prot
Match: FPP5_ARATH (Filament-like plant protein 5 OS=Arabidopsis thaliana GN=FPP5 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 2.603e-12
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 3
Query:  381 DDQTHSSQSSEATSKAPPLDEVVNDSVKTLTEKLSAALLNVSAKEDLVKQHAKVAEEAVSGWEKAENELSTLKQQLKAAS 620
            D  TH S+  +       L EV    VK L EKL+ A   ++ KE L+ QHAKVAEEAVSGWEKA+ E   LK+QL++ +
Sbjct:   56 DSYTHMSRMEDQVK----LFEV---QVKDLKEKLTLAHSEINTKESLILQHAKVAEEAVSGWEKADAETLALKRQLESVT 128          

HSP 2 Score: 29.6462 bits (65), Expect = 2.603e-12
Identity = 25/89 (28.09%), Postives = 41/89 (46.07%), Query Frame = 2
Query:  638 ENRVSHLDGGLKECVRGTKXXXXXXXQRIXETGSKQNLEWGIKKLSLRVSLLISKKLQLPK*SAASLDRISLQTEGVRKESALN*ALSQ 904
            E+R SHLD  LKEC R           RI +  S + L+           ++++K  Q  K  A    +I   +EG+ + ++ N AL++
Sbjct:  135 EDRASHLDDALKECTRQI---------RIVKEESDKKLQ----------DVILAKTSQWDKIKAELEGKIDELSEGLHRAASDNAALTR 204          
The following BLAST results are available for this feature:
BLAST of EY692643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FPP3_ARATH3.813e-3158.12Filament-like plant protein 3 OS=Arabidopsis thali... [more]
FPP1_ARATH1.224e-1946.83Filament-like plant protein 1 OS=Arabidopsis thali... [more]
FPP4_ARATH1.132e-1336.52Filament-like plant protein 4 OS=Arabidopsis thali... [more]
FPP_SOLLC1.449e-1255.71Filament-like plant protein (Fragment) OS=Solanum ... [more]
FPP5_ARATH2.603e-1247.50Filament-like plant protein 5 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692643 ID=EY692643; Name=EY692643; organism=Citrus sinensis; type=EST; length=943bp
CCACGCGTCCGCCCACGCGTCCGAATGTTATGTGGTCCTGTGTCTCTGTC
TTCGTATTGTATGGCGTGAAATTTGGGGGATTGAGTTGGTGGTAGAGCTA
CATAGAGCGCCAGTTAGATGTTGACAAATTTATTTTGTATCTGAAGCAAG
CAATCGGATTACTTGGGATTCAATCGAAAGCAGAGATTGATTGAATTGAG
TGAGTGTGTGTGTGTGTGATCATCAATATTCGTCTAGATTTAGATTAAAT
TATAATTTAGAAAATTAGAAATTAGATGGACCGTCGTAGTTGGCTTTGGC
GAAGAAAGTCCGGTGGCGGTGCCGCTGGCGGCGAAACTGAGAGTTCCGGC
TCCGTTTCTTCCCTTTCTGAACGGTTCTCCGATGATCAGACTCATAGTTC
GCAGTCATCAGAGGCCACGTCTAAAGCGCCACCTCTCGATGAAGTAGTCA
ATGACAGTGTGAAGACTCTAACAGAGAAACTGTCCGCTGCTCTTCTCAAC
GTCAGTGCCAAGGAAGACTTGGTAAAGCAGCATGCTAAAGTTGCCGAAGA
AGCTGTATCAGGCTGGGAGAAGGCTGAAAATGAATTGTCAACATTAAAGC
AACAACTTAAGGCTGCTTCTCAGAAGAATCAGCACTTGAAAATCGAGTTA
GTCATCTTGATGGGGGACTCAAGGAATGTGTAAGGGGCACTAAGGCAGCT
AGGGAAGAGGCAGAGCAGAGGATCCANGAAACTGGTTCTAAGCAAAATTT
AGAATGGGGAATCAAAAAGCTGAGCTTGAGAGTAAGCTTGTTGATCTCCA
AAAAACTGCAACTGCCCAAGTGAAGCGCTGCCTCNCTTGATCGGATCTCG
CTCCAAACTGAGGGTGTGAGAAAAGAATCGGCCCTTAACTGAGCTCTTTC
CCAGTAAGGGCTAAACCTAAGGTCGTTGGGGGGCCTACCCCAA
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