EY692543

Overview
NameEY692543
Unique NameEY692543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692543 vs. ExPASy Swiss-Prot
Match: Y3748_BRUSU (Putative binding protein BRA0748 OS=Brucella suis GN=BRA0748 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 58/186 (31.18%), Postives = 93/186 (50.00%), Query Frame = -2
Query:    1 FEAAT-GIKVAYQYVPYGQLLEKLTTEAVGGGSAYDLMAYQDSWLASL--SGYLSPLDARLADGVVDLGRYPEVYRKACQYGGATYGLPVRAHPQLLFYRRDLYEQAGVE-PPRTWDQMLTAATAVQAASGVPGVVMDY---VKGSGFQNLWIWLNCLWGHGAEVLDADGRPSFQLPAGVQATQAY 537
            FEA   GI + ++ VP+  LL+KLTT+   G +A DL      WL      G   PLD  + D     GR+ E +       G TYGLP+ A  + ++Y +DL+E+AG++ PP  WD++   A  ++A  G      +Y   ++G   +    +   +W +G E+L+ DG      P  ++A + Y
Sbjct:   50 FEAENPGITLNFEVVPWDVLLQKLTTDISAGTNA-DLSIIGTRWLIDFVQQGIAEPLDGYMNDEFK--GRFIETFLSPSVLDGKTYGLPIAASARAMYYNKDLFEKAGIKNPPANWDELKADAAKIKALGG-----ENYGFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLY 227          
BLAST of EY692543 vs. ExPASy Swiss-Prot
Match: Y2991_BRUA2 (Putative binding protein BAB2_0491 OS=Brucella abortus (strain 2308) GN=BAB2_0491 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 58/186 (31.18%), Postives = 93/186 (50.00%), Query Frame = -2
Query:    1 FEAAT-GIKVAYQYVPYGQLLEKLTTEAVGGGSAYDLMAYQDSWLASL--SGYLSPLDARLADGVVDLGRYPEVYRKACQYGGATYGLPVRAHPQLLFYRRDLYEQAGVE-PPRTWDQMLTAATAVQAASGVPGVVMDY---VKGSGFQNLWIWLNCLWGHGAEVLDADGRPSFQLPAGVQATQAY 537
            FEA   GI + ++ VP+  LL+KLTT+   G +A DL      WL      G   PLD  + D     GR+ E +       G TYGLP+ A  + ++Y +DL+E+AG++ PP  WD++   A  ++A  G      +Y   ++G   +    +   +W +G E+L+ DG      P  ++A + Y
Sbjct:   50 FEAENPGITLNFEVVPWDVLLQKLTTDISAGTNA-DLSIIGTRWLIDFVQQGIAEPLDGYMNDEFK--GRFIETFLSPSVLDGKTYGLPIAASARAMYYNKDLFEKAGIKNPPANWDELKADAAKIKALGG-----ENYGFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLY 227          
BLAST of EY692543 vs. ExPASy Swiss-Prot
Match: Y2784_BRUAB (Putative binding protein BruAb2_0484 OS=Brucella abortus GN=BruAb2_0484 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18
Identity = 58/186 (31.18%), Postives = 93/186 (50.00%), Query Frame = -2
Query:    1 FEAAT-GIKVAYQYVPYGQLLEKLTTEAVGGGSAYDLMAYQDSWLASL--SGYLSPLDARLADGVVDLGRYPEVYRKACQYGGATYGLPVRAHPQLLFYRRDLYEQAGVE-PPRTWDQMLTAATAVQAASGVPGVVMDY---VKGSGFQNLWIWLNCLWGHGAEVLDADGRPSFQLPAGVQATQAY 537
            FEA   GI + ++ VP+  LL+KLTT+   G +A DL      WL      G   PLD  + D     GR+ E +       G TYGLP+ A  + ++Y +DL+E+AG++ PP  WD++   A  ++A  G      +Y   ++G   +    +   +W +G E+L+ DG      P  ++A + Y
