EY692626

Overview
NameEY692626
Unique NameEY692626
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692626_ssr603 microsatellite EY692626_ssr603:603..614. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32_ARATH (Acidic leucine-rich nuclear phosphoprotein 32-related protein OS=Arabidopsis thaliana GN=At3g50690 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.458e-36
Identity = 74/130 (56.92%), Postives = 85/130 (65.38%), Query Frame = 3
Query:  177 CVLWRXXXXXXXXXXXXXEYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLPVVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            CV  R             ++LS+ANI VSSLEQ PRL NLQKLILSDNRI VGLEFL +AG          NN I ++ DLAPL  L +VSLDLY CP TR KDYRS+ FG+I +L YLD  DAE N+RP
Sbjct:   33 CVQGRLPPPSVLEKFQNLQHLSVANIGVSSLEQFPRLGNLQKLILSDNRITVGLEFLVEAGLDSFCDLDLSNNRIQFVEDLAPLAELKLVSLDLYECPVTRLKDYRSRVFGLIKTLKYLDKTDAEGNERP 162          

HSP 2 Score: 36.965 bits (84), Expect = 4.458e-36
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 2
Query:   80 MDEIWERAV*TALYGQSDHGAVQTLTV 160
            MDEIWERAV  AL GQ+D  A +TLT+
Sbjct:    1 MDEIWERAVEAALDGQTDRLATRTLTL 27          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN321_ORYSJ (Acidic leucine-rich nuclear phosphoprotein 32-related protein 1 OS=Oryza sativa subsp. japonica GN=Os07g0607800 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.779e-27
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLPVVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LSIA + V+SL   PRL NL +L LSDNRIA GL+ L  AG          NN I  + DL+PL +L +VSLDLY CP TR KDYRSK FGMI +L YLD MDA+EN+RP
Sbjct:   53 EHLSIAGVGVASLAGFPRLRNLTRLTLSDNRIAGGLDHLVAAGLASLRDLDLSNNRIQDVGDLSPLANLRLVSLDLYECPVTRVKDYRSKVFGMIRTLKYLDKMDADENERP 164          

