EY711655

Overview
NameEY711655
Unique NameEY711655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711655 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.785e-96
Identity = 176/264 (66.67%), Postives = 206/264 (78.03%), Query Frame = 1
Query:   19 LSDPNSNRNPIQSHLSFAFTHHYPMGFPANGSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPSHFITKITRYEKVVNIPKLMTXLDELLPISHEMAKRTSXEIETY-EPXVCEPHEILEIYRS 807
            LSD +S +  + S+    FT    +  P NG       LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KPTHVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+  L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NP +FITKI+RY KVV+IP  MT LDELLPIS EMAKR    I  +  P V   +EILE+Y++
Sbjct:  349 LSDGSSEKKDVSSNTVQTFT----VVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKN 608          
BLAST of EY711655 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 7.499e-95
Identity = 168/234 (71.79%), Postives = 193/234 (82.48%), Query Frame = 1
Query:  109 GSDAGSKPLKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPSHFITKITRYEKVVNIPKLMTXLDELLPISHEMAKRTSXEIETY-EPXVCEPHEILEIYRS 807
            G     + LKFLIYG+TGW+GGLLGKLC+ Q I + YG GRLE+RASL ADI ++KP+HVFNAAG+TGRPNVDWCESHK ETIR NV GTLTLADVCR+  L+++N+ATGCIFEYD+ HP GSGIGFKEED PNF GSFYSKTKAMVEELL+ F+NVCTLRVRMPISSDL+NP +FITKI+RY KVVNIP  MT LDELLPIS EMAKR    I  +  P V   +EILE+Y+S
Sbjct:  372 GCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKS 605          
BLAST of EY711655 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.279e-94
Identity = 175/245 (71.43%), Postives = 197/245 (80.41%), Query Frame = 1
Query:   76 THHYPMGFPANGSDAGSKP-LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFENVCTLRVRMPISSDLSNPSHFITKITRYEKVVNIPKLMTXLDELLPISHEMAKRTSXEIETY-EPXVCEPHEILEIYR 804
            TH       +NG+    KP LKFLIYG+TGWIGGLLGK+C  Q I + YG GRLE+R+SL  DI +VKPTHVFN+AGVTGRPNVDWCESHK ETIR NV GTLTLADVCR+ GL+++N+ATGCIFEYD  HP GSGIGFKEEDTPNF GSFYSKTKAMVEELLK ++NVCTLRVRMPISSDL+NP +FITKI+RY KVVNIP  MT LDELLPIS EMAKR    I  +  P V   +EILE+YR
Sbjct:  367 THMVVPSQRSNGTP--QKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYR 609          
BLAST of EY711655 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.259e-33
Identity = 85/243 (34.98%), Postives = 133/243 (54.73%), Query Frame = 1
Query:  133 LKFLIYGRTGWIGGLLGKLCQAQSIDFTYGSGRLENRASLEADIAAVKPTHVFNAAGVT---GRPNVDWCE--SHKVETIRTNVVGTLTLADVCRDKGLILINYATGCIFEYDSGHPLGSGIGFKEEDTPNFVGSFYSKTKAMVEELLKNFEN-VCTLRVRMPISSDLSNPSHFITKITRYEKVVNIPKLMTXLDELLPISHEMAK-RTSXEIETYEPXVCEPHEILEIYRST-RPHLHLENL 837
            +K+LI+G  GWIG ++ K+ + Q         R ++ +++E +I+ +KP  V +  G T   G   +D+ E     VE ++ N+ G L LA +C+   + L    TGCIFE  +        GF E D PNF GS YS  K   + L+  F+N V  LR+RMPI+ +  NP  FITKI  Y ++ +IP  MT LD+++P+  +MA+ +T+       P +   +EIL + R   +P+L  EN+
Sbjct:    1 MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTHGPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADEK-GFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILSYSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTWENM 241          
The following BLAST results are available for this feature:
BLAST of EY711655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
RHM2_ARATH1.785e-9666.67Probable rhamnose biosynthetic enzyme 2 OS=Arabido... [more]
RHM3_ARATH7.499e-9571.79Probable rhamnose biosynthetic enzyme 3 OS=Arabido... [more]
RHM1_ARATH1.279e-9471.43Probable rhamnose biosynthetic enzyme 1 OS=Arabido... [more]
YL780_MIMIV1.259e-3334.98Uncharacterized protein L780 OS=Acanthamoeba polyp... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-010-C05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711655 ID=EY711655; Name=EY711655; organism=Citrus sinensis; type=EST; length=845bp
CCACGCGTCCGCGAAATTCTATCAGATCCAAATTCAAATCGAAATCCGAT
CCAGTCTCATCTCTCCTTTGCATTCACTCACCATTACCCAATGGGTTTCC
CAGCCAACGGCTCCGACGCCGGCTCCAAGCCGCTCAAGTTTCTCATCTAC
GGCCGCACTGGCTGGATCGGGGGCTTGCTCGGCAAGCTCTGCCAAGCTCA
GTCCATTGACTTCACCTACGGCTCCGGCCGCCTCGAGAACCGCGCCTCCC
TCGAAGCCGACATCGCCGCCGTCAAGCCCACCCACGTCTTCAACGCGGCC
GGGGTGACCGGTAGGCCCAACGTCGACTGGTGCGAATCGCATAAGGTCGA
GACCATACGGACTAATGTCGTCGGCACCCTTACGCTTGCTGACGTCTGCA
GAGACAAAGGTTTGATTCTCATTAATTACGCCACCGGCTGCATCTTCGAG
TACGATTCCGGTCACCCCCTCGGATCCGGCATCGGCTTCAAGGAGGAGGA
TACTCCGAATTTTGTCGGATCTTTCTACTCCAAGACTAAGGCCATGGTGG
AAGAGTTGCTCAAGAATTTTGAGAATGTCTGTACTTTGCGTGTCAGGATG
CCGATCTCATCAGATTTATCCAATCCCTCGCACTTCATCACAAAGATCAC
TCGATATGAAAAGGTAGTCAACATTCCCAAACTCATGACTATNCTGGATG
AGCTTCTTCCAATTTCCCATGAGATGGCAAAGAGAACCTCACNTGAAATT
GAAACTTACGAACCCCNNGTGTGTGAGCCACATGAGATTCTGGAGATTTA
TCGCAGTACTAGACCCCACCTTCACTTGGAAAATTTACTTTGAAG
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