EY692632

Overview
NameEY692632
Unique NameEY692632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692632 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 7.800e-64
Identity = 116/174 (66.67%), Postives = 146/174 (83.91%), Query Frame = 3
Query:   30 DVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEV-HMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQV 548
            D + ++Q+AG  W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH  PLKEI+ NISFA IGL+DMFNS GA+E++++ H+++K P+ FDGE+SS  + +LSDNRSPTA +S+ VRGCGRFG YSSQRPLKC V S +TDFTYD+  GL+T+ LPV  EEM+RW VEI V
Sbjct:  601 DADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITENISFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISS-ASPALSDNRSPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGLVTLNLPVTREEMFRWHVEILV 773          
BLAST of EY692632 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.064e-28
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 3
Query:   30 DVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSS-QRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEEEMYRWPVEIQ 545
            DV  + ++A   W GD+IVY+H  GE+V LPK  S+PVTL   EYE+F   P+KE S    FA +GL++MFNSGGA+ ++                         D+      + +K+RG G  G+YSS +RP   TV S   ++ Y+  +GL+T TL VPE+E+Y W V IQ
Sbjct:  605 DVHYLHKVAAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLMEMFNSGGAIVSLRY-----------------------DDEGTKFVVRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPESGLVTFTLGVPEKELYLWDVVIQ 754          
BLAST of EY692632 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.296e-23
Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 3
Query:   66 WNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTL---PVPEEEMYRWPVEI 542
            WNGD  VY+   GE++ +P   S+PV+LK+ E+E+F   P+  +   +SFA IGL++M+NSGGA+E +     + K                         + ++V+GCG+FG YSS +P +C V S +  F YDS++GL+T  L   P+  +  +   VE+
Sbjct:  613 WNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVDGVSFAPIGLVNMYNSGGAIEGLRYEAEKMK-------------------------VVMEVKGCGKFGSYSSVKPKRCVVESNEIAFEYDSSSGLVTFELDKMPIENKRFHLIQVEL 749          
BLAST of EY692632 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.016e-11
Identity = 49/170 (28.82%), Postives = 85/170 (50.00%), Query Frame = 3
Query:   24 VTDVENMAQIAGAG----WNGDAIVYAHRSGEVVRL-PKGASVPVTLKVLEYELFHFCPLKE-ISSNISFAAIGLLDMFNSGGAVENVEVHMSEKKPDLFDGEVSSELTTSLSDNRSPTATISLKVRGCGRFGIYSSQRPLKCTVGSIQTDFTYDSATGLMTMTLPVPEE 515
            V+D+E       AG    + GD +VY  +S E++ +  K  ++ +TL+   ++L  F P+ E +SS + F  +GL++MFN  G V++++V                       DN     +I + V+G GRF  YSS  P+KC +   + +F ++  TG ++  +P  EE
Sbjct:  722 VSDIEWDQNPEAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAFDLLSFVPVTELVSSGVRFVPLGLINMFNCVGTVQDMKV---------------------TGDN-----SIRVDVKGEGRFMAYSSSAPVKCYLNDKEAEFKWEEETGKLSFFVPWVEE 865          
The following BLAST results are available for this feature:
BLAST of EY692632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
RFS2_ARATH7.800e-6466.67Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH1.064e-2839.88Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH2.296e-2334.57Probable galactinol--sucrose galactosyltransferase... [more]
RFS4_ARATH2.016e-1128.82Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-G03-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692632 ID=EY692632; Name=EY692632; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGCCCACGCGTCCGGTAACTGATGTTGAAAATATGGCTCAG
ATTGCTGGTGCCGGCTGGAATGGGGATGCAATTGTTTATGCCCATAGATC
AGGTGAGGTTGTGCGGTTGCCCAAAGGTGCTTCAGTGCCAGTAACACTTA
AGGTTCTTGAATACGAGCTATTCCATTTCTGCCCGCTGAAGGAGATCTCT
TCAAACATTTCATTCGCAGCAATAGGCTTGCTCGACATGTTCAACAGTGG
AGGTGCTGTCGAGAATGTGGAGGTGCATATGTCTGAGAAGAAGCCAGATC
TCTTTGATGGTGAAGTATCTTCTGAACTGACCACCTCCCTCAGTGACAAC
CGATCTCCAACCGCCACAATCTCTCTCAAAGTTAGGGGATGTGGAAGGTT
TGGCATTTACTCTTCCCAGCGTCCTCTGAAATGCACCGTGGGCAGCATCC
AGACCGACTTCACCTACGATTCTGCAACCGGGTTGATGACCATGACACTC
CCGGTTCCGGAGGAAGAGATGTACAGATGGCCTGTTGAGATCCAAGTCTA
AGGACTTTCATGTTATGTTATTAAATAACATCAGATTGTTAGATTTGTCA
CCATGTTCAGGGGTGGTTTCCATTCAAGTGGGAAGCTGTGGTGAACATGA
CTTGCATTTGAGTGATGATCATGAAAAGATAATTGCTAGAATATGTTGCT
GGNTGGNTCTCTGTAATAAAGTGGTCTGATCCTCTGATCATCGAATTTTC
AAAAAAAAAAAAAAAAAAAAAAAGGGCGCGGTCTAAAGACCAAGCTTACT
AGCGTGCATGGACGTCTAACTCTCTATATGCACTAAATTCATCACGGCGN
CGTTTAAACGCGTGACTGGAAACCTGGGTACCACTTATCGCTGGGAATCC
CCTTTCCCGTGGGGTA
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