EY692624

Overview
NameEY692624
Unique NameEY692624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692624_ssr370 microsatellite EY692624_ssr370:370..381. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY692624 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26
Identity = 88/195 (45.13%), Postives = 109/195 (55.90%), Query Frame = 2 
Query:  311 MQASTYAIKASVCFDARNR-----RRACVLAAGFANTRSVALNCNFTSNNSICMRDMGMKLTRATQGVETLFR-STVKPRSVKAQASA-GDIEEATPFKPQEKKSSGVVLPFVGVAWLGAILFGYHLXVVNGALEYLAXDXGIAE-TLSCXDGCQLITCWCHCWFFYWRIIG*QFGRTGLFSRRSSP-AAGAFMC 868
            MQ+STYA+K +  F  + R     R        FA  +S+A       + S     MG  L RA  G++++   S+VK RSV+AQAS+ GD EEA P +  E KSSG VLPFVGVA LGAILFGYHL VVNGALEYLA D GIAE T+        +        F    +  +FGRT  F   + P A GAF+C
Sbjct:    1 MQSSTYAVKGNAAFAFQRRTFSSDRSTTSTGIRFAGYKSLATTGPLYCSGS---EAMGATLARADNGIQSVMSFSSVKARSVRAQASSDGDEEEAIPLR-SEGKSSGTVLPFVGVACLGAILFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGAFLC 191
The following BLAST results are available for this feature:
BLAST of EY692624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLST4_ARATH4.679e-2645.13Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-F07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692624 ID=EY692624; Name=EY692624; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTCCAAAATTACAACAAGATAAGAAAAAGAAAAAAAAAA
TTAGATTCCGTAAAAATTAAATCATAAGAGAAAAGCAGGCGAGAATCGAA
GGTTGAATTCTGAATTCTCCACCAACTCGACCTTGTTTGGCTCTTGTTTA
GTAAGCATAGAGTAGAGTTTCCACTCTCACTCTCTCGGCGATATTCCCCA
AGCACTCGCAAAATATTATATTTACTCATAGATTGCACCAAAAGAGAATA
TTTTCGTTTAGTTAGAGAAAAGCTTCTCATCGCTCTCTTCTCTCACCATC
GCAGGCGACAATGCAGGCGTCCACGTACGCAATCAAAGCGAGTGTATGCT
TTGACGCCCGCAATCGGAGGCGTGCGTGCGTGTTGGCTGCTGGCTTTGCT
AACACCAGAAGTGTTGCTTTGAATTGTAATTTTACTAGTAATAATAGTAT
TTGCATGAGAGATATGGGAATGAAGCTCACACGTGCCACTCAGGGCGTTG
AAACTCTGTTTAGATCAACGGTTAAGCCCCGATCGGTGAAAGCTCAAGCC
TCCGCTGGAGACATTGAAGAAGCTACTCCTTTCAAGCCTCAGGAGAAAAA
ATCTTCTGGAGTAGTTTTGCCTTTTGTTGGGGTTGCTTGGTTGGGAGCTA
TTTTATTTGGTTACCACTTANGGGTTGTAAATGGCGCTCTTGAATACCTT
GCCNAGGACCNTGGGATTGCTGAAACACTGTCCTGCANGGATGGATGTCA
GCTCATTACTTGCTGGTGCCACTGTTGGTTCTTTTACTGGAGGATCATTG
GCTGACAATTTGGCAGAACAGGACTTTTCAGTAGACGCAGTTCCCCTGCA
GCTGGAGCATTCATGTGCTACTGGCAGAGTGACAG
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