EY692505

Overview
NameEY692505
Unique NameEY692505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig851 contig Csv1_Contig851:163..1064. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY692505 vs. ExPASy Swiss-Prot
Match: Y1491_ARATH (DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 4.060e-14
Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 3 
Query:  423 RPSANAKQSDLWLPLANQGWR-SCAQSANNPSLPQKSQGYIQVFLDGGLNQQRMVICDAVAVTKILNEHL 629
            RPS      +LW    + GWR S A  ++ P   +++ GY++V  +GGLNQQR  IC+AV   +I+N  L
Sbjct:   53 RPS-KINVEELWESAKSGGWRPSSAPRSDWPPPTKETNGYLRVRCNGGLNQQRSAICNAVLAARIMNATL 121

HSP 2 Score: 49.2914 bits (116), Expect = 4.060e-14
Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 2 
Query:  623 TLVIPYLEVNPVWQDSKSFMDIYDVDHFINVLKDDISIV 739
            TLV+P L+ N  W D   F  IYDV+HFI  LK D+ IV
Sbjct:  120 TLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIV 158
The following BLAST results are available for this feature:
BLAST of EY692505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1491_ARATH4.060e-1440.00DUF246 domain-containing protein At1g04910 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-D04-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692505 ID=EY692505; Name=EY692505; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGGATGATACATGTGATAATGGCCGCTGCTTTTTGCTGTTG
CCATTGATTGTCTTTTTTTTTTCTTATTTCTTGGTTATTGGATTGGTTTT
CGCTATCACTCATATATAGGGCGACGAAGTTATTTTGATCTGGGAGGCCC
TGAGCTTTCAGAAAATGAAGTTTCAGTACAAGAGTAATGATTACCACCAG
CCTCAAAGAAATGGAGCTCTTGCTGGGCTGTTGGTGCTTCTTTTTCCAGT
TTTATTGCCTAGTTTGTTCAGCCCATTAAGCCATGCCTCGCCTTCTATGT
TCTCGGAATGGAATGGTCCAAAACCTAGGCACCTGCCTCTGCTCAAGAGT
GCTTTGCAACACCAGAAAGAACCAAATGCTCCTAAGCCTAGGCACTTACC
TCTGTTCAAGAGTGCTTTACAGCGCCCAAGTGCAAATGCCAAGCAGTCTG
ATCTCTGGCTACCTTTGGCCAACCAAGGATGGAGATCATGTGCTCAATCT
GCAAATAATCCTTCATTACCTCAGAAATCTCAAGGATACATTCAGGTATT
TCTTGATGGAGGGTTAAACCAGCAGAGAATGGTGATATGTGATGCAGTTG
CTGTTACAAAAATTCTGAATGAACACTTGTGATCCCATATCTTGAAGTAA
ATCCTGTTTGGCAGGATTCAAAGTCCTTCATGGATATATATGATGTCGAT
CACTTTATTAATGTATTAAAAGATGATATTTCTATTGTCGAAGACTTCCT
AATGAGTTTTCTTGGAGCACGAAGGAGTATATGCCACTGCTATTCGTGCC
ACAAGATCAGACAGCACAGTTCATGCTCAGCTACTGGTACTAAAGATGTC
TTGCCGTACTCCAAAGTATGGGTTGCTGCATTCCCCATCCCTCA
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