EY692641

Overview
NameEY692641
Unique NameEY692641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.367e-62
Identity = 119/135 (88.15%), Postives = 124/135 (91.85%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVKFLKPNKAVILLQGRYAG+KAVIVK+F DGTRE+ YGHCLVAGIKK+P KVI+KDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKD V  D LQSKDKKVTA KET K LEERFKTGKNRWFFTKL F
Sbjct:    1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.198e-59
Identity = 112/135 (82.96%), Postives = 121/135 (89.63%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVKFLK NKAVILLQGRYAG+KAVI+KSF DG R+R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+LQSKDKKV A KE   +LEERFKTGKNRWFFTKL F
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.198e-59
Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVKFLK NKAVILLQGRYAG+KAVI+KSF DGT +R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+L+SKDKKVTA KE   +LEERFKTGKNRWFFTKL F
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.563e-57
Identity = 107/135 (79.26%), Postives = 119/135 (88.15%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVK +KP KAVILLQGRY G+KAVIVKSF DGT E+ YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VVSAD++ SKDKKVTA KE   + EERFKTGKNRWFFTKL F
Sbjct:    1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 9.820e-54
Identity = 107/139 (76.98%), Postives = 119/139 (85.61%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL----KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KFLKPNKAVILLQG+YAGRKAVIV++F +GTR+R YGHCLVAGI +YP KVIRKDSAKK  KKSRVKAF+KLVNY H+MPTRYTLD DL    KDVV+AD LQ++DKKVTA + T  RL ERFKTGKNRWFFTKL F
Sbjct:    1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 8.622e-42
Identity = 85/135 (62.96%), Postives = 103/135 (76.30%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            MVKFLK  K V++L GR+AG+KAVIV++F DGT  R YGH LV G++K P KV ++ S KK AKKS +K F+K VNY HLMPTRYTLDVD K  V+A++ ++  KKV A KE  K LEE+FKTGKNRWFFTKL F
Sbjct:    1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKG-VAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.861e-36
Identity = 77/136 (56.62%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRYAGRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 2.430e-36
Identity = 77/136 (56.62%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRYAGRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 5.413e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRYAGRKAVIVK+  DGT +R Y H LV+GI +YP KV      KK AK+S++KAFVK+ NY HLMPTRY++D+ L K +V+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
BLAST of EY692641 vs. ExPASy Swiss-Prot
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 9.234e-36
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 3
Query:   66 MVKFLKPNKAVILLQGRYAGRKAVIVKSFYDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETNKRLEERFKTGKNRWFFTKLMF 470
            M KF+KP K V++L GRY+GRKAVIVK+  DGT +R Y H LVAGI +YP KV      KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D  +    K  A +E   + EER+KTGKN+WFF KL F
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136          
The following BLAST results are available for this feature:
BLAST of EY692641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RL27_PEA3.367e-6288.1560S ribosomal protein L27 OS=Pisum sativum GN=RPL2... [more]
RL273_ARATH1.198e-5982.9660S ribosomal protein L27-3 OS=Arabidopsis thalian... [more]
RL272_ARATH1.198e-5982.9660S ribosomal protein L27-2 OS=Arabidopsis thalian... [more]
RL271_ARATH5.563e-5779.2660S ribosomal protein L27-1 OS=Arabidopsis thalian... [more]
RL27_SOLTU9.820e-5476.9860S ribosomal protein L27 OS=Solanum tuberosum GN=... [more]
RL27_PYRST8.622e-4262.9660S ribosomal protein L27 OS=Pyrobotrys stellata G... [more]
RL27_HIPCM1.861e-3656.6260S ribosomal protein L27 OS=Hippocampus comes GN=... [more]
RL27_DANRE2.430e-3656.6260S ribosomal protein L27 OS=Danio rerio GN=rpl27 ... [more]
RL27_ICTPU5.413e-3655.1560S ribosomal protein L27 OS=Ictalurus punctatus G... [more]
RL27_RAT9.234e-3655.1560S ribosomal protein L27 OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-H01-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692641 ID=EY692641; Name=EY692641; organism=Citrus sinensis; type=EST; length=936bp
CCACGCGTCCGCAAACACACAAAAACCCATAGAGAGCCGCGGGTGCGCGA
GGAGCGAGAGTTGAAATGGTGAAGTTTCTGAAACCAAACAAGGCCGTGAT
CCTTCTTCAGGGCCGTTACGCCGGTCGGAAGGCGGTGATCGTGAAGTCGT
TCTACGACGGGACCCGCGAGAGGGCGTACGGGCACTGTTTGGTAGCGGGG
ATAAAGAAGTACCCGGGCAAGGTCATCCGCAAGGACTCGGCGAAGAAGAC
AGCGAAGAAGTCACGCGTCAAGGCCTTCGTCAAGTTGGTCAACTACCAGC
ACCTGATGCCCACGCGCTACACTCTCGACGTCGATTTGAAGGACGTCGTG
TCGGCCGATTCCCTCCAGAGCAAGGACAAGAAGGTGACCGCTTGCAAGGA
GACCAACAAGCGCCTCGAGGAGAGGTTTAAGACTGGCAAGAATCGCTGGT
TCTTTACTAAGCTCATGTTTTAGATTTTTAACCAAAGGCAGACAACGACT
TGTGCTTATGCCTTGATTTATGTTGAGTTATTGAAAACGCTTTACTTGTT
AAAGAGCCGATTTTGAGATGTATGTAGTTTCTAGCGAACTTATTGTAGTT
CTCGATCTGGGACTATTATTATGTGATCATATTGGGGTTATGGNGNCAAC
GGAAAATATTGCNACTGAAAAGTGCGTTTANGGACAGATAGAAGAGTACC
AGACGAGTCCTTTTCCCCCAAAGGCGGAGGCAAATTCTTTTACATGGGGT
GGGCGCACATAGATTACCAAGAATTTATATTATGGTTGGATCCCAACAAT
TTCCAAGTAGGCATCAAATTCTCATACCTGTCTCTGGGTAACACGGCTTG
GGGGCTAACCCTGCTTAATATACTTACCCCGTGACATTCCCGCTTTCCCA
GTGGGGAAAAAAAAAAGGCCCCCCGGGGCCCCTCTT
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