EY692622

Overview
NameEY692622
Unique NameEY692622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10775 contig Csv1_Contig10775:214..1105. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692622 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 9.828e-39
Identity = 67/79 (84.81%), Postives = 72/79 (91.14%), Query Frame = 3 
Query:  480 LADLKNEASFLSSDGSLAIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPTTVVVEER 716
            L D K+  SFLSSDGSL +HAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR  SFEYGRYGNPTTVV+E++
Sbjct:  164 LTDSKH--SFLSSDGSLTVHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRSVSFEYGRYGNPTTVVLEDK 240

HSP 2 Score: 48.521 bits (114), Expect = 9.828e-39
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 2 
Query:  713 EISALEGAEXTVIMASGMCVXTVMLLAWXPAVG 811
            +ISALEGAE T++MASGMC  TVMLLA  PA G
Sbjct:  240 KISALEGAESTLVMASGMCASTVMLLALVPAGG 272

HSP 3 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 3 
Query:  138 DPDFSGS--ARFDKPRISAARVIGASTASFSGLSSLIFRFPPNFVRQLSTKARRNCSNIGVAQI 323
            DPD  GS      + R+ A+  I +S    +GLSS I RFPPNFVRQLS KARRNCSNIGVAQI
Sbjct:   25 DPDLVGSPVGGSSRRRVHASAGISSSFTGDAGLSSRILRFPPNFVRQLSIKARRNCSNIGVAQI 88
The following BLAST results are available for this feature:
BLAST of EY692622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
METB_ARATH9.828e-3984.81Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-F05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692622 ID=EY692622; Name=EY692622; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCTTATCATAGAATACAGAGAGAGCAAAGCCGCCGTTCAA
TACGACGTCGTAATGGCCGTGTCCTCATGTTCGAGTCAAAAAATTTTGTC
CTTCTCTTCTTCATGTTCGTCTTTTGAGTGCCGTTCCGATCCCGACTTCT
CGGGCTCGGCTCGGTTTGATAAACCGAGGATCTCGGCGGCGCGAGTCATC
GGAGCGTCGACGGCGTCGTTTAGCGGCCTGTCGTCTCTGATTTTCAGGTT
TCCGCCGAACTTCGTGCGCCAGCTTAGCACGAAGGCCAGGAGGAACTGCA
GCAACATCGGCGTGGCGCAAATCGTGGCGGCTTCGTGGTCGAACGGTGTG
GGTTCCGGCTCTAACTCGGCGGCGGCTGCAGCAGCTTCCGCTGCCCCCGC
CCCGCCCGTCCCCGTCGAGATTACGAGCGGCGATGACATCGCGCTTGTTG
ACGGATTGAAAAATGTACATCTGGAGGCCCTCGCTGATTTGAAAAACGAG
GCTTCGTTTTTGAGCTCCGATGGGAGCCTTGCAATTCATGCCGGTGAAAG
ATTAGGTCGTGGTATAGTAACAGATGCAATTACTACCCCAGTGGTGAATA
CTTCTGCTTACTTCTTTAAGAAAACTGCTGAGCTTATTGATTTCAAGGAG
AAACGTCGTGCAAGTTTTGAATATGGGAGGTATGGAAACCCAACAACTGT
GGTCGTTGAGGAGAGATAAGTGCACTTGAGGGGGCTGAATNCACTGTGAT
TATGGCATCTGGAATGTGTGTAANCACAGTCATGTTGTTGGCATGGNTTC
CAGCGGTGGGCATATTGTGACAACACTGATTGCTACAGGAGACTAAGATT
TTCATTGGACTGGTCTGCCCAAATGGGAGTCACGCTACGG
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