EY712760

Overview
NameEY712760
Unique NameEY712760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY712760 vs. ExPASy Swiss-Prot
Match: EBF1_ARATH (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.118e-25
Identity = 55/90 (61.11%), Postives = 73/90 (81.11%), Query Frame = 3 
Query:   12 VADNCPLLCDLDVSKCAVTDFGIASLAHGNYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVLS 281
            +A NC +L DLD+SKCA++D GI +LA  + L LQILS++GCSMV+DKSL A+  LG TLLGLNLQ C +IS ++VD LVE+L++CD+LS
Sbjct:  539 IAANCQILSDLDISKCAISDSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFLVERLYKCDILS 628
[Close]
BLAST of EY712760 vs. ExPASy Swiss-Prot
Match: EBF2_ARATH (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana GN=EBF2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.504e-22
Identity = 50/90 (55.56%), Postives = 68/90 (75.56%), Query Frame = 3 
Query:   12 VADNCPLLCDLDVSKCAVTDFGIASLAHG-NYLNLQILSLSGCSMVSDKSLGALRKLGQTLLGLNLQHCNAISTNSVDMLVEQLWRCDVL 278
            VA NC  + DLD+S   V+D GI +LA   N+LNLQ+LS+ GCS ++DKS   ++KLG+TLLGLN+Q C  IS+++VD L+E LWRCD+L
Sbjct:  533 VAKNCYSVNDLDISNTLVSDHGIKALASSPNHLNLQVLSIGGCSSITDKSKACIQKLGRTLLGLNIQRCGRISSSTVDTLLENLWRCDIL 622
The following BLAST results are available for this feature:
BLAST of EY712760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
EBF1_ARATH3.118e-2561.11EIN3-binding F-box protein 1 OS=Arabidopsis thalia... [more]
EBF2_ARATH5.504e-2255.56EIN3-binding F-box protein 2 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-023-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY712760 ID=EY712760; Name=EY712760; organism=Citrus sinensis; type=EST; length=899bp
CGGACGCGTGGGTTGCAGACAACTGCCCTTTGCTGTGTGATCTCGATGTC
TCTAAGTGTGCTGTCACTGATTTTGGTATTGCATCCCTAGCTCATGGAAA
CTATCTCAATCTGCAGATTCTTTCGCTGTCAGGTTGCTCAATGGTTTCAG
ACAAGAGCTTGGGTGCCCTAAGAAAGTTGGGTCAGACCCTTCTGGGTTTG
AACCTCCAGCACTGCAATGCAATCAGCACCAACTCTGTTGACATGCTTGT
GGAGCAGTTATGGAGGTGTGATGTCCTCTCATAAGCTGCAAAGCATTCGA
CAAAACCCCATTCGATAATATGTAGCACTGATACAAAGGATGGGGATGAA
CATATCAGGAAGTCTCAGAATTTTCTAGTCAGCATCTGTGAGTAGCAGCA
GCAGTTTGTTTAGTTTTTGGGTCCATCTGCTATGGGTCTTCAGTCTTCAA
GTGCTCGGTTTCTTTTTCCAGGGTGAATATGGCCTCTACCTTTTTTGCAG
GTTTCCGAATGAAAGAAAATCTGTTACAGCTTTTTGATGCCCAATTACGG
GTGTCACTTTAAGGCCATATTTTCCTGAGAATACAGCTACTGGGTTATGT
TTCTAGGGTATTCCCTCCGCTGTTAATGGTTTTGTGCTACTGGGTGTCCG
TACCTAGTGTTTTAGCTATAGTCTATGGTGAGACTAAGCTTTTGTCTTTG
CAAATTTCGAGTCTGTTTACCAAGTGTCCCACGTTTTGATGCACATGNNT
GGTCTATGTTTTTCTCAAAGGGTGGATTAAAAGTCATGAGAGTCCCTTTG
TTGTCGTTGCTTTTTACGGNTCAGAATTTTTGATGCCTTGTGTCGACGGG
GTCTTGGCCTTGGCAGCAAGTATATGGTCTGCCTTGACNACCCGAGGGT
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