EY692617

Overview
NameEY692617
Unique NameEY692617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9235 contig Csv1_Contig9235:1..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692617 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe GN=SPCC23B6.04c PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.066e-20
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  280 CLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYP*KAGHSISLQSP 711
            C+ RYL A  W+V  AKK + +TL WR  +    +  +EI  E  TGK    G+ D+ GR  L L P  QNT +   Q+RHLV+ +E AI  +P G E +A LI+F   S  ++  +   +E +NILQ HY  + G ++ +  P
Sbjct:  637 CILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLLGY-DKDGRPCLYLYPARQNTKTSPLQIRHLVFSLECAIDLMPPGVETLALLINFKSSSNRSNPSVGQGKEVLNILQTHYCERLGRALVINIP 779          
BLAST of EY692617 vs. ExPASy Swiss-Prot
Match: PDR17_YEAST (Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae GN=PDR17 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.247e-16
Identity = 55/161 (34.16%), Postives = 83/161 (51.55%), Query Frame = 1
Query:  265 YCSDACLKRYLEARNWNVDKAKKMLEETLKWRS----TYRPEE---IRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGWS-----LSTSVPIRSARETINILQNHYP*KAGHSISLQSP 711
            + S  C  RYL A  WN   A K L +TL WR     T+  E+   +  +++AVE ETGK    GF D   R +  ++ G QNT S   Q++ LVY++E A    P+G E++  L+DF  +         + PI  AR  +N++Q+HYP +    + +  P
Sbjct:   89 WLSRECFLRYLRANKWNTANAIKGLTKTLVWRREIGLTHGKEDKDPLTADKVAVENETGKQVILGF-DNAKRPLYYMKNGRQNTESSFRQVQELVYMMETATTVAPQGVEKITVLVDFKSYKEPGIITDKAPPISIARMCLNVMQDHYPERLAKCVLINIP 248          
BLAST of EY692617 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 51/174 (29.31%), Postives = 98/174 (56.32%), Query Frame = 1
Query:  217 KELKAAIGPLYGRS-LQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTYRPEEIR-WNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQM--RHLVYLIENAI--LNLPEGQEQMAWLIDFTGWSLSTSVPIRSARETINILQNHYP*KAGHSISLQSPTXF 720
            KE+K+    L   + + +C+D C  RYL ARN+ V K++KML +TL+WR  +RP++I+   +I   G  G ++     D+ GR ++   P      ++ +++  ++LVY +E     ++ P+G EQ  +++D+  +  S ++ +++  E ++ L +H P + G S+ L  P  F
Sbjct:   53 KEIKSNFSDLTDPTDIAFCTDMCFLRYLRARNYIVSKSEKMLRDTLEWRKKFRPQDIQLGGDIREIGSAGCVY-VNKRDKKGRPIIFAVPRNDTLKNVPSELKFKNLVYWLEQGFSRMDEPKGIEQFCFIVDYKDFG-SGNMDMKTNLEAMHFLLDHCPERMGQSLFLDPPALF 224          
BLAST of EY692617 vs. ExPASy Swiss-Prot
Match: PDR16_YEAST (Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae GN=PDR16 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 1
Query:  241 PLYGRSLQYCSDACLKRYLEARNWNVDKAKKMLEETLKWRSTY--------RPEEIRWNEIAVEGETGKLFRAGFHDRHGRTVLILRPGMQNTASIDNQMRHLVYLIENAILNLPEGQEQMAWLIDFTGW-------SLSTSVPIRSARETINILQNHYP*KAGHSISLQSP 711
            PL      + +  C  RYL A  W +      +  TL WR  +          ++I  + +AVE E+GK    G+ +   R +L L+PG QNT +   Q++HLV+++E  I  +P GQ+ +A LIDF  +         S   PI   +E ++ILQ HYP + G ++    P
Sbjct:   76 PLEEEEKAWLTRECFLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILGY-ENDARPILYLKPGRQNTKTSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDVPKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIP 246          
The following BLAST results are available for this feature:
BLAST of EY692617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
YJX4_SCHPO7.066e-2038.19CRAL-TRIO domain-containing protein C23B6.04c OS=S... [more]
PDR17_YEAST1.247e-1634.16Phosphatidylinositol transfer protein PDR17 OS=Sac... [more]
RSC5_DICDI1.629e-1629.31Random slug protein 5 OS=Dictyostelium discoideum ... [more]
PDR16_YEAST1.629e-1631.40Phosphatidylinositol transfer protein PDR16 OS=Sac... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-E12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692617 ID=EY692617; Name=EY692617; organism=Citrus sinensis; type=EST; length=931bp
CCACGCGTCCGCGGACGCGTGGGTTTTTAGTAAATTTTGTATTCGTTTCG
TCAACTCCATCTTCCTCAAAATCAGATTCATAGACAAAGCATTACCACGG
TGTTTCTATCTCCTTCTCCAGGTTGACTCGATTGCTAAATTGTGGGATCA
GTTGCCATGTTTCGCAAGAAGAATAACACTCAGGAGAGTGAGGAGCACCA
TCATGAGTCAAAGGTCAAGGAGCTTAAGGCTGCGATCGGACCACTTTATG
GACGTAGTTTGCAGTATTGCTCTGATGCATGCTTGAAGAGATATCTGGAG
GCTCGAAACTGGAATGTGGACAAAGCAAAGAAAATGTTGGAAGAGACACT
CAAATGGAGGTCAACCTACAGGCCGGAGGAAATCCGTTGGAATGAAATTG
CAGTTGAAGGTGAGACCGGAAAGTTATTTAGAGCTGGTTTTCATGACCGA
CATGGCAGGACTGTTCTCATATTGAGACCCGGAATGCAGAACACTGCATC
AATAGACAATCAGATGAGACACCTAGTCTATCTCATAGAGAATGCTATCC
TAAACCTTCCAGAGGGTCAGGAACAAATGGCATGGTTAATAGACTTCACT
GGGTGGTCATTGAGCACCAGCGTCCCTATCAGGTCTGCTCGAGAAACTAT
CAATATATTACAAAATCACTACCCCTGAAAGGCTGGCCATAGCATTTCTC
TACAATCCCCCACGGANTTTTGAAGCATTTTGGNAANGNNTGTCAGTATT
TCTGGGATGCCAAAACATTCCAAAAGGTGAANNTTGTATATCCCAAGAAT
AAGACAGCGTGGAAGTCATGAGTTCATATTTTGNATGAGAAATCTTCCGA
CTGAGTTTGGANGAAAGGCACATTGCATTATGACCATGAGAGTTTCCCAA
TTATGATTCAGATGATTCAAATCAGCACATG
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