EY711593

Overview
NameEY711593
Unique NameEY711593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_ARATH (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Arabidopsis thaliana GN=ATS1 PE=1 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 7.814e-61
Identity = 132/251 (52.59%), Postives = 169/251 (67.33%), Query Frame = 3
Query:  150 VSFRSGARRTSATCPCASFSSFNVRAMAKMVQDREXXXXXXXXXDEQNKKMLNIEVNHSRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            VSFR  A++     P  S    +VRAM+++VQD+E         +E   +  + E++HSRTFLD RSEQDLLSGI +E EAGRLP+N+A GMEELY NYKNAV  SG SRADE V+SNM+VAFDR+LL +E+P+TF+ YHK++REPFDYYMF   YIRPL+DF++SYVGN S+F E+E+K+ QGHNIVLISNH+ +     +   L++Q     E      G       L   FSM    +CV  KKHM D
Sbjct:   39 VSFRLTAKKLFLP-PLRSRGGVSVRAMSELVQDKESSVAASIAFNEAAGETPS-ELSHSRTFLDARSEQDLLSGIKKEAEAGRLPANVAAGMEELYWNYKNAVLSSGASRADETVVSNMSVAFDRMLLGVEDPYTFNPYHKAVREPFDYYMFVHTYIRPLIDFKNSYVGNASIFSELEDKIRQGHNIVLISNHQSEADPAVISLLLEAQSPFIGENIKCVAGDRVITDPLCKPFSMGRNLICVYSKKHMND 287          
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_CUCSA (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.639e-60
Identity = 125/235 (53.19%), Postives = 162/235 (68.94%), Query Frame = 3
Query:  201 SFSSFNV-RAMAKMVQDREXXXXXXXXXDEQNKKMLNIEVNHSRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            SF  F+  RAMA+++QD+E           +N      +  HSR FLD+RSE++LLS I RE EAG+LPSN+A GMEELY NYKNAVF+SGN +ADEIVLSNM VA DR+LLD+E+PF FS +HK++REPFDYY FGQNY+RPL+DF +S+VGN+SLF ++EEKL+QGHN+VLISNH+ +     +   L+       E  ++  G       L   FS+    +CV  KKHMLD
Sbjct:   70 SFLRFSASRAMAELIQDKESAHTPSTTDVTRN------DPPHSRAFLDLRSEEELLSCIRRETEAGKLPSNVAAGMEELYQNYKNAVFESGNPKADEIVLSNMTVALDRILLDVEDPFMFSPHHKAIREPFDYYTFGQNYVRPLIDFENSFVGNLSLFKDIEEKLHQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENMIYVAGDRVIADPLCKPFSIGRNLICVYSKKHMLD 298          
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_CUCMO (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucurbita moschata PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.353e-57
Identity = 118/225 (52.44%), Postives = 152/225 (67.56%), Query Frame = 3
Query:  228 MAKMVQDREXXXXXXXXXDEQNKKMLNIEVNHSRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            MA+++QD+E            +      E  HSR FLDVRSE++LLS I +E EAG+LP N+A GMEELY NY+NAV +SGN +ADEIVLSNM VA DR+LLD+E+PF FSS+HK++REPFDYY+FGQNYIRPL+DF +S+VGN+SLF ++EEKL QGHN+VLISNH+ +     +   L+       E  +   G       L   FS+    +CV  KKHM D
Sbjct:    1 MAELIQDKESAQSAATAAAASSGYERRNEPAHSRKFLDVRSEEELLSCIKKETEAGKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIGRNLICVYSKKHMFD 225          
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_CARTI (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Carthamus tinctorius PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.976e-52
