EY692635

Overview
NameEY692635
Unique NameEY692635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY692635 vs. ExPASy Swiss-Prot
Match: FKBP7_ARATH (Probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic OS=Arabidopsis thaliana GN=At5g13410 PE=1 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.679e-85
Identity = 151/195 (77.44%), Postives = 173/195 (88.72%), Query Frame = -3 
Query:  190 RRVLISSIDC*LWPVQCFK--GWSSLAAEFADMPALRGKDYGKTKMRYPDYTETESGLQYKDLRQGSGPKPKMGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKDYFKFRLGSQDVIPAFEEAVSGMALGGVRRIIVPPEIGYPENDYNKSGPRPTTFSGQRALDFVLRNQGLIDKTLLFDIELLKIIPN 768
            R++L+SS+   +  +      G  + A++FADMPAL+GKDYGKTKM+YPDYTET+SGLQYKDLR G+GP  K G+ VVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDK++FKF LGS +VIPAFEEAVSGMALGG+RRIIVPPE+GYP+NDYNKSGPRP TFSGQRALDFVLRNQGLIDKTLLFD+ELLKI+PN
Sbjct:   62 RKLLVSSVGLLIGALSYDSKDGDFASASQFADMPALKGKDYGKTKMKYPDYTETQSGLQYKDLRVGTGPIAKKGDKVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKEFFKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMTFSGQRALDFVLRNQGLIDKTLLFDVELLKIVPN 256
The following BLAST results are available for this feature:
BLAST of EY692635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FKBP7_ARATH6.679e-8577.44Probable FKBP-type peptidyl-prolyl cis-trans isome... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-G07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692635 ID=EY692635; Name=EY692635; organism=Citrus sinensis; type=EST; length=815bp
CCACGCGTCCGCGGACGCGTGGGTTTTTTTTTTTTTTTTTTTGAAAAAAC
TAAATCAGAACAGCTCTTGGAGTTAAAATATTCCAAATGATAGTGTTTTA
CAAAATGACTCACTTGTACATAATTATCACCATGTTCCCTTTTATGTTCA
GATGGGGCTAATGAAGCATAATAAGGTCACAAATGATCAGTTTGGTATAA
TTTTGAGGAGCTCAATATCAAACAGCAGAGTCTTGTCTATCAGTCCTTGG
TTCCTCAGCACAAAATCCAAGGCTCGCTGGCCCGAAAATGTAGTTGGCCT
TGGGCCACTTTTGTTGTAGTCATTCTCAGGATATCCAATTTCAGGGGGCA
CTATGATCCTTCTAACACCACCCAGAGCCATGCCTGAGACAGCTTCCTCA
AAAGCTGGAATTACATCTTGAGATCCGAGTCGAAATTTAAAATAGTCCTT
GTCATCACCCTCAAAGGAACCGCCCTTTGTCTTGTTTCGAGCCTCAAATA
TGCGACCATAGTATCCTATGGTGTAACCATCCCAGTCAACCACAACTGTT
TCCCCCATCTTTGGTTTAGGACCACTTCCTTGTCGCAAGTCCTTATACTG
AAGACCAGATTCCGTTTCTGTGTAGTCTGGATACCGCATTTTCGTCTTGC
CATAATCCTTCCCTCGAAGTGCTGGCATATCAGCAAATTCAGCTGCTAAA
CTACTCCATCCTTTGAAGCATTGAACAGGCCACAGCTAACAATCAATGGA
TGATATTAGCACTCTCCTTCCTCAACGACTTGTCNGNTACTTGTATGACT
AATTTCACCGTANGA
back to top