EY692498

Overview
NameEY692498
Unique NameEY692498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692498 vs. ExPASy Swiss-Prot
Match: KATAM_ARATH (Xyloglucan galactosyltransferase KATAMARI1 OS=Arabidopsis thaliana GN=KAM1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.301e-15
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 1 
Query:  523 GSREEHQNRLCFLVTLSAFFWILLLYFHFIVLGTNNVSESNQLETSIKNSESSFVHLTNDDHLAEPSEGTTQP 741
            G+ +   NR+C LV LS FFW LLLYFHF+VLGT+N+ +  QL+ S   S+ S V L  D    EP    ++P
Sbjct:   23 GNGKNQTNRICLLVALSLFFWALLLYFHFVVLGTSNIDKQLQLQPSYAQSQPSSVSLRVDKFPIEPHAAPSKP 95

HSP 2 Score: 30.8018 bits (68), Expect = 6.301e-15
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 2 
Query:  476 MRRRVAASGPTEQMDKGAGKN 538
            MRRR A   PTE M+KG GKN
Sbjct:    7 MRRRSAEVSPTEPMEKGNGKN 27
The following BLAST results are available for this feature:
BLAST of EY692498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KATAM_ARATH6.301e-1546.58Xyloglucan galactosyltransferase KATAMARI1 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-C09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692498 ID=EY692498; Name=EY692498; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCAAATCAAATTAAATATCTTGTAAGTTTATTTCTCTCCT
CTGTTTTCCTCTTTTGCTTTCTTAATTTTTCTATCATTTCTGTCCTTGAA
TTCTTTCTGTTTTGCTGCTGACATGTCCGTAACAGATCATATGTAGCCCT
CATTTTCTCATCATTTATGTTGAATCGTCGGTTTGTTCTTGAAAATCAAG
ATCCTCTTCTTTTGATTTGATAGTTCAGTTACCCTTTTGGTGATTAGTCG
GTTACAGTTTAAAAGTTTTTTTTTTTTTTTATCTTTGTTGTATTTAAGCT
TCATTTCCGGAGACTTAAGCTGAACTATCGAAACTAGGGTTAGGGTTTGT
CATTTTTTGTAATTTACGTGGTTTTGCGAGTTGTGGGTGTTAGATTATAA
CTGGGTTTGTGAGTGTTTTTGGTGAAATGGGAAGTTGTTTGATTGGTTGA
TTTATTTGGGGAAATTTAGAATCTGATGAGACGCCGGGTGGCGGCGAGTG
GCCCGACAGAGCAAATGGATAAGGGAGCCGGGAAGAACATCAAAATAGGC
TATGTTTTTTAGTTACATTGTCTGCTTTCTTTTGGATTCTGTTGTTGTAC
TTTCATTTTATTGTGCTCGGGACTAATAATGTTAGTGAATCTAACCAATT
GGAAACCAGTATCAAAAACTCAGAATCTTCTTTTGTCCATTTAACTAATG
ATGATCATCTAGCAGAACCCTCGGAGGGAACCACCCAGCCTAGCACTTTT
CGTGAATCTACTGATTCACATTTCAACCAGTTAATCCAGACCCACTAACC
CTGAACAGTCGTTCATGATCTCCCCNATCACATCCAACCCATTAACCCAG
AACCATTGTTCATCATCTCCGCATCACACCAATCCCGTATTCAGAACC
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