Identity = 111/194 (57.22%), Postives = 135/194 (69.59%), Query Frame = 3
Query:  321 HSRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            HSRTF+D RSEQDLLSGI RE+EAG LP ++A  MEELY NYKNAV QS    A++IVLSNM VAFDR+ LD++EPF FS YH+++ EPF+YYMFGQNYIRPLV+FR SYVGNVS+F  MEE+L QG  +VLISNH+ +     +   L++      E  ++  G       L   FSM    LCV  KKHM D
Sbjct:   94 HSRTFIDARSEQDLLSGIQRELEAGTLPKHIAQAMEELYQNYKNAVLQSAAPHAEDIVLSNMRVAFDRMFLDVKEPFEFSPYHEAILEPFNYYMFGQNYIRPLVNFRESYVGNVSVFGVMEEQLKQGDKVVLISNHQTEADPAVIALMLETTNPHISENIIYVAGDRVITDPLCKPFSMGRNLLCVYSKKHMND 287          
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_PHAVU (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Phaseolus vulgaris GN=PLSB PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.659e-52
Identity = 131/305 (42.95%), Postives = 177/305 (58.03%), Query Frame = 3
Query:    3 TRPLMSSLSLTFFAT-TAPRVLVXXXXXXXXXXXXXXXXXATTARWHSTAVSFRSGARRTSATCPCASFSSF----NVRAMAKMVQDREXXXXXXXXXDEQNKKMLNIEVNHSRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            T  L+S+   TFF T T PRV +                 ++T+   S+++S RS      +T P  S SS     N  A AK                  +   ++  V+ SRTFL+ +SEQD+ +GI +EVEAG LP+N+A GMEE+Y+NYK AV QSG+ +A+EIVLSNM    DRV LD+ +PF F  +HK+ REPFDYY+FGQNYIRPLVDF+++YVGN+ LF EMEEKL QGHNI+L+SNH+ +     +   L+++     E   +  G       L   FS+    +CV  KKHMLD
Sbjct:   25 TMLLLSTPPTTFFPTSTTPRVTLL----------------SSTSSSSSSSISLRS------STAPSPSCSSVTPKDNCLASAK-----------------HSPPNMSASVS-SRTFLNAQSEQDVFAGIKKEVEAGSLPANVAAGMEEVYNNYKKAVIQSGDPKANEIVLSNMIALLDRVFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVDFKNAYVGNMPLFIEMEEKLKQGHNIILMSNHQTEADPAIISLLLETRLPYIAENLTYVAGDRVITDPLSKPFSIGRNLICVYSKKHMLD 289          
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_PEA (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Pisum sativum GN=GPAT PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.519e-51
Identity = 104/193 (53.89%), Postives = 139/193 (72.02%), Query Frame = 3
Query:  324 SRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            SRTFL+ ++EQD+LSGI +EVEAG LP+++A GMEE+Y NYK+AV +SG+ +A+EIVLSNM    DR+ LD++EPF F ++HK+ REPFDYYMFGQNYIRPLVDF +SYVGN+ LF +MEE+L QGHNI+L+SNH+ +     +   L+ +     E  ++  G       L   FS+    +CV  KKHMLD
Sbjct:   93 SRTFLNAQNEQDVLSGIKKEVEAGTLPASIAAGMEEVYLNYKSAVIKSGDPKANEIVLSNMTALLDRIFLDVKEPFVFEAHHKAKREPFDYYMFGQNYIRPLVDFETSYVGNMPLFIQMEEQLKQGHNIILMSNHQSEADPAIIALLLEMRLPHIAENLIYVAGDRVITVPLCKPFSIGRNLICVYSKKHMLD 285          
BLAST of EY711593 vs. ExPASy Swiss-Prot
Match: PLSB_SPIOL (Glycerol-3-phosphate acyltransferase, chloroplastic OS=Spinacia oleracea GN=GAT PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.422e-47
