EY711589

Overview
NameEY711589
Unique NameEY711589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: HYIN_PSESY (Indoleacetamide hydrolase OS=Pseudomonas syringae pv. syringae GN=iaaH PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.958e-27
Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = 3
Query:   81 GVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAING 563
            GV ++ KD I     P T GT+ +        DA  V +L+  GA++ GK NMHEL  G + INPH+G   NP  P                  + P+++G D GGS+R+PAA CG+ GF+PT GR+  +G++P++ T   VG+L  T  DA  VY  ++G
Sbjct:   65 GVPVSFKDNICVRGLPLTAGTRGMSGFI-ADQDAAIVSQLKALGAVVAGKNNMHELSFGVTSINPHWGAVGNPVAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAFCGITGFRPTTGRLSTAGIIPVSHTKDCVGLLTRTAGDAEFVYGLLSG 224          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_THEEB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermosynechococcus elongatus (strain BP-1) GN=gatA PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.699e-26
Identity = 72/191 (37.70%), Postives = 101/191 (52.88%), Query Frame = 3
Query:    3 TRPDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWL-HKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            TR   L QA E   R   GE I +L G+ +A+KD +      TT  +K L H V P   ++    +L+  GAI+VGKTN+ E   G+S  N  +G   NP++P +++               C  ALG D GGS+R PAA CGVVG KPT+G +   G++    ++  +G LA TV DA ++  AI G  P
Sbjct:   43 TRDRALAQAAEVDKRLAAGEEIGLLTGIPLAIKDNLCTYGVRTTCASKMLEHFVPPY--ESTVTEKLQAAGAIMVGKTNLDEFAMGSSTENSAFGFTANPWNPERVSGGSSGGSAAAVAARECAAALGSDTGGSIRQPAAFCGVVGLKPTYGLVSRYGLVAYASSLDQIGPLAPTVTDAAILLGAIAGHDP 231          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_DESMR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=gatA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.218e-26
Identity = 69/176 (39.20%), Postives = 90/176 (51.14%), Query Frame = 3
Query:   63 PISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLPSQQPTC 590
            P   L GV + VKD I     PTT G+K L    P   DA C+ ++R  GA+++GK NM E   G+S  N  Y V  NP+D  K+                C  ALG D GGS+R PAA CG VG KPT+GR+   G++    ++  +G L  T +DA  V   I GP P +  TC
Sbjct:   66 PDQRLWGVPVLVKDAICVKDAPTTCGSKILENFTPFY-DASCIEKMRAAGAVILGKANMDEFAMGSSTENSAYKVTANPWDLGKVPGGSSGGSAAAVAAGQCFAALGTDTGGSIRQPAAFCGTVGIKPTYGRVSRYGLVAYGSSLDQIGPLTRTADDAAAVLGVIAGPDP-KDSTC 239          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: QRSL1_MACFA (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Macaca fascicularis GN=QRSL1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.897e-26
Identity = 79/231 (34.20%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   18 LKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK--------------------ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLPSQQPTC-------FIAKSIVPTAEVC 629
            LKQA ES  RYK G+ +  LDG+ +AVKD    S   TT  +  L    P   +A  V +L   GA+L+GKTN+ E   G+   +  +G  +NP+  SK                    IT               C  ALG D GGS R PAA CG+VGFKP++G +   G++PL  ++ + GIL   V+DA +V  A+ GP P    T        F+  S+   +++C
Sbjct:   49 LKQAEESEKRYKNGQSLGDLDGIPVAVKDNFSTSGIETTCASNMLKGYIP-PYNATVVQKLLDQGALLMGKTNLDEFAMGSGSTDGIFGPVKNPWSYSKQYREKRKQNPHSKNEDSDWLITGGSSGGSAAAVSAFTCYAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPDPKDSTTVHDPINKPFMLPSLADVSKLC 278          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: QRSL1_HUMAN (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Homo sapiens GN=QRSL1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.897e-26
