EY711706

Overview
NameEY711706
Unique NameEY711706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.328e-57
Identity = 109/140 (77.86%), Postives = 128/140 (91.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERSLHDALCV+R LV K+FLIAGGGAPEIE+S+Q+ A++K L+G+  YCVR++AEALE+IPYTLAENAGL+P++IVTELRN+HAQGEINSGINVRKG ITNIL+ENVVQPLLVSTSA+TLA E V M+LKIDDI T R
Sbjct:  394 EAERSLHDALCVIRSLVKKKFLIAGGGAPEIEVSQQVTAFSKTLTGITSYCVRAYAEALEIIPYTLAENAGLHPISIVTELRNKHAQGEINSGINVRKGAITNILQENVVQPLLVSTSALTLATETVVMLLKIDDIATAR 533          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 1.905e-53
Identity = 104/140 (74.29%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERS+HDALCV+RCLV KR LIAGGGAPEIEL+ +L  +++ LSGME YC+R+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE  +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V  R
Sbjct:  403 EAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVVNTR 542          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3)

HSP 1 Score: 208.379 bits (529), Expect = 2.489e-53
Identity = 105/140 (75.00%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERS+HDALCV+RCLV KR LIAGGGAPEIEL+ +L  +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE  +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V  R
Sbjct:  400 EAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3)

HSP 1 Score: 208.379 bits (529), Expect = 2.489e-53
Identity = 105/140 (75.00%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERS+HDALCV+RCLV KR LIAGGGAPEIEL+ +L  +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE  +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V  R
Sbjct:  400 EAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 3.250e-53
Identity = 105/140 (75.00%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERS+HDALCV+RCLV KR LIAGGGAPEIEL+ +L  +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE  +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V  R
Sbjct:  400 EAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4)

HSP 1 Score: 207.994 bits (528), Expect = 3.250e-53
Identity = 105/140 (75.00%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERS+HDALCV+RCLV KR LIAGGGAPEIEL+ +L  +++ LSGME YCVR+FA+A+EVIP TLAENAGLNP++ VTELRNRHAQGE  +GINVRKG I+NILEE VVQPLLVS SA+TLA E VR ILKIDD+V  R
Sbjct:  400 EAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.245e-53
Identity = 107/137 (78.10%), Postives = 119/137 (86.86%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 411
            EAERSLHDALCVVRCLV KR  IAGGGAPEIE++ QL A A+ L G++ YC R+FA ALEVIP TLAENAGLNP+A VTELRNRHAQGE N+GINVRKG IT+IL ENVVQPLLVSTS+ITLA+E VR ILKIDDI+
Sbjct:  393 EAERSLHDALCVVRCLVKKRAQIAGGGAPEIEMAIQLAAHAQTLEGVDAYCFRAFANALEVIPSTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGAITDILAENVVQPLLVSTSSITLASETVRSILKIDDII 529          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.783e-51
Identity = 101/140 (72.14%), Postives = 120/140 (85.71%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERS+HDALCV+RCLV KR LIAGGGAPEIEL+ +L  +++ L GME YCVR++++ALEVIP TLAENAGLNP++ VTELRNRHAQG+  +GINVRKG I+NI+EE VVQPLLVS SA+TLA E VR ILKIDD+V  R
Sbjct:  397 EAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDKMAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVNAR 536          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 9.159e-48
Identity = 95/140 (67.86%), Postives = 115/140 (82.14%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            EAERSLHDALCV+RCLV +R LIAGGG+PEIE +++L   A+ L G E  C+R+F+EALE+IP TLAENAGLN + +VTELR+RHA GE  +GINVRKG +TNILEENV+QPLLV+ SAI LAAE  +MI+KIDDI   R
Sbjct:  388 EAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDITLAR 527          
BLAST of EY711706 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.255e-45
Identity = 88/140 (62.86%), Postives = 114/140 (81.43%), Query Frame = 1
Query:    1 EAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 420
            E ERSLHDALCV+RCLV +R LIAGGGAPEIE+SR+L   ++++ G+E Y  + FA+ALEVIP TLAENAGLN + ++TELR+RH  G++N GI+VR+   TN  EE+++QP+LVSTSAITLA+ECV+ IL+IDDI   R
Sbjct:  390 ETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRHENGDVNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDITFSR 529          
The following BLAST results are available for this feature:
BLAST of EY711706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
TCPD_DICDI6.328e-5777.86T-complex protein 1 subunit delta OS=Dictyostelium... [more]
TCPD_BOVIN1.905e-5374.29T-complex protein 1 subunit delta OS=Bos taurus GN... [more]
TCPD_RAT2.489e-5375.00T-complex protein 1 subunit delta OS=Rattus norveg... [more]
TCPD_MOUSE2.489e-5375.00T-complex protein 1 subunit delta OS=Mus musculus ... [more]
TCPD_PONAB3.250e-5375.00T-complex protein 1 subunit delta OS=Pongo abelii ... [more]
TCPD_HUMAN3.250e-5375.00T-complex protein 1 subunit delta OS=Homo sapiens ... [more]
TCPD_AEDTR4.245e-5378.10T-complex protein 1 subunit delta OS=Aedes triseri... [more]
TCPD_TAKRU1.783e-5172.14T-complex protein 1 subunit delta OS=Takifugu rubr... [more]
TCPD_SCHPO9.159e-4867.86T-complex protein 1 subunit delta OS=Schizosacchar... [more]
TCPD_CANGA4.255e-4562.86T-complex protein 1 subunit delta OS=Candida glabr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-010-G12-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711706 ID=EY711706; Name=EY711706; organism=Citrus sinensis; type=EST; length=628bp
GAGGCTGAAAGGAGCTTGCACGATGCCTTGTGTGTGGTTAGGTGTTTGGT
GAGCAAGCGGTTTTTGATTGCAGGTGGTGGGGCACCGGAGATCGAGTTGT
CAAGGCAGTTGGGAGCATGGGCAAAGGCATTGTCCGGCATGGAAAGGTAT
TGTGTGAGGTCATTTGCAGAGGCACTTGAGGTTATTCCCTATACTTTGGC
TGAGAATGCTGGGTTGAACCCGCTTGCCATTGTGACTGAACTGAGGAACA
GGCATGCACAAGGGGAAATCAATTCTGGAATCAATGTGAGGAAGGGGCAG
ATTACCAATATTTTGGAGGAGAATGTGGTGCAGCCACTGCTTGTGAGCAC
AAGTGCAATAACACTGGCTGCAGAGTGTGTAAGGATGATTTTGAAGATTG
ATGACATCGTTACTGTGAGGTAGTTTTGCATCCAAAGATGAAAGTGTGTT
CCCTACTTATGTTTTGCGTCCTTGTATTATCTGAATTAGTAAGCTCTGTT
TTAGGATTGATTGCTGTTAAGAGTTTTGACTTTGTTATTTTTGTTGCCAA
ATATTTGGTTTGAATTTGCTGTTTTATGGTTAATTAGCAGTCGAATGACT
GATTAACTACTAAAAAAAAAAAAAAAAA
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