EY692506

Overview
NameEY692506
Unique NameEY692506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692506 vs. ExPASy Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.442e-37
Identity = 72/86 (83.72%), Postives = 81/86 (94.19%), Query Frame = 1
Query:  382 MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQIRSHAQKFFSKLEKEALSKGVPIGQA 639
            M+T SSGEDLV+KTRKPYTITKQRERWTEEEHNRF+EAL+LYGRAWQ+IEEH+ TK AVQIRSHAQKFFSK+EKEA +KGV +GQA
Sbjct:    1 METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAKGVAMGQA 86          

HSP 2 Score: 25.0238 bits (53), Expect = 1.442e-37
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  672 KEPRNPYPSKT-CXNAPMSQIGSKDG 746
            ++P NPYP KT      MS+ G  DG
Sbjct:   98 RKPNNPYPRKTGSGTILMSKTGVNDG 123          
BLAST of EY692506 vs. ExPASy Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.405e-35
Identity = 70/86 (81.40%), Postives = 78/86 (90.70%), Query Frame = 1
Query:  382 MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQIRSHAQKFFSKLEKEALSKGVPIGQA 639
            MDT +SGE+L+ K RKPYTITKQRERWTE+EH RFLEAL+LYGRAWQRIEEHIGTK AVQIRSHAQKFF+KLEKEA  KG+P+ QA
Sbjct:    1 MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQA 86          
BLAST of EY692506 vs. ExPASy Swiss-Prot
Match: MYBG_DICDI (Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.557e-19
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query:  415 LKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQIRSHAQKFFSKLEKEALSKGVP 627
            LK+RKPYTI+KQRE WT+EEH +FLEAL L+ R W++IE  +G+K  +QIRSHAQK+F K++K    + +P
Sbjct:   29 LKSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERIP 99          
The following BLAST results are available for this feature:
BLAST of EY692506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CCA1_ARATH1.442e-3783.72Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 ... [more]
LHY_ARATH7.405e-3581.40Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV... [more]
MYBG_DICDI2.557e-1957.75Myb-like protein G OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-D05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692506 ID=EY692506; Name=EY692506; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGGCTTCTTTTCTCTTCAACTTCTTCATTTATCTAGATAAT
TTAAACAAATAGTTTTTTTTTTGTAAACTGTTTCCGATTCAGATCCACCG
TTGCCGGTAATCATGATTCCTCCGGCAAGTCGCAGGTGAATTCTGTTCAT
GCGCTCTATCGATGCAGCCGGGCTTCTAGTACATCATGGCTTTCTCGAAG
GGTTTTGGCATCTACGGGTTCGTTTTGTAGTGTTGCCTTATCAGGTTCTG
TCAACCATTACTATAACAACGGCTTTGTCATTTGATACTGTAAGAAGAAA
TGAAGGGAGGGTTTTGTTTTACCCACTGCTTGTTAGAGAGGATTTGAAGC
AGCGCTAGCTGCTAGCTGCCTGACTTTGGTTATGGACACCTACTCCTCTG
GCGAAGACTTGGTTCTTAAGACAAGGAAGCCATATACAATTACGAAGCAA
CGTGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTAGAAGCGCTGAA
GCTTTATGGCCGTGCTTGGCAACGCATAGAAGAACATATAGGGACAAAGA
AAGCTGTGCAGATCAGAAGTCATGCACAAAAATTCTTTTCCAAGTTGGAG
AAGGAGGCTCTTTCTAAAGGGGTTCCTATAGGTCAAGCAATTGACATAGA
CATTCCTCCTCCACGTCCCTAAAGGAACCACGCAATCCTTATCCCTCGAA
GACCTGCANCAATGCTCCTATGTCACAGATAGGGAGCAAGGATGGGAACT
TTCGAGNTCAGTTTCTTTCTTGCGTTGCAATCAGTGCTGGACTTGGAGAA
GACCNATTTGTGATAGGCTAATGTGATGAGAGCCACTTTACTATCGAAGT
CAGAAGCNACTGCTCGAAGTGTTATACTGCAACAGAGCTCCTGTTCC
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