EY688816

Overview
NameEY688816
Unique NameEY688816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.113e-71
Identity = 127/170 (74.71%), Postives = 149/170 (87.65%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  E+Q+++LE+LYP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGT+PI ASTGGLVDTV EGFTGF MG+F+V+C  VDP DV  ++TTV RALA YG+ A  EM++N MAQDLSWKGPAK WE+ LL+L V+GSEPG+DGE IAPLAKENVATP
Sbjct:  439 KKFEQQIQELEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVDTVTEGFTGFHMGAFNVECATVDPADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDGEEIAPLAKENVATP 608
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.231e-70
Identity = 128/170 (75.29%), Postives = 146/170 (85.88%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  EKQ+E LE+LYP+KARGVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV+EG+TGFQMG+  V+C+ +D  DVAA+  TV RAL TY T AL EM+ N MAQDLSWKGPA+ WE+ LL+LEV GSEPG +GE IAPLAKENV TP
Sbjct:  439 KKFEKQIEHLEVLYPDKARGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGYTGFQMGALHVECDKIDSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGTEGEEIAPLAKENVPTP 608
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.607e-70
Identity = 129/170 (75.88%), Postives = 147/170 (86.47%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  E+Q+EQLE++YP+KARGVAKFN+PLAHMI AGADF+LIPSRFEPCGLIQLHAMRYGT  I ASTGGLVDTV+EG+TGF MG+F+VDCE VDP DV  V TTV RALA YGT A  EM+KN M+Q+LSWKGPAK WE  LL+L VAGSEPG++G+ IAPLAKENVATP
Sbjct:  439 KKFEQQIEQLEVMYPDKARGVAKFNVPLAHMITAGADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVDTVKEGYTGFHMGAFNVDCETVDPEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVEGDEIAPLAKENVATP 608
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.581e-70
Identity = 125/170 (73.53%), Postives = 147/170 (86.47%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  E+++EQLE+LYP KA+GVAKFN+PLAHMI AGADF+L+PSRFEPCGLIQLHAMRYGTVPI ASTGGLVDTV+EG+TGF MG+F+V+C+ VDP DV  + TTV RALA YGT A AEM+KN M+++LSWK PAKKWE  LL L  +GSEPG++GE IAPLAKENVATP
Sbjct:  438 KEFEQEIEQLEVLYPNKAKGVAKFNVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVDTVKEGYTGFHMGAFNVECDVVDPADVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGEEIAPLAKENVATP 607
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.916e-65
Identity = 121/170 (71.18%), Postives = 140/170 (82.35%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K ME Q+ +LE  +P KA GVAKFN+PLAHMI AGADFI++PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV++G+TGF +G F+V CE VDP DV A +  V RA+A YGT A+ EM+KN M QD SWKGPA+ WE+ LL+L VAGSE G +GE IAPLAKENVATP
Sbjct:  441 KKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGEEIAPLAKENVATP 610
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.116e-63
Identity = 119/170 (70.00%), Postives = 137/170 (80.59%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K ME++L  LE+ YP+ ARG+AKFN+PLAHM+ AGADFI+IPSRFEPCGLIQL  M YG VPI +STGGLVDTV EG TGF MGSF+V+ E VDP DVAAV + V RAL  Y T     M++N MAQDLSWKGPAKKWEE LL+L V GS+PGI+GE IAPLAK+NVATP
Sbjct:  396 KKMEEELMLLEVKYPQNARGIAKFNVPLAHMMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQNVATP 565
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.903e-63
Identity = 120/170 (70.59%), Postives = 139/170 (81.76%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K MEKQ+E LE  YP KA G+ KFN PLAH IIAGADFI+IPSRFEPCGL+QLHAM YGTVPIV+STGGLVDTV+EG+TGF  G F V+CE VDP DV  ++ TV+RAL TYGTQA+ +++ N MAQ+ SWK PAK WE+ LLNLEV G+  GIDG+ IAPLAKENVATP
Sbjct:  434 KIMEKQIEVLEEKYPGKAIGITKFNSPLAHKIIAGADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVDTVKEGYTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKLWEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.662e-57
Identity = 111/170 (65.29%), Postives = 127/170 (74.71%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SVDC+ V+P DV  V+TT++RA+   GT A  EM++N M QDLSWKGPAK WE  LL L VAGSEPG++GE IAPLAKENVA P
Sbjct:  437 KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSEPGVEGEEIAPLAKENVAAP 606
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSJ (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=WAXY PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.020e-56
Identity = 109/170 (64.12%), Postives = 125/170 (73.53%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SVDC+ V+P DV  V+ T++RA+   GT A  EM++N M QDLSWKGPAK WE  LL L VAGS PGI+G+ IAPLAKENVA P
Sbjct:  440 KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
[Close]
BLAST of EY688816 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=WAXY PE=3 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.020e-56
Identity = 109/170 (64.12%), Postives = 125/170 (73.53%), Query Frame = 3 
Query:   27 KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGE*IAPLAKENVATP 536
            K  EK L+ +E  YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL  MRYGT    ASTGGLVDTV EG TGF MG  SVDC+ V+P DV  V+ T++RA+   GT A  EM++N M QDLSWKGPAK WE  LL L VAGS PGI+G+ IAPLAKENVA P
Sbjct:  440 KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 609
The following BLAST results are available for this feature:
BLAST of EY688816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 357
Match NameE-valueIdentityDescription
SSG1_ANTMA1.113e-7174.71Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_MANES1.231e-7075.29Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_IPOBA1.607e-7075.88Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_SOLTU3.581e-7073.53Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ARATH5.916e-6571.18Probable granule-bound starch synthase 1, chloropl... [more]
SSG1B_HORVU1.116e-6370.00Granule-bound starch synthase 1b, chloroplastic/am... [more]
SSG1_PEA1.903e-6370.59Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSA2.662e-5765.29Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSJ5.020e-5664.12Granule-bound starch synthase 1, chloroplastic/amy... [more]
SSG1_ORYSI5.020e-5664.12Granule-bound starch synthase 1, chloroplastic/amy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-065-A07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688816 ID=EY688816; Name=EY688816; organism=Citrus sinensis; type=EST; length=818bp
CAGATAATAGTCCTTGGTACCGGTATAAACCAATGGAGAAGCAGCTTGAA
CAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAA
TATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTC
CAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTAT
GGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGA
AGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGG
CTGTGGATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCT
CTTGCAACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCAT
GGCTCAAGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCC
TACTTAACCTGGAAGTTGCTGGTAGTGAACCTGGAATTGACGGCGAATAA
ATTGCTCCTCTTGCCAAGGAAAATGTGGCCACTCCTTGATCGAGGCTACA
AAAATCTCCACTTTTATTTTGGACCCCCAACATGTTCCTGTAATTCTCCA
CAACCCGAGATATTACTTAGGAAATAACCTAGGGTGGCAGTATATGCAGC
CTGGGGCTAATTTTCCATAATGGTTGGGAGGTGAAACATTTATGGTTTAC
CTTGGAATATGAAATATTAAGATTCGGGTTTAAGGTTTTTGGAAAAGGGG
TCTGGGGGGTGGACCCCCTTCTCCTGGAATGGAGACGGCTCACTTGAACC
CGTTTCTGCGCGGCGGGC
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