HSP 2 Score: 24.6386 bits (52), Expect = 1.779e-27
Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 2
Query:   80 MDEIWERAV*TALY--GQSDHGAVQTLTV 160
            MDE WERAV  AL   G+      ++LT+
Sbjct:    1 MDEAWERAVEAALQAAGEGSSSPARSLTL 29          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN322_ORYSJ (Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 OS=Oryza sativa subsp. japonica GN=Os03g0668900 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14
Identity = 49/112 (43.75%), Postives = 63/112 (56.25%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRI--AVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLPVVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEEND 560
            E LS+A   +SSL  +PRL  L++L L DNR+  A  L  + ++           NN    + +LAPL    V SLDLY CP T+ K YR K F +I SL +LD MDAE ND
Sbjct:   59 EELSVAGARLSSLAGLPRLPALRRLSLPDNRLSGAASLAAVAESCGATLRHLDLGNNRFADVAELAPLAPHGVESLDLYQCPVTKAKGYRDKVFALIPSLKFLDGMDAEGND 170          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32B_CHICK (Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Gallus gallus GN=ANP32B PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS+ N+ + S+  +P+LN L+KL LSDNRI+ GLE L +             N I  I  L PL  LP + SLDL+ C  T   +YR   F ++  LTYLD  DA+E + P
Sbjct:   45 EFLSMINVNLLSISNLPKLNKLRKLELSDNRISGGLEVLAER-TPNLTHLNLSGNKIKDINTLEPLKKLPNLHSLDLFNCEVTMLINYRESVFTLLPQLTYLDGFDADEQEAP 156          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32E_RAT (Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Rattus norvegicus GN=Anp32e PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS+AN+ +SSL ++P LN L+KL LSDN I+ GLE L +             N I  +  +  L +L  + SLDL+ C  T  +DYR   F ++  +TYLD  D E+N+ P
Sbjct:   45 EFLSMANVELSSLARLPSLNKLRKLELSDNIISGGLEVLAEK-CPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAP 156          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32E_MOUSE (Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Mus musculus GN=Anp32e PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS+AN+ +SSL ++P LN L+KL LSDN I+ GLE L +             N I  +  +  L +L  + SLDL+ C  T  +DYR   F ++  +TYLD  D E+N+ P
Sbjct:   45 EFLSMANVELSSLARLPSLNKLRKLELSDNIISGGLEVLAEK-CPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAP 156          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32E_HUMAN (Acidic leucine-rich nuclear phosphoprotein 32 family member E OS=Homo sapiens GN=ANP32E PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS+AN+ +SSL ++P LN L+KL LSDN I+ GLE L +             N I  +  +  L +L  + SLDL+ C  T  +DYR   F ++  +TYLD  D E+N+ P
Sbjct:   45 EFLSMANVELSSLARLPSLNKLRKLELSDNIISGGLEVLAEK-CPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAP 156          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32B_XENTR (Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Xenopus tropicalis GN=anp32b PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12
Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS+ N+ + S+  +P+L  L+KL LSDNRI+ GLE L +             N I  I  L PL  LP ++SLDL+ C  T   +YR   F ++  LT+LD  DA++ + P
Sbjct:   45 EFLSMINVNLLSVANLPKLPKLKKLELSDNRISGGLEVLAER-TPNLTHLNLSGNKIKEINTLEPLKKLPHLMSLDLFNCEVTMLNNYRESVFELLPQLTFLDGFDADDQEAP 156          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32B_XENLA (Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Xenopus laevis GN=anp32b PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.440e-12
Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS+ N+ + S+  +P+L  L+KL LSDNRI+ GLE L +             N I  I  L PL  LP ++SLDL+ C  T   +YR   F ++  LT+LD  DA++ + P
Sbjct:   45 EFLSMINVNLLSVANLPKLPKLKKLELSDNRISGGLEVLAER-TPNLTHLNLSGNKIKEINTLEPLKKLPHLMSLDLFNCEVTMLNNYRESVFELLPKLTFLDGFDADDQEAP 156          
BLAST of EY692626 vs. ExPASy Swiss-Prot
Match: AN32A_HUMAN (Acidic leucine-rich nuclear phosphoprotein 32 family member A OS=Homo sapiens GN=ANP32A PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.280e-12
Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 3
Query:  231 EYLSIANIVVSSLEQIPRLNNLQKLILSDNRIAVGLEFLGQAGXXXXXXXXXXNNPIHYIIDLAPLGHLP-VVSLDLY*CPGTREKDYRSKGFGMINSLTYLDNMDAEENDRP 566
            E+LS  N+ ++S+  +P+LN L+KL LSDNR++ GLE L +             N I  +  + PL  L  + SLDL+ C  T   DYR   F ++  LTYLD  D ++ + P
Sbjct:   45 EFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEK-CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYDRDDKEAP 156          
The following BLAST results are available for this feature:
BLAST of EY692626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
AN32_ARATH4.458e-3656.92Acidic leucine-rich nuclear phosphoprotein 32-rela... [more]
AN321_ORYSJ1.779e-2758.04Acidic leucine-rich nuclear phosphoprotein 32-rela... [more]
AN322_ORYSJ3.408e-1443.75Acidic leucine-rich nuclear phosphoprotein 32-rela... [more]
AN32B_CHICK4.921e-1341.59Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
AN32E_RAT1.870e-1239.82Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
AN32E_MOUSE1.870e-1239.82Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
AN32E_HUMAN1.870e-1239.82Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
AN32B_XENTR5.440e-1238.94Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
AN32B_XENLA5.440e-1238.94Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]
AN32A_HUMAN9.280e-1237.17Acidic leucine-rich nuclear phosphoprotein 32 fami... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-F09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692626 ID=EY692626; Name=EY692626; organism=Citrus sinensis; type=EST; length=788bp
CCACGCGTGCGCCCAAGCGTCTGAAAATAGGATAATATTTAAATAAATTT
GGTGTATGAGATATCTGATTTCTTATTTTATGGATGAGATCTGGGAAAGG
GCCGTTTAGACAGCATTATACGGGCAATCGGACCATGGCGCGGTTCAAAC
CCTAACAGTTAGACTGTTGGGGCTAGTGTGTGCTATGGCGGCTGCCTCCA
CCGAACCTTTTATAAATGCTCCAGAACCTTGAATATCTTTCGATTGCCAA
CATCGTAGTTTCCTCTCTCGAGCAGATTCCACGGCTTAACAATCTTCAGA
AACTTATTCTCTCCGATAACCGTATAGCCGTGGGCCTCGAGTTTCTGGGC
CAAGCTGGCTTGGACTCTCTTCACGACCTTGATTTGTCTAATAATCCGAT
CCACTATATCATAGATCTGGCCCCGCTGGGCCATCTTCCGGTTGTGTCTC
TTGATCTGTACTAATGTCCGGGTACAAGGGAGAAAGATTATCGATCTAAG
GGTTTTGGAATGATAAATTCCTTGACGTACTTGGACAACATGGATGCTGA
GGAGAATGATAGGCCGGACTCCGATGATGAATCGGACGATGATGAATCTG
ACGATGATGATGATCCAGGAAGTGGAGACATTGACGGTGAGCATCGACAC
TTTGGGACGGATAATGGACNCAATGAGATGCTCCATGTGTTGTCGATGTA
GACGAGGAGGATGAGAGTGTACGCATGAAGAGAACGTCTACACTGCTGCT
GGACCAGCAGCACCTGCTGTCGATGTGATAAATGGCCA
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