EY713220

Overview
NameEY713220
Unique NameEY713220
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY713220 vs. ExPASy Swiss-Prot
Match: ULP2_SCHPO (Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe GN=ulp2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.285e-21
Identity = 69/220 (31.36%), Postives = 103/220 (46.82%), Query Frame = 2
Query:   35 VVYPEGDSDAVSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKXXXXXXXXXXXX---KLADLDKDPSSISDGKAAFLR-VRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICH-----PGDV----------------ASFKVEDLKRSEKVPCILHMDSIKGTHAGLKKLVQSYLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCG 619
            +VYP   +++++I+  D+  L    F+NDTI+DFY++YL  ++Q +                 +L   DKD      GK    R VRKWT+KVD+F K YI +P+N   HW L +IC+     P D                 ++ K    + +   P IL  DS+   H G    ++ YL EE  ER     ++V  K  + R    ++PQQ N  DCG
Sbjct:  351 LVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTFFYNRLTSKDKD------GKRLGHRGVRKWTQKVDLFHKKYIIVPINETFHWYLAIICNIDRLMPVDTKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYLLEEAFER-----KNVHLKSTDIRGFHAKVPQQSNFSDCG 559          
BLAST of EY713220 vs. ExPASy Swiss-Prot
Match: SENP7_MOUSE (Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.683e-19
Identity = 72/250 (28.80%), Postives = 110/250 (44.00%), Query Frame = 2
Query:   35 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKXXXXXXXXXXXXKLA-----DLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVIC------------------------------------HPGDVASFKVEDLKRSE----------KVPCILHMDSIKGTHAGLKKLVQS---YLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCG 619
            +VYP   +   + ++  D++ L+   F+ND IIDFY+KYL  +  ++E             K       +L +D   +S  +    RVR WTR ++IF KDYIF+PVN + HW L VIC                                    H     S   ED + +E          K PCIL +DS+K   A ++  VQ+   YL  EW+ + K   E   +  ++   +  ++P+Q+NS DCG
Sbjct:  736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDCPQTVSQQFQGQQSQHDHKMTDNDPHTTSTVSTSAEDSQSTEVNMSVPKKMCKRPCILILDSLKA--ASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVD---LCPKVPKQDNSSDCG 980          
BLAST of EY713220 vs. ExPASy Swiss-Prot
Match: SENP7_HUMAN (Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.980e-18
Identity = 71/250 (28.40%), Postives = 111/250 (44.40%), Query Frame = 2
Query:   35 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLKNQIQAEEKXXXXXXXXXXXXKLA-----DLDKDPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHP------------------------------------GDVASFKVEDLKRSE----------KVPCILHMDSIKGTHAGLKKLVQS---YLCEEWKERHKDTSEDVSSKFLNFRFIPLELPQQENSFDCG 619
            +VYP   +   + ++  D++ L+   F+ND IIDFY+KYL  +  ++E             K       +L +D  ++S  +    RVR WTR ++IF KDYIF+PVN + HW L VIC P                                        S   ED + +E          K PCIL +DS+K   A ++  VQ+   YL  EW+ + K   +   +  ++   +  ++P+Q+NS DCG
Sbjct:  683 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFFYKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKA--ASVQNTVQNLREYLEVEWEVKLKTHRQFSKTNMVD---LCPKVPKQDNSSDCG 927          
BLAST of EY713220 vs. ExPASy Swiss-Prot
Match: SENP6_MOUSE (Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.558e-14
Identity = 43/121 (35.54%), Postives = 67/121 (55.37%), Query Frame = 2
Query:   35 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLK-NQIQAEEKXXXXXXXXXXXXKLADLDK---DPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPG 382
            +VYP   +   +S++  D+  L    F+ND IIDFY+KYL   +++ E+             +L   ++   D +++S  +    RV+ WTR VDIF KD+IF+P+N   HW L V+C PG
Sbjct:  675 IVYPPPPAKGGISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRERRNPDTTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVCFPG 795          
BLAST of EY713220 vs. ExPASy Swiss-Prot
Match: SENP6_HUMAN (Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 42/121 (34.71%), Postives = 67/121 (55.37%), Query Frame = 2
Query:   35 VVYPEGDSDA-VSISKRDIDLLQPDTFVNDTIIDFYIKYLK-NQIQAEEKXXXXXXXXXXXXKLADLDK---DPSSISDGKAAFLRVRKWTRKVDIFGKDYIFIPVNFNLHWSLIVICHPG 382
            +VYP   +   +S++  D+  L    F+ND IIDFY+KYL   +++ E+             +L   ++   + +++S  +    RV+ WTR VDIF KD+IF+P+N   HW L V+C PG
Sbjct:  655 IVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADRIHIFSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVCFPG 775          
The following BLAST results are available for this feature:
BLAST of EY713220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ULP2_SCHPO6.285e-2131.36Ubiquitin-like-specific protease 2 OS=Schizosaccha... [more]
SENP7_MOUSE7.683e-1928.80Sentrin-specific protease 7 OS=Mus musculus GN=Sen... [more]
SENP7_HUMAN4.980e-1828.40Sentrin-specific protease 7 OS=Homo sapiens GN=SEN... [more]
SENP6_MOUSE2.558e-1435.54Sentrin-specific protease 6 OS=Mus musculus GN=Sen... [more]
SENP6_HUMAN7.442e-1434.71Sentrin-specific protease 6 OS=Homo sapiens GN=SEN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-028-E03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY713220 ID=EY713220; Name=EY713220; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGATTTTGATGAGTCATTCGAAGATGTTGTCTATCCAGAAG
GGGATTCCGATGCTGTTTCTATTAGCAAGAGAGATATTGATCTGTTACAA
CCCGATACATTCGTCAATGACACAATCATTGACTTTTACATAAAATATTT
GAAGAATCAGATACAAGCTGAAGAAAAGCATAGATTTCATTTCTTTAACA
GTTTTTTCTTTCGGAAGCTTGCTGATTTAGACAAAGACCCATCCAGTATT
TCGGATGGCAAGGCTGCTTTTCTTCGTGTTCGCAAGTGGACGAGGAAGGT
GGATATATTTGGAAAAGATTATATTTTCATTCCCGTAAACTTCAATCTTC
ACTGGAGTTTGATAGTCATATGTCATCCTGGTGATGTGGCTTCATTTAAA
GTTGAAGACTTGAAAAGGTCGGAGAAGGTGCCGTGTATACTGCATATGGA
TTCTATCAAAGGAACACATGCAGGTCTCAAAAAACTTGTTCAAAGTTACC
TTTGTGAAGAATGGAAAGAGAGACACAAGGACACATCGGAAGATGTTTCT
TCAAAATTCTTGAACTTCCGGTTTATCCCACTTGAGCTTCCACAGCAGGA
AAATTCATTTGATTGCGGCCTGTTCTTGCTCCACTATCTGGAGCTCTTTC
TGGCTGAAGCTCCTGTTAGTTTCAGCCCATTTAAGTTAAAGAAGTTATCT
AGCTTCCTTAATGTGGATTGGTTTCCCCCTGGCGAGGTTTTCTTAAAAGT
TCTTTAATCCAAAAGGTATTTCCGGACCCCTTCAAAATCGATCCGCGGTT
TGCCTTGAAAAAACTAACTTCTAAAATTCTGGAAAAAATGGGGAATGAAG
GGGGTTTAAATTTCTAAAAAAAAATGCAGGGTGCGGCACTCTGCACTGGA
ATTTATAAATCCCCGG
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