EY711608 | Citrus Genome Database

Overview


Name	EY711608
Unique Name	EY711608
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	916

Libraries


Library Name	Type
Sweet orange fruit, development stadium (3 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC5_ARATH (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.763e-84
Identity = 141/158 (89.24%), Postives = 145/158 (91.77%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGV IILVGTKLDLR   QFFIDHP AVPITT  GEEL++    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIEC 158

HSP 2 Score: 52.373 bits (124), Expect = 6.763e-84
Identity = 26/30 (86.67%), Postives = 26/30 (86.67%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IGSP YIEC SKTQQNVKAVFDAAIK  LQ
Sbjct:  150 IGSPIYIECSSKTQQNVKAVFDAAIKVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 4.345e-83
Identity = 137/158 (86.71%), Postives = 145/158 (91.77%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGV I+LVGTKLDLR   QFFIDHP AVPITTA GEEL +    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIEC 158

HSP 2 Score: 53.1434 bits (126), Expect = 4.345e-83
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+PAYIEC SKTQQNVKAVFDAAIK  LQ
Sbjct:  150 IGAPAYIECSSKTQQNVKAVFDAAIKVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 7.393e-83
Identity = 138/158 (87.34%), Postives = 142/158 (89.87%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYEN+AKKWIPELRHYAPGV IILVGTKLDLR    F  DHP AVPITTA GEEL +    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGEELRKLIGAPAYIEC 158

HSP 2 Score: 53.1434 bits (126), Expect = 7.393e-83
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+PAYIEC SKTQQNVKAVFDAAIK  LQ
Sbjct:  150 IGAPAYIECSSKTQQNVKAVFDAAIKVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 2.140e-82
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE 694
            MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPELRHYAPGV IILVGTKLDLR   QFF+DHP AVPI+TA GEEL +
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGEELRK 148

HSP 2 Score: 49.6766 bits (117), Expect = 2.140e-82
Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+ AYIEC SKTQQN+KAVFDAAIK  LQ
Sbjct:  150 IGAAAYIECSSKTQQNIKAVFDAAIKVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 2.792e-82
Identity = 137/158 (86.71%), Postives = 145/158 (91.77%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGV I+LVGTKLDLR   QFFIDHP AVPITTA GEEL +    P +I C
Sbjct:    1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIEC 158

HSP 2 Score: 49.2914 bits (116), Expect = 2.792e-82
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+P YIEC SKTQ+NVKAVFDAAI+  LQ
Sbjct:  150 IGAPTYIECSSKTQENVKAVFDAAIRVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC1_ARATH (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana GN=ARAC1 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 4.750e-82
Identity = 137/158 (86.71%), Postives = 146/158 (92.41%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGV I+LVGTKLDLR   QFFIDHP AVPITTA GEEL++    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIEC 158

HSP 2 Score: 49.2914 bits (116), Expect = 4.750e-82
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+PAYIEC SKTQ+NVK VFDAAI+  LQ
Sbjct:  150 IGAPAYIECSSKTQENVKGVFDAAIRVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 6.195e-82
Identity = 138/158 (87.34%), Postives = 145/158 (91.77%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGV IILVGTKLDLR   QFF+DHP AVPITTA GEEL +    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIEC 158

HSP 2 Score: 48.1358 bits (113), Expect = 6.195e-82
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            I +PAYIEC SK+QQNVKAVFDAAI+  LQ
Sbjct:  150 INAPAYIECSSKSQQNVKAVFDAAIRVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.054e-81
Identity = 132/158 (83.54%), Postives = 145/158 (91.77%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAPGV IILVGTKLDLR   QFF +HP AVPI+TA GEEL++    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIEC 158

HSP 2 Score: 51.9878 bits (123), Expect = 1.054e-81
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+PAYIEC +KTQQNVKAVFDAAIK  LQ
Sbjct:  150 IGAPAYIECSAKTQQNVKAVFDAAIKVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.054e-81
Identity = 138/158 (87.34%), Postives = 145/158 (91.77%), Query Frame = 2

Query:  251 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE----PDWISC 712
            MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGV IILVGTKLDLR   QFF+DHP AVPITTA GEEL +    P +I C
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIEC 158

HSP 2 Score: 46.595 bits (109), Expect = 1.054e-81
Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IG+P YIEC SKTQ NVK VFDAAIK  LQ
Sbjct:  150 IGAPYYIECSSKTQLNVKGVFDAAIKVVLQ 179

[Close]

