EY711656
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711656 vs. ExPASy Swiss-Prot
Match: MED31_ARATH (Mediator of RNA polymerase II transcription subunit 31 OS=Arabidopsis thaliana GN=At5g19910 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.599e-36 Identity = 78/122 (63.93%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 12 GYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRLKHILPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGPALSPMQYGIPPGSALMKND 377 GYLKYLQYWQRPEYIKFIMYPHCLYFLELLQN NFR AMAHPANKELAHRQQF++WKNYRNNRLKHILPR PALSPMQY + L KND Sbjct: 64 GYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWKNYRNNRLKHILPRPLPEPVPPQPPVAPSTSLPPAPSATAAL---SPALSPMQY----NNMLSKND 178
BLAST of EY711656 vs. ExPASy Swiss-Prot
Match: MED31_DICDI (Putative mediator of RNA polymerase II transcription subunit 31 OS=Dictyostelium discoideum GN=med31 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 3 Query: 15 YLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRL 203 YL YLQYW++PEY KFI+YP LYFL+LLQ FR + H + + H QQF+ W+ YRNNR+ Sbjct: 89 YLVYLQYWKKPEYAKFIVYPQSLYFLDLLQEERFRQELNHSQSTDFIHEQQFYHWQYYRNNRM 151
BLAST of EY711656 vs. ExPASy Swiss-Prot
Match: MED31_DANRE (Mediator of RNA polymerase II transcription subunit 31 OS=Danio rerio GN=med31 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.363e-11 Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 3 Query: 15 YLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRLK 206 YLKYL YW+ PEY KF+ YPHCL+ LELLQ +FR + + + QQ W++Y R + Sbjct: 48 YLKYLLYWKEPEYAKFLKYPHCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRTR 111
BLAST of EY711656 vs. ExPASy Swiss-Prot
Match: MED31_DROME (Mediator of RNA polymerase II transcription subunit 31 OS=Drosophila melanogaster GN=MED31 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.780e-11 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 3 Query: 15 YLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRLKHI 212 YLKYLQYW+ P+Y K++MYP CLYFL+LLQ +FR + + + Q W++Y R+K I Sbjct: 55 YLKYLQYWKEPDYAKYLMYPMCLYFLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIKLI 120
BLAST of EY711656 vs. ExPASy Swiss-Prot
Match: MED31_TAESO (Mediator of RNA polymerase II transcription subunit 31 OS=Taenia solium GN=Ts24233 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 15 YLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPANKELAHRQQFFFWKNYRNNRLKHI 212 YL YLQYW+ P Y +FI YP CL+ L+LLQ+ +FR +AH + Q WKNY R + + Sbjct: 64 YLSYLQYWKSPSYSRFITYPFCLHMLDLLQSPDFRREVAHESVTRFIDDQMLLHWKNYLRKRAEMV 129 The following BLAST results are available for this feature:
BLAST of EY711656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711656 ID=EY711656; Name=EY711656; organism=Citrus sinensis; type=EST; length=849bpback to top |