Sbjct:   50 FEAENPGITLNFEVVPWDVLLQKLTTDISAGTNA-DLSIIGTRWLIDFVQQGIAEPLDGYMNDEFK--GRFIETFLSPSVLDGKTYGLPIAASARAMYYNKDLFEKAGIKNPPANWDELKADAAKIKALGG-----ENYGFGLQGKEIETDVYYYYAMWSYGTEILNKDGTSGLSTPGALEAAKLY 227          
BLAST of EY692543 vs. ExPASy Swiss-Prot
Match: Y4OP_RHISN (Probable amino-acid ABC transporter periplasmic-binding protein y4oP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02200 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 63/234 (26.92%), Postives = 101/234 (43.16%), Query Frame = -2
Query:   16 LPAPGGAPCRLVRRPAGTLKPGRPYAGTRLAIMLPPSSQFRAQEKRLDEFEAATGIKVAYQYVPYGQLLEKLTTEAVGGGSAYDLMAYQDSWLASLSGYLSPLD--ARLADGVVDLG--RYP----EVYRKACQYGGATYGLPVRAHPQLLFYRRDLYEQAGVEP---PRTWDQMLTAATAVQAASGVPGVVMDYVKGSGFQNLWIWLNCLWGHGAEVLDADGRPSFQLPAGVQ 684
            LP  G +  R   + A    P + Y+G ++  +    + F A      +F  ATGI V Y  + Y +  +KL  +   G +++D+  +   W   +  Y + L    +   G  DL    YP    E+Y +A        GLP      L  + ++ Y+ AG++P   P+TWD+++    A   ++G  G  M    G G Q    W+      G E  DA G P+F   AGV+
Sbjct:   13 LPFLGSSLTRAFAQDAAASLP-KTYSGQKIRALASTGAAFEAMATVSRDFTEATGIAVEYVNLSYNEQYQKLILDLTSGAASFDVFNFAYQWKFEIEPYCADLANIPKEIQGAPDLALDDYPQRALEIYGRA---NNKLIGLPTLGDVTLFVWNKEAYKAAGLDPDAAPKTWDEVVERG-AKLVSNGQFGYAMP--AGKGIQTTVTWIMVFKSMGGEYFDASGAPTFASEAGVK 239          
The following BLAST results are available for this feature:
BLAST of EY692543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
Y3748_BRUSU2.350e-1831.18Putative binding protein BRA0748 OS=Brucella suis ... [more]
Y2991_BRUA22.350e-1831.18Putative binding protein BAB2_0491 OS=Brucella abo... [more]
Y2784_BRUAB2.350e-1831.18Putative binding protein BruAb2_0484 OS=Brucella a... [more]
Y4OP_RHISN5.417e-1526.92Probable amino-acid ABC transporter periplasmic-bi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-G07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692543 ID=EY692543; Name=EY692543; organism=Citrus sinensis; type=EST; length=685bp
ATAGGCCTGGGTGGCCTGCACGCCGGCCGGCAGCTGAAAGGACGGCCTGC
CGTCGGCATCCAGCACCTCGGCGCCGTGGCCCCACAGGCAATTCAGCCAG
ATCCACAGATTCTGGAAGCCGCTGCCCTTGACGTAGTCCATCACCACGCC
CGGCACGCCGCTGGCGGCCTGCACCGCGGTCGCCGCGGTCAGCATCTGGT
CCCAGGTGCGCGGCGGCTCGACGCCGGCCTGCTCGTACAGGTCACGCCGG
TAGAACAGCAATTGGGGATGGGCCCGCACCGGCAAGCCATAGGTGGCGCC
GCCATACTGGCAGGCCTTGCGATAGACCTCGGGATAACGCCCCAGATCCA
CCACGCCATCGGCCAGCCGCGCGTCCAGCGGGCTGAGGTACCCCGACAGC
GACGCCAGCCAGCTGTCCTGGTAGGCCATCAGGTCATAAGCGCTGCCGCC
GCCGACCGCTTCCGTCGTCAGCTTCTCCAGCAACTGGCCATAAGGCACGT
ACTGATAGGCCACCTTGATGCCCGTGGCCGCCTCGAACTCGTCCAGGCGC
TTCTCCTGTGCCCGGAACTGCGACGACGGCGGCAGCATGATCGCCAGTCG
CGTGCCGGCATAGGGCCTGCCCGGCTTCAGGGTCCCGGCCGGCCTGCGNA
CCAGCCGGCATGGCGCTCCACCCGGAGCAGGCAGC
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