EY746534

Overview
NameEY746534
Unique NameEY746534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1123
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY746534 vs. ExPASy Swiss-Prot
Match: TYPA_SYNY3 (GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain PCC 6803) GN=typA PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 7.043e-11
Identity = 28/45 (62.22%), Postives = 38/45 (84.44%), Query Frame = 3 
Query:  189 QGKYVTSRNLLDRLYRELERNLTMKVEDGETADTFIVSGRGTLHI 323
            +GK+VTSR + DRL RELE N+ ++VEDGE+A+ F+VSGRG LH+
Sbjct:  322 EGKFVTSRQIRDRLNRELETNVALRVEDGESAEQFLVSGRGELHL 366

HSP 2 Score: 24.2534 bits (51), Expect = 7.043e-11
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 1 
Query:  328 ILNKNMHREGNDFMEGPPRVINKE 399
            IL + M REG +F    P+VI +E
Sbjct:  368 ILIETMRREGYEFQVAQPQVIYRE 391
The following BLAST results are available for this feature:
BLAST of EY746534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TYPA_SYNY37.043e-1162.22GTP-binding protein TypA/BipA homolog OS=Synechocy... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-032-H04-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY746534 ID=EY746534; Name=EY746534; organism=Citrus sinensis; type=EST; length=1123bp
CCCCGCGTCCGGTAATTTTGGGATGAGTACTGCTTGTTGTTCACATTTGT
AATTTTTTTCTGGACATGCAAAATAGAAGAAATAAAATCCAATGCTTTTT
CGGGGCATTTTACTTTAGTTGCATGCCCATGCACTTACAGAGGGTCTTCT
CACGTTGCTATTGCCTTAATGATTATTGTGTTTGTTTTCAGGGAAAATAC
GTTACTAGCAGAAACTTACTAGATCGACTTTACCGTGAACTTGAGCGAAA
TTTGACTATGAAAGTTGAAGACGGAGAAACCGCAGATACATTTATCGTTA
GTGGGCGTGGTACTTTGCATATCACTAATCCTGAATAAAAACATGCATAG
AGAAGGAAATGATTTTATGGAGGGACCCCCAAGAGTTATTAACAAAGAAA
GTGAATGAAGACTTGCTGGAAGCATATGATAACCGCCGCTGTGAGAGGTA
CCAAAACAATATATACAGACAAGATCCTCACACTACTAGTACACAGAAGT
CGACCCCATACGAAGAACTGCCGAGTATCGCAGNACCCAAACGAAGAACT
ACTATTAACATAATAAATGACGACGCCAACTTGGCCCATCTAAAACCAAC
AACAACAACAAATGCAGCGAGAGACGGGAACCACGAAACCCTGCCCCGCT
CCAGAAACTGCCGACGATGCACCACAGGCCCGGACCCGGCCGAAAAGCAC
ACCAGAAGCGGCACACTGTGCCCACGCCAGCCAGAGCCACACACACAATG
CCAACGCACCTAATCGACCAAGAAGACAAGAACCGACGCTCACGCAACGA
AGCAGCGACAAAGCTAAGACACACCAAAGCCGCCCATCAGACCAGAGAAA
CACAGCACCAACAAGCAACACCGCCCCAAGATCCCTGACACCGTACACAC
CGAAACGAAACCACAACACCAGCCGTTCGACACACGGCCCGACCACAAGA
AACAACACCCCCGCGAGCGCACAAACACACACACAAACGACACCCACGGA
CGCCGCAGCAAGTGGNACGCCTGAGACGAGATCGATAGCACGCCACTGCC
AAAACCCGACCCGATAATATCGGACGCACGTATNCAACACAACNCCCTGC
AATGCCTGCTGCCGGTGACCCCC
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