EY692619

Overview
NameEY692619
Unique NameEY692619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.550e-39
Identity = 65/88 (73.86%), Postives = 75/88 (85.23%), Query Frame = 3
Query:  336 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPW 599
            CRDD+AAF LKFVAIASIL++G  GV IPLIG++RRFL+TDG+LFV  KAFAAGVILATGFVHML+GG+EAL NPCLP+F      PW
Sbjct:   18 CRDDSAAFLLKFVAIASILLAGAAGVTIPLIGRNRRFLQTDGNLFVTAKAFAAGVILATGFVHMLAGGTEALKNPCLPDF------PW 99          

HSP 2 Score: 52.7582 bits (125), Expect = 1.550e-39
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 1
Query:  589 PFPGFFRMVASLLTLLLDFVGTXYYEREQGLTRATREQGRVRSVD----EDSDSGICPGLEXXTXT*XLRG----GGRWSMHILGM-MHTRSHRH 846
            PFPGFF M+A+L+TL +DF+GT YYER+Q       E+    SV+    E S   + P +   T    + G    GG   +HI+G+  H   HRH
Sbjct:  103 PFPGFFAMIAALITLFVDFMGTQYYERKQ-------EREASESVEPFGREQSPGIVVPMIGEGTNDGKVFGEEDSGG---IHIVGIHAHAAHHRH 187          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.897e-31
Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 3
Query:  336 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPW-VFSHGGFASDAAS 638
            CRDD+AAF LKFVAIASIL++G  GVAIPLIG++RRFL+T+G+LFVA KAFAAGVILATGFVHML+GG+EAL NPCLP+F      PW  F   GF +  A+
Sbjct:   18 CRDDSAAFLLKFVAIASILLAGAAGVAIPLIGRNRRFLQTEGNLFVAAKAFAAGVILATGFVHMLAGGTEALSNPCLPDF------PWSKFPFPGFFAMVAA 113          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.733e-27
Identity = 47/74 (63.51%), Postives = 53/74 (71.62%), Query Frame = 3
Query:  378 IASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPW 599
            +ASILISG  GV+IPL+G     L  +G L    KAFAAGVILATGFVHMLSGGS+AL +PCLPEF      PW
Sbjct:    1 MASILISGAAGVSIPLVGT---LLPLNGGLMRGAKAFAAGVILATGFVHMLSGGSKALSDPCLPEF------PW 65          

HSP 2 Score: 58.151 bits (139), Expect = 1.733e-27
Identity = 48/123 (39.02%), Postives = 60/123 (48.78%), Query Frame = 1
Query:  589 PFPGFFRMVASLLTLLLDFVGTXYYEREQG--LTRATREQGRVRSVDEDSDSGICPGLEXXTXT*XLRGGGRWSMHILGM-MHTRSHRHIISWAPH----VRGREEVA*HGQA---PHGIPGL 927
            PFP FF MVA+LLTLL DF+ T YYER+Q   + ++    G   SV  D      PGLE         GG   ++HI+GM  H   HRH +S        +  R  V+ HG      HG  GL
Sbjct:   69 PFPEFFAMVAALLTLLADFMITGYYERKQEKMMNQSVESLGTQVSVMSD------PGLESGFLRDQEDGG---ALHIVGMRAHAEHHRHSLSMGAEGFEALSKRSGVSGHGHGHSHGHGDVGL 182          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.541e-16
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  354 AFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPE 572
            A  LK  +IA +L++G VGV++PLIGK    L+ +  +F   KAFAAGVIL TGFVH+L    E L +PCL +
Sbjct:   47 ATKLKLGSIALLLVAGGVGVSLPLIGKRIPALQPENDIFFMVKAFAAGVILCTGFVHILPDAFERLSSPCLED 119          