BLAST of EY711608 vs. ExPASy Swiss-Prot
Match: RAC4_ARATH (Rac-like GTP-binding protein ARAC4 OS=Arabidopsis thaliana GN=ARAC4 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.793e-81
Identity = 135/146 (92.47%), Postives = 139/146 (95.21%), Query Frame = 2

Query:  257 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVSIILVGTKLDLRGR*QFFIDHPXAVPITTAPGEELEE 694
            ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYEN+AKKWIPELRHYAPGV IILVGTKLDLR   QFFIDHP AVPITT  GEEL++
Sbjct:    2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKK 147

HSP 2 Score: 49.6766 bits (117), Expect = 1.793e-81
Identity = 25/30 (83.33%), Postives = 25/30 (83.33%), Query Frame = 3

Query:  699 IGSPAYIECKSKTQQNVKAVFDAAIKGGLQ 788
            IGS  YIEC SKTQQNVKAVFDAAIK  LQ
Sbjct:  149 IGSAVYIECSSKTQQNVKAVFDAAIKVVLQ 178

The following BLAST results are available for this feature:

BLAST of EY711608 vs. ExPASy Swiss-Prot

BLAST of EY711608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
RAC5_ARATH	6.763e-84	89.24	Rac-like GTP-binding protein ARAC5 OS=Arabidopsis ...	[more]
RAC1_BETVU	4.345e-83	86.71	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris...	[more]
RAC1_LOTJA	7.393e-83	87.34	Rac-like GTP-binding protein RAC1 OS=Lotus japonic...	[more]
RAC5_ORYSJ	2.140e-82	91.89	Rac-like GTP-binding protein 5 OS=Oryza sativa sub...	[more]
RAC11_ARATH	2.792e-82	86.71	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis...	[more]
RAC1_ARATH	4.750e-82	86.71	Rac-like GTP-binding protein ARAC1 OS=Arabidopsis ...	[more]
RHO1_PEA	6.195e-82	87.34	Rac-like GTP-binding protein RHO1 OS=Pisum sativum...	[more]
RAC3_ARATH	1.054e-81	83.54	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis ...	[more]
RAC6_ORYSJ	1.054e-81	87.34	Rac-like GTP-binding protein 6 OS=Oryza sativa sub...	[more]
RAC4_ARATH	1.793e-81	92.47	Rac-like GTP-binding protein ARAC4 OS=Arabidopsis ...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-702-009-F10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY711608 ID=EY711608; Name=EY711608; organism=Citrus sinensis; type=EST; length=916bp
CTTTTCGCCGCTGCTCTCTCTCTCTGTCTCTCTGTCTCTCTGCAGATTAG
GGTTTAATTACCTTCGCTACCTTAATTCAAGACTTCTTTTCACTCAATTC
CTAAGCTCCCGTTGACGAACTGAGTTGTTCTCTTTTGGTCTTCGAAATGA
GTGAAGTCTGAGGCAAGAAGTGTACGTAAAGAACCTGAGCAGTCTTCCAA
GGGCATTGTCGGAATAAACTAAAAAAGAGAATAGAGATCTGGTGGCGCAA
ATGAGCGCGTCGAGGTTCATAAAGTGCGTCACTGTCGGTGACGGCGCCGT
CGGAAAAACTTGCATGCTTATTTCTTACACCAGCAACACTTTCCCAACGG
ACTATGTGCCAACTGTCTTTGACAATTTCAGTGCGAATGTGGTTGTTGAT
GGGAGTACGGTCAACTTAGGGTTATGGGACACTGCTGGTCAGGAGGATTA
CAATAGATTGAGACCGTTAAGTTATAGAGGAGCTGATGTGTTTATTCTTG
CATTCTCACTGATTAGCAAGGCCAGCTATGAAAATGTCGCCAAGAAGTGG
ATTCCAGAACTGAGGCACTATGCGCCCGGTGTTTCAATAATTCTTGTTGG
GACTAAGCTAGATCTTCGGGGACGATAGCAGTTCTTTATTGATCATCCAN
GTGCAGTACCCATTACTACAGCTCCGGGAGAGGAACTTGAGGAACCTGAT
TGGATCTCCTGCGTACATCGAATGTAAGTCAAAGACACAACAGAATGTGA
AAGCAGTTTTTGATGCTGCTATTAAAGGGGGGCTCCAGCCTCCAAAGCAC
AAAAAAAGAAGAAGAAGCCCATAAGGGCTTGCTCCTACTGGGACCCAAGA
AAGACTAGTCTTGACAACAAAAATGACTTAAATGGCAGCCTAACGGCGGC
TTTTCCGCCTGATTTT