EY746526

Overview
NameEY746526
Unique NameEY746526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL222_ARATH (60S ribosomal protein L22-2 OS=Arabidopsis thaliana GN=RPL22B PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.237e-40
Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 1
Query:  106 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            +F IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT+TREK+KITVT+D  FS              HNVRDWLRVIA+NKDR++YELRYFNIAENEGEEED
Sbjct:   17 SFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEGEEED 124          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL223_ARATH (60S ribosomal protein L22-3 OS=Arabidopsis thaliana GN=RPL22C PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.118e-39
Identity = 79/108 (73.15%), Postives = 89/108 (82.41%), Query Frame = 1
Query:  106 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            +F IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV++TREK+KITVT+D  FS              HNVRDWLRVIA+NKDR++YELRYFNIAENE EEED
Sbjct:   17 SFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSITREKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEAEEED 124          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL221_ARATH (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana GN=RPL22A PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28
Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 1
Query:  106 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            +FVIDC KPV+D I++IA+LEKFLQERIKV GKAGALG+SV++TR   KI V ++SNFS              +N+RDWLRVIASNKD++VYE+RYF I +     E+
Sbjct:   19 SFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDEVASYEE 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_RAT (60S ribosomal protein L22 OS=Rattus norvegicus GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.759e-23
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   VT+ R K+KITVTS+  FS              +N+RDWLRV+A++K+   YELRYF I ++E EEED
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_PIG (60S ribosomal protein L22 OS=Sus scrofa GN=RPL22 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   VT+ R K+KITVTS+  FS              +N+RDWLRV+A++K+   YELRYF I ++E EEED
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_MOUSE (60S ribosomal protein L22 OS=Mus musculus GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   VT+ R K+KITVTS+  FS              +N+RDWLRV+A++K+   YELRYF I ++E EEED
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_MACFA (60S ribosomal protein L22 OS=Macaca fascicularis GN=RPL22 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   VT+ R K+KITVTS+  FS              +N+RDWLRV+A++K+   YELRYF I ++E EEED
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_HUMAN (60S ribosomal protein L22 OS=Homo sapiens GN=RPL22 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23
Identity = 59/108 (54.63%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   VT+ R K+KITVTS+  FS              +N+RDWLRV+A++K+   YELRYF I ++E EEED
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_ICTPU (60S ribosomal protein L22 OS=Ictalurus punctatus GN=rpl22 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 6.147e-23
Identity = 59/108 (54.63%), Postives = 72/108 (66.67%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   V++ R K+KITVTSD  FS              +N+RDWLRV+A+ K+   YELRYF I ++E EEED
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEEEED 126          
BLAST of EY746526 vs. ExPASy Swiss-Prot
Match: RL22_CHICK (60S ribosomal protein L22 OS=Gallus gallus GN=RPL22 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.369e-22
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  109 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 429
            F +DC  PVED IMD A+ E+FLQERIKV GKAG LG   VT+ R K+KITVTS+  FS              +N+RDWLRV+A++K+   YELRYF I ++E EEE+
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEEE 126          
The following BLAST results are available for this feature:
BLAST of EY746526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
RL222_ARATH4.237e-4075.0060S ribosomal protein L22-2 OS=Arabidopsis thalian... [more]
RL223_ARATH6.118e-3973.1560S ribosomal protein L22-3 OS=Arabidopsis thalian... [more]
RL221_ARATH4.859e-2857.41Putative 60S ribosomal protein L22-1 OS=Arabidopsi... [more]
RL22_RAT2.759e-2354.6360S ribosomal protein L22 OS=Rattus norvegicus GN=... [more]
RL22_PIG4.706e-2354.6360S ribosomal protein L22 OS=Sus scrofa GN=RPL22 P... [more]
RL22_MOUSE4.706e-2354.6360S ribosomal protein L22 OS=Mus musculus GN=Rpl22... [more]
RL22_MACFA4.706e-2354.6360S ribosomal protein L22 OS=Macaca fascicularis G... [more]
RL22_HUMAN4.706e-2354.6360S ribosomal protein L22 OS=Homo sapiens GN=RPL22... [more]
RL22_ICTPU6.147e-2354.6360S ribosomal protein L22 OS=Ictalurus punctatus G... [more]
RL22_CHICK1.369e-2253.7060S ribosomal protein L22 OS=Gallus gallus GN=RPL2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C5-003-032-G06-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY746526 ID=EY746526; Name=EY746526; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGGTAAATTGTACAATTCGTAGTGCGGCGGAGCAGAGACGG
GAAAATGAGTCGCGGAGCAGCAGCAGCAGGGGTGAAGGGGAAGAAAAAGG
GAGCGACCTTCGTGATAGACTGCGGGAAGCCTGTGGAGGACAAAATCATG
GACATTGCGTCCTTGGAAAAGTTCCTCCAGGAGCGGATCAAGGTCGGCGG
CAAGGCTGGTGCCCTTGGGGATTCAGTTACCGTCACCCGTGAGAAGACCA
AGATCACCGTCACTTCTGACAGCAACTTCTCTAAGAGGTATCTTAAATAT
TTGACCAAGAAGTACTTGAAGAAACACAATGTAAGAGATTGGCTCCGAGT
AATTGCTTCAAACAAGGACCGAAGTGTCTATGAGCTGCGATACTTCAACA
TTGCTGAGAATGAGGGAGAGGAGGAAGACTGAACATCCATTTCAGTATTT
CCTCATATTATATCTATTCTGATTAACTTGTTCTAGCTCTTTTTTCTTTT
TTTCTCCTGCGATCAGATCTGGTGGACTTGTTTGATTTGTTTATGAAAAC
ATTCTTACCTTATGGTCGGTGGCAATTGGGCTCACTTCTAAGACATATGC
TTAATTTTCTTTGCCGCCGCATAAACGGGCCCTGCGCCCCACCGCCAGAG
CTCCGCGCGCTCGGCCCGCAGCACAAAGCTCCGCACACCACCAACCGTCA
CCCGCAGCTACAATCCACACCGCGGGCCCACCCAACCGCCCAGCCGAACA
GAAGGCGGCCCCGCCCCCCCGCAACAAAGCAGAGGCGCCGGCCGCCCCAA
GACCTGCAGCCAGCCATACGCTTTGTAACCACGCGAAGCCCCGGACAAAC
AAGACCGACGCCCCCGGA
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