EY692566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 4.361e-95 Identity = 156/176 (88.64%), Postives = 163/176 (92.61%), Query Frame = 2 Query: 149 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFE 676 E ARQI+G+R +QS T RK SFVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG E Sbjct: 17 EAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE 189 HSP 2 Score: 49.2914 bits (116), Expect = 4.361e-95 Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 3 Query: 729 PSGSWEDEKSMKDFKLKEVKNGRXACWH-LGLLCSRSCTGVGPYKT-YGSLADP 884 P G +DEKSMK+ KLKE+KNGR A LG TGVGPY+ LADP Sbjct: 208 PLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADP 261
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 1.656e-91 Identity = 153/177 (86.44%), Postives = 158/177 (89.27%), Query Frame = 2 Query: 149 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFE 676 E RQ ARS S G SRKG +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGAIAPE LGK GLIPQETALAWFQTGVIPPAGTYNYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMG+QYFLG E Sbjct: 17 EAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLE 191 HSP 2 Score: 46.9802 bits (110), Expect = 1.656e-91 Identity = 28/54 (51.85%), Postives = 33/54 (61.11%), Query Frame = 3 Query: 729 PSGSWEDEKSMKDFKLKEVKNGRXACWH-LGLLCSRSCTGVGPYKT-YGSLADP 884 P G +DEKS+K+ KLKEVKNGR A LG TGVGPY+ +ADP Sbjct: 210 PLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADP 263
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.880e-26 Identity = 69/166 (41.57%), Postives = 89/166 (53.61%), Query Frame = 2 Query: 164 ILGARSAQSPTGSS-RKGSFVV----RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPG 643 I+GA A G R F+ R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G PE L K G++ +W+ AG Y+ D TLFV+E+ L+G+AE RR+ D PG Sbjct: 26 IVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVL---NTPSWY------TAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176 HSP 2 Score: 30.0314 bits (66), Expect = 1.880e-26 Identity = 21/62 (33.87%), Postives = 27/62 (43.55%), Query Frame = 3 Query: 729 PSGSWEDE--------KSMKDFKLKEVKNGRXACWH-LGLLCSRSCTGVGPY-KTYGSLADP 884 P G W D +K+ + KE+KNGR A +G TG GP + LADP Sbjct: 197 PGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.146e-26 Identity = 61/140 (43.57%), Postives = 82/140 (58.57%), Query Frame = 2 Query: 227 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPG 643 R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G PE+L K G++ +W+ AG Y+ D TLF++E+ L+G+AE RR+ D PG Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTKIGIL---NTPSWY------TAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176 HSP 2 Score: 30.0314 bits (66), Expect = 9.146e-26 Identity = 21/62 (33.87%), Postives = 27/62 (43.55%), Query Frame = 3 Query: 729 PSGSWEDE--------KSMKDFKLKEVKNGRXACWH-LGLLCSRSCTGVGPY-KTYGSLADP 884 P G W D +K+ + KE+KNGR A +G TG GP + LADP Sbjct: 197 PGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.039e-20 Identity = 59/143 (41.26%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 230 AASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGR 655 +A T K A + W S YL GSL GD GFDPLGL+ DPE KW E++NGR+AMLG G + PE+ K G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + Sbjct: 42 SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQ 169
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.582e-20 Identity = 63/156 (40.38%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 191 PTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGR 655 P G S SF V A K+G W S YL GSLPGD GFDPLGL+ DPE +W E++NGR+AMLG G + PE+ G+I W+ AG Y+A TLFV+E L + E RR+QD NPGS+ + Sbjct: 38 PVGCSPSASFKVEA------KKGE----WLPGLASPGYLTGSLPGDNGFDPLGLAEDPENL------RWFVQAELVNGRWAMLGVAGMLLPEVFTSIGII---NVPKWY------AAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQ 168
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.259e-16 Identity = 54/133 (40.60%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 257 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTG-VIPPAGTYNYWADP--------YTLFVLEMALMGFAEHRR 619 G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PEIL K G+ E WF+ G I G +Y +P ++ ++ LMGF E R Sbjct: 51 GEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFARNREL---EVIHCRWAMLGALGCVFPEILSKNGVTFGEA--VWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYR 175 HSP 2 Score: 36.965 bits (84), Expect = 1.259e-16 Identity = 20/57 (35.09%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 720 SIQPSGSWEDEKSMKDFKLKEVKNGRXACWHL-GLLCSRSCTGVGPYKT-YGSLADP 884 + P G +D ++ + K+KE+KNGR A + + G TG GP + Y +ADP Sbjct: 193 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADP 249
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.588e-16 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 275 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWANPGSMGR 655 W QS +YLDGSL GD GFDPL L+ DPE + +W +V+NGR+AMLG G + PE+L KAGL+ A W + G Y+A T + M+ + E RR+QD NPGS+ + Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPE------DLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLM---NAPEWLRL-----PGKETYFASSSTALRVHMS-STYVEIRRWQDIKNPGSVNQ 148
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.765e-16 Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 2 Query: 257 GADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRR 619 GADRP + S+Q+ SYL G PGDYG+D GLS DPE F + + L EVI+ R+AMLGA+G I PE+L K G+ Q WF+ G I G +Y +P ++ ++ LMG E R Sbjct: 50 GADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCIFPELLSKNGV--QFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYR 174 HSP 2 Score: 35.039 bits (79), Expect = 2.765e-16 Identity = 19/57 (33.33%), Postives = 30/57 (52.63%), Query Frame = 3 Query: 720 SIQPSGSWEDEKSMKDFKLKEVKNGRXACWHL-GLLCSRSCTGVGPYKTYGS-LADP 884 + P G +D ++ + K+KE+KNGR A + + G TG GP + +ADP Sbjct: 192 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADP 248
BLAST of EY692566 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.593e-16 Identity = 58/169 (34.32%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 149 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRR 619 E +R++LG A+ + V ++A + + GADRP + S ++ SYL+G GDYG+D GLS DPE F + L EVI+ R+AMLGA+G + PE+L K+G+ E WF+ G I G +Y +P ++ ++ LMG E R Sbjct: 23 ELSRKVLGNVEARVTMRRT-----VSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPET---FARNREL---EVIHARWAMLGALGCLTPELLAKSGVKFGEA--VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 178 HSP 2 Score: 36.1946 bits (82), Expect = 3.593e-16 Identity = 21/57 (36.84%), Postives = 29/57 (50.88%), Query Frame = 3 Query: 720 SIQPSGSWEDEKSMKDFKLKEVKNGRXACWHL-GLLCSRSCTGVGPYKTYGS-LADP 884 S P G +D + + K+KE+KNGR A + + G TG GP + LADP Sbjct: 196 SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADP 252 The following BLAST results are available for this feature:
BLAST of EY692566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692566 ID=EY692566; Name=EY692566; organism=Citrus sinensis; type=EST; length=888bpback to top |