EY711703

Overview
NameEY711703
Unique NameEY711703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711703 vs. ExPASy Swiss-Prot
Match: AKRP_ARATH (Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 5.666e-95
Identity = 165/262 (62.98%), Postives = 205/262 (78.24%), Query Frame = 1
Query:   13 NLVSRKWRQVQEELNLTKKEKRQIALQIEFGSRVEKKKQGYLPLNTLDLKEYLAYKEAKLSQNPPLVLDKPSTFPTDAKESEEDRDCGFQDYVNASSSTCTQRVPPKNPKWAVYGRGLDDVSEFFNSGNYDPPDKKSDGPRRKLFTKEEKVLLNKKLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEDGATLLHYAVQTASSPAIKILFVYNGDINLQ 798
            NLV  +WR +Q E+NLTKK+KR+IA ++EFG RVEKK+QG +PL  +DL ++L YKEAKL+Q  P++LDKP  F  D+  S +            + S+ ++RV PKNP+WAVYG+G D V++FFNS  YDP DKKSDGPR KL +KEEK +LN + P LA ATSKKWLPLH+LAA GEFY VD+LLKHN+DINA D  GLT LH+AIIGKKQA+TNYLLRESANPFV+D++GATL+HYAVQTAS+P IK+L +YN DIN Q
Sbjct:  104 NLVPEEWRDIQAEVNLTKKDKRKIAQEMEFGVRVEKKRQGLIPLRKVDLNDFLTYKEAKLAQLRPVILDKPGNFSDDSGASSDGE---------TAVSSPSERVAPKNPRWAVYGKGFDHVAKFFNSDKYDPSDKKSDGPR-KLLSKEEKFMLNSRNPDLAVATSKKWLPLHTLAACGEFYLVDSLLKHNLDINATDVGGLTVLHRAIIGKKQAITNYLLRESANPFVLDDEGATLMHYAVQTASAPTIKLLLLYNADINAQ 355          

HSP 2 Score: 31.5722 bits (70), Expect = 5.666e-95
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  818 LHLAXSARRTDIVKLXTDKGAD 883
            LH+A  ARR+DIVKL   KGAD
Sbjct:  363 LHVAVQARRSDIVKLLLIKGAD 384          
BLAST of EY711703 vs. ExPASy Swiss-Prot
Match: EM506_ARATH (Ankyrin repeat domain-containing protein EMB506, chloroplastic OS=Arabidopsis thaliana GN=EMB506 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.522e-27
Identity = 57/120 (47.50%), Postives = 84/120 (70.00%), Query Frame = 1
Query:  439 KLFTKEEKVLLNK-KLPHLATATSKKWLPLHSLAASGEFYFVDALLKHNVDINAVDKDGLTALHKAIIGKKQAVTNYLLRESANPFVVDEDGATLLHYAVQTASSPAIKILFVYNGDINL 795
            +L   EE+V+L + + P+L   ++K W PL +LA S +   +D L+++ +DI+ VDKD  TALHKAIIGKK+AV ++LLR+ ANP + D DGA  +HYAVQ  +   +K+LF YN D+N+
Sbjct:  127 QLLEPEERVILQQNEKPNLKMISTKSWKPLQTLALSMQIQLMDNLIENGLDIDDVDKDNQTALHKAIIGKKEAVISHLLRKGANPHLQDRDGAAPIHYAVQVGALQTVKLLFKYNVDVNV 246          

HSP 2 Score: 27.335 bits (59), Expect = 6.522e-27
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  818 LHLAXSARRTDIVKLXTDKGADKL*KT 898
            LH+A  +R  DI K+    GADK  +T
Sbjct:  255 LHIAVQSRNRDITKILLTNGADKTRRT 281          
The following BLAST results are available for this feature:
BLAST of EY711703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AKRP_ARATH5.666e-9562.98Ankyrin repeat domain-containing protein, chloropl... [more]
EM506_ARATH6.522e-2747.50Ankyrin repeat domain-containing protein EMB506, c... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-010-G09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711703 ID=EY711703; Name=EY711703; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGGAACTTGGTGTCTCGAAAGTGGAGACAAGTTCAGGAGGA
ACTCAACTTGACGAAGAAAGAGAAGCGGCAGATTGCGCTTCAAATTGAGT
TCGGTAGCCGAGTTGAGAAAAAGAAACAAGGCTATCTTCCTTTGAACACT
TTGGATTTGAAGGAGTATTTGGCTTATAAAGAAGCTAAATTGTCTCAGAA
CCCCCCGCTTGTCCTTGATAAGCCTTCGACCTTCCCCACTGATGCCAAGG
AGTCTGAAGAAGATAGAGATTGTGGATTTCAAGATTATGTGAATGCGTCT
TCTTCTACTTGCACTCAACGAGTGCCGCCAAAGAATCCCAAATGGGCAGT
TTATGGCCGAGGTTTGGATGATGTTTCAGAGTTCTTCAATAGTGGGAATT
ATGACCCTCCTGATAAAAAATCTGATGGCCCTCGGCGTAAGTTGTTTACC
AAGGAGGAAAAGGTTCTGCTGAATAAAAAACTACCTCATTTGGCAACTGC
TACCTCTAAAAAATGGTTACCTCTGCATTCCCTTGCTGCATCAGGCGAGT
TCTATTTTGTTGATGCATTGTTGAAACATAATGTGGACATCAATGCTGTG
GACAAGGATGGTCTTACTGCACTTCACAAAGCAATAATTGGAAAGAAGCA
GGCTGTTACCAACTATCTTCTGAGAGAATCTGCAAATCCTTTTGTTGTTG
ATGAGGATGGGGCGACCTTATTGCATTATGCTGTCCAGACTGCATCAAGT
CCAGCAATTAAAATTCTTTTTGTATATAATGGTGATATAAACCTTCAGAT
AATGATGGATGGACACATTACATCTTGCTGNNTCAGCTCGTAGGACTGAC
ATAGTGAAACTGNNTACTGATAAAGGAGCTGATAAACTTTGAAAAACGGG
ATGGCTTGACTC
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