HSP 2 Score: 33.8834 bits (76), Expect = 3.541e-16
Identity = 18/51 (35.29%), Postives = 29/51 (56.86%), Query Frame = 1
Query:  589 PFPGFFRMVASLLTLLLDFVGTXYYEREQGLTRATREQGRVRSVDEDSDSG 741
            PF GF  M++++ TL++D   T YY+R+        +Q  V  VDE+  +G
Sbjct:  126 PFAGFVAMLSAMGTLMIDTFATGYYKRQHFSNNHGSKQVNV-VVDEEEHAG 175          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.991e-14
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 3
Query:  330 EDCRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPWVFSHGGFASDAAS 638
            +D  + A A   K  AI S+L +G++GV  PL+GK    LK + + F  TKAFAAGVILATGF+H+L  G E L +PCL   +G +   W F   GF +  A+
Sbjct:   37 DDEANKAGAKKYKIAAIPSVLAAGVIGVMFPLLGKFFPSLKPETTFFFVTKAFAAGVILATGFMHVLPEGYEKLTSPCL---KGEA---WEFPFTGFIAMVAA 133          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.436e-14
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  330 EDCRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPE 572
            + C D   A  LK VAI +IL++ ++GVA PL  ++  FL  DG +F+  K FA+G+IL TGF+H+L    E L +PCL +
Sbjct:   39 DSCIDKTKALPLKIVAIVAILVTSMIGVAAPLFSRYVTFLHPDGKIFMIIKCFASGIILGTGFMHVLPDSFEMLSSPCLED 119          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.291e-13
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 3
Query:  330 EDCRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPWVFSHGGFASDAAS 638
            +D  + A A   K  AI ++LI+GI+GV  PL+GK    L+ +   F  TKAFAAGVILATGF+H+L    E L++PCL      +   W F   GF +  A+
Sbjct:   42 DDHENKAGARKYKIAAIPTVLIAGIIGVLFPLLGKVFPSLRPETCFFFVTKAFAAGVILATGFMHVLPEAYEMLNSPCL------TSEAWEFPFTGFIAMIAA 138          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.366e-13
Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  342 DDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPW-VFSHGGFASDAAS 638
            + A+A   K +A  SILI+G+ GV +P+ G     LKT+ + F+  KAFAAGVILATGFVH+L   +E+L + CL    G  P PW  F   G  + AAS
Sbjct:   42 EKASALKYKIIAFFSILIAGVFGVCLPIFG-----LKTESNFFMYVKAFAAGVILATGFVHILPDATESLTSSCL----GEEP-PWGDFPMTGLVAMAAS 131          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.083e-12
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3
Query:  336 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPE 572
            C + A A  LK +AI  ILI+ ++GV  PL  ++  FL+ DG++F   K FA+G+IL TGF+H+L    E L + CL E
Sbjct:   34 CVNKAKALPLKVIAIFVILIASMIGVGAPLFSRNVSFLQPDGNIFTIIKCFASGIILGTGFMHVLPDSFEMLSSICLEE 112          
BLAST of EY692619 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  336 CRDDAAAFNLKFVAIASILISGIVGVAIPLIGKHRRFLKTDGSLFVATKAFAAGVILATGFVHMLSGGSEALDNPCLPEFRGPSPVPW-VFSHGGFAS 626
            C + A A  LK VAI +IL + ++GV  PL  ++  FL+ DG+ F+  K F++G+IL TGF+H+L    E L + CL      S  PW  F   GF +
Sbjct:   37 CINKAKALPLKIVAIVAILTTSLIGVTSPLFSRYISFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDSFEMLSSKCL------SDNPWHKFPFAGFVA 128          
The following BLAST results are available for this feature:
BLAST of EY692619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
IRT3_ARATH1.550e-3973.86Fe(2+) transport protein 3, chloroplastic OS=Arabi... [more]
ZIP4_ARATH8.897e-3168.63Zinc transporter 4, chloroplastic OS=Arabidopsis t... [more]
ZIP9_ARATH1.733e-2763.51Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9... [more]
ZIP1_ARATH3.541e-1650.68Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1... [more]
ZIP5_ARATH1.991e-1444.66Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5... [more]
ZIP8_ARATH4.436e-1444.44Probable zinc transporter 8 OS=Arabidopsis thalian... [more]
ZIP3_ARATH1.291e-1342.72Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3... [more]
ZIP12_ARATH8.366e-1346.00Probable zinc transporter 12 OS=Arabidopsis thalia... [more]
IRT1_ARATH7.083e-1244.30Fe(2+) transport protein 1 OS=Arabidopsis thaliana... [more]
IRT2_ARATH9.250e-1239.80Fe(2+) transport protein 2 OS=Arabidopsis thaliana... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-F02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692619 ID=EY692619; Name=EY692619; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGTTTTCATTTTCATTT
CATTTTCGGACGCCAATACCATTGCGTTTGTCTACGACGGGGCCCGATTC
CTTCTCGTGCTTGCTGATTAAACCCCATCACCATCTTCCATACTAATTAT
TAAAAAAAAAAAAAAAAGCTTTTCAGAATCTCGTTTCTCTTGCCATGTCA
TTCATCGAGGATCTCTGGGGATTGCGTTTTTTCGATCATTTTAGATCAAA
GACGAAAGCTTTTTCCGGTTCCTTTTTGCATGCGGTTTCTGATTCGATGA
TGAAGTCGAGCTGCGAGTCCTCGGACCGCGAAGACTGCCGTGACGACGCG
GCGGCCTTTAATCTCAAATTCGTCGCCATAGCCTCCATCCTCATTTCCGG
AATCGTCGGCGTCGCCATTCCGTTAATTGGGAAGCACCGCCGGTTCTTAA
AAACCGACGGCAGTCTGTTCGTCGCTACTAAAGCGTTTGCGGCCGGTGTC
ATTTTGGCTACGGGTTTTGTTCACATGTTATCTGGAGGATCCGAGGCGTT
GGATAACCCGTGTTTGCCCGAATTCCGTGGTCCAAGTCCCGTTCCCTGGG
TTTTTTCGCATGGTGGCTTCGCTTCTGACGCTGCTTCTGGACTTCGTGGG
GACACNATATTACGAGAGGGAACAGGGCCTGACCCGGGCTACCCGAGAGC
AGGGTCGGGTCCGGTCAGTGGATGAAGACTCGGATTCGGGTATTTGTCCC
GGTCTGGAAANTANGACNGNNACGTGANGTCTTCGGGGAGGAGGAAGGTG
GAGCATGCACATTTTGGGGATGATGCACACGCGCTCACATAGACATATCA
TCTCATGGGCACCCCATGTGAGGGGACGTGAAGAGGTGGCATGACACGGG
CAGGCTCCGCATGGCATCCCCGGTTTAAGGTGGG
back to top