EY692603

Overview
NameEY692603
Unique NameEY692603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692603_ssr122 microsatellite EY692603_ssr122:122..133. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3602 contig Csv1_Contig3602:30..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692603 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.488e-13
Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 2 
Query:  209 QSKEELLYQQVNYGNVEGIKALCRDGAGLEWIDKEGKTPLIAACMNPGLYDVAKTLIELGAKVDAYRPGRHGGTPLHHAAKRGLERTVKLLLSYGANALVLNDDCQTPLEVARAKGFTNVVRAIE 583
            + +E +++Q  + G+VEG+KA    G   +  D EG+T L  AC   G    A+ LI+ GA V+A    ++  TPLH+AA  G +  V LLL  GA   + N D +TP++VA+      VV+ +E
Sbjct:  216 EEEESIVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFAC-GYGELKCAQVLIDAGASVNAVDKNKN--TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 337
[Close]
BLAST of EY692603 vs. ExPASy Swiss-Prot
Match: ANR11_HUMAN (Ankyrin repeat domain-containing protein 11 OS=Homo sapiens GN=ANKRD11 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 48/118 (40.68%), Postives = 62/118 (52.54%), Query Frame = 2 
Query:  218 EELLYQQVNYGNVEGIKALCRDGAGLEWIDKEGKTPLIAACMNPGLYDVAKTLIELGAKVDAYRPGRHGGTPLHHAAKRGLERTVKLLLSYGANALVLNDDCQTPLEVARAKGFTNVV 571
            E  L++    G+   IK L  +GA +   D  G T L  AC N G YDVAK L+  GA+V+    G    TPLH AA  G  + VKLLL YG N    N   +TPL+VA +    N++
Sbjct:  169 ETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEAC-NRGYYDVAKQLLAAGAEVNT--KGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVANSPTMVNLL 283
The following BLAST results are available for this feature:
BLAST of EY692603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AKR2_ARATH7.488e-1336.80Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
ANR11_HUMAN6.339e-1240.68Ankyrin repeat domain-containing protein 11 OS=Hom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-D10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692603 ID=EY692603; Name=EY692603; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGGCAATTCAATTCTTCTCTGCTAAGAAACCTTTCCTCAAA
AATTTTAAATAATTATAATTTTATTTATTCTTCCTCTTTCCTATCTGTAT
TTATTTACTCGTTTTCCTTGCAATTAATTAATTTATAAACCAAAAAGTAA
GCTGCATTTTCCCGGCGGATTTTCATTTTCCTGGGAAACAAACACGATGG
GGCTGCAACAATCCAAGGAGGAGTTGCTGTATCAACAAGTTAATTACGGG
AACGTCGAAGGCATCAAAGCTCTTTGCCGAGACGGCGCTGGCCTCGAGTG
GATTGATAAAGAAGGGAAAACGCCGTTGATTGCGGCGTGTATGAACCCAG
GGCTTTATGATGTGGCCAAAACTTTGATCGAGCTTGGGGCTAAAGTCGAT
GCTTATCGTCCCGGACGTCATGGTGGGACTCCTTTACATCATGCAGCTAA
AAGAGGCCTCGAAAGAACTGTAAAGTTACTTCTTTCGTATGGAGCGAATG
CATTAGTACTGAATGATGATTGTCAAACTCCTCTTGAGGTTGCTAGAGCC
AAAGGGTTCACCAATGTTGTACGTGCAATTGAGAATCACATCTGCATATT
CTCTGGCTGGTTGCGAGAGCTTTATGGACCAGGATTTCTTGAATTATTAG
CCCCTCAGATGCTTTCAAGAAAAGTGTGGCTGGGTTGCTGTCTTGCCAAC
TGGGTCCCGTAACCGTACAAAGCCTTTCAAGTGGAAGCTTGCATATATCC
TAGTTNGCTGGATGCCGACCACGCATGGTTATTGGTCTGTGGAAAGCAAT
TTGGAGAACAAAATTCAGCATTCTGACTGTCCGTGACATTTGTGACACTC
CACATTTCAGACGCA
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