Identity = 113/242 (46.69%), Postives = 147/242 (60.74%), Query Frame = 3
Query:  177 TSATCPCASFSSFNVRAMAKMVQDREXXXXXXXXXDEQNKKMLNIEVNHSRTFLDVRSEQDLLSGIGREVEAGRLPSNLATGMEELYHNYKNAVFQSGNSRADEIVLSNMAVAFDRVLLDIEEPFTFSSYHKSMREPFDYYMFGQNYIRPLVDFRSSYVGNVSLFFEMEEKLNQGHNIVLISNHKLKQTLLSLLYCLKSQPTXC*EPDLHSRGQXYNRSSL-XAFSMEGIXLCVL-KKHMLD 896
            +S+T   AS+S     A AK V++           D Q        +  SRT+ +VRS ++L+S I RE E GRLP ++A  ME L+H Y+NAV  SG S ADEIVLSNM+V  D VLLDIE+PF F  +HK++REP DYY FGQ+YIRPLVDF +SYVGN+++F EMEEKL QG NI+L+SNH+ +     +   L+   +   E  ++  G       L   FSM    LCV  KKHM D
Sbjct:   71 SSSTSASASYS-----AAAKSVEEENHEIPVKKEDDNQ--------LLRSRTYRNVRSAEELISEIKRESEIGRLPKSVAYAMEGLFHYYRNAVLSSGISHADEIVLSNMSVMLDFVLLDIEDPFVFPPFHKAIREPADYYSFGQDYIRPLVDFGNSYVGNIAIFQEMEEKLKQGDNIILMSNHQSEADPAVIALLLEKTNSLIAENLIYIAGDRVITDPLCKPFSMGRNLLCVYSKKHMYD 299          
The following BLAST results are available for this feature:
BLAST of EY711593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PLSB_ARATH7.814e-6152.59Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_CUCSA8.639e-6053.19Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_CUCMO2.353e-5752.44Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_CARTI2.976e-5257.22Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_PHAVU8.659e-5242.95Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_PEA2.519e-5153.89Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
PLSB_SPIOL6.422e-4746.69Glycerol-3-phosphate acyltransferase, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-E04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711593 ID=EY711593; Name=EY711593; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCTGATGTCTTCTCTGTCTCTCACATTCTTCGCCACGACA
GCGCCTAGGGTTTTGGTTCCGTCTTCGTCGTCTAATCCGAAGCTCTCTCC
TTCTTCTTATTCTTTTTCAGCAACAACCGCGCGTTGGCATTCGACTGCGG
TGTCGTTTCGATCCGGTGCGCGGAGGACTTCCGCCACGTGTCCTTGCGCG
TCCTTCAGCTCCTTCAACGTTCGAGCAATGGCTAAGATGGTTCAGGACAG
GGAGTCCGCCGTGTCGTCGTCGTCGGCGAGTGACGAGCAGAACAAGAAGA
TGCTCAATATAGAGGTTAATCACTCCCGTACGTTTCTCGACGTTCGTTCT
GAGCAAGATCTTCTGTCTGGAATTGGCAGGGAAGTTGAAGCAGGAAGGCT
GCCATCAAATCTTGCCACTGGGATGGAAGAGTTGTATCACAATTATAAAA
ATGCAGTCTTTCAAAGTGGAAATTCTAGGGCTGATGAGATTGTATTGTCA
AATATGGCTGTTGCATTTGATCGAGTATTGTTGGACATTGAGGAACCTTT
TACGTTCTCATCTTATCACAAGTCAATGAGAGAGCCTTTTGACTATTACA
TGTTTGGTCAAAATTATATACGACCTTTGGTTGATTTCAGAAGTTCATAC
GTTGGCAATGTATCCCTTTTCTTTGAAATGGAAGAGAAACTTAACCAGGG
CCATAATATCGTATTGATCTCTAACCACAAACTGAAGCAGACCCTGCTAT
CATTGCTTTATTGCTTGAAATCACAACCCACATGNTGCTGAGAACCTGAC
CTACATAGCAGGGGACAGANGTATAACCGATCCTCTCTGNCAGCCTTCAG
CATGGAAGGAATCTNATTGTGTGTACTCAAAAAGCACATGCTTGATG
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