Identity = 80/231 (34.63%), Postives = 111/231 (48.05%), Query Frame = 3
Query:   18 LKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSK--------------------ITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLPSQQPTC-------FIAKSIVPTAEVC 629
            LKQA ES  RYK G+ +  LDG+ IAVKD    S   TT  +  L    P   +A  V +L   GA+L+GKTN+ E   G+   +  +G  +NP+  SK                    IT               C  ALG D GGS R PAA CG+VGFKP++G +   G++PL  ++ + GIL   V+DA +V  A+ GP P    T        F+  S+   +++C
Sbjct:   49 LKQAEESEKRYKNGQSLGDLDGIPIAVKDNFSTSGIETTCASNMLKGYIP-PYNATVVQKLLDQGALLMGKTNLDEFAMGSGSTDGVFGPVKNPWSYSKQYREKRKQNPHSENEDSDWLITGGSSGGSAAAVSAFTCYAALGSDTGGSTRNPAAHCGLVGFKPSYGLVSRHGLIPLVNSMDVPGILTRCVDDAAIVLGALAGPDPRDSTTVHEPINKPFMLPSLADVSKLC 278          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: HYIN_PSESS (Indoleacetamide hydrolase OS=Pseudomonas syringae pv. savastanoi GN=iaaH PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.942e-26
Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 3
Query:   54 KGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAING 563
            KG P   L G+ ++ KD I     P T GT+ +        DA  V +LR  GA++ GK NMHEL  G + INPH+G   NP  P                  + P+++G D GGS+R+PAA CG+ GF+PT GR   +G++P++ T   VG+L  T  DA  +Y  ++G
Sbjct:   59 KGTP---LWGMPVSFKDNICVRGLPLTAGTRGMSGF-VSDQDAAIVSQLRALGAVVAGKNNMHELSFGVTSINPHWGTVGNPVAPGYCAGGSSGGSAAAVASGIVPLSVGTDTGGSIRIPAAFCGITGFRPTTGRWSTAGIIPVSHTKDCVGLLTRTAGDAGFLYGLLSG 224          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_SYNP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gatA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 3
Query:    3 TRPDILKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            T+   L QA +   +   GE I +L+G+ IA+KD +      TT  ++ L    P T ++     L+  GAI+VGKTN+ E   G+S  N  Y V  NP+D +++                 P+ALG D GGS+R PA+LCGVVG KPT+G +   G++    ++  +G  A TVED  ++  AI G  P
Sbjct:   43 TKEQALAQAAQVDAKIAAGETIGLLEGIPIAIKDNLCTKGIQTTCASRILEGFVP-TYESTVTQELQEAGAIMVGKTNLDEFAMGSSTENSGYQVTGNPWDVTRVPGGSSGGSAAAVAAGEAPIALGSDTGGSIRQPASLCGVVGLKPTYGLVSRFGLVAYASSLDQIGPFARTVEDTAILLEAIAGHDP 231          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_FRASC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Frankia sp. (strain CcI3) GN=gatA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 70/176 (39.77%), Postives = 95/176 (53.98%), Query Frame = 3
Query:   45 RYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            R   GE +  L GV +A+KD       PTT G++ L    P   DA  V RLR    +L+GK NM E   G+S  N  +G  RNP+D ++I                 P+ALG D GGS+R PAALCG+VG KPT+G +   G++  + ++   G LA TV DA +++AAI G  P
Sbjct:   75 RRAAGERLGPLAGVPLALKDVFTTRGMPTTCGSRILEGWHP-PYDATVVSRLRAADVVLLGKANMDEFAMGSSTENSAFGPTRNPWDVTRIPGGSSGGSAAAVAAFEAPLALGTDTGGSIRQPAALCGLVGVKPTYGGVSRYGLVAFSSSLDQAGPLARTVTDAALLHAAIAGHDP 249          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_CHLSY (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=gatA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 68/185 (36.76%), Postives = 96/185 (51.89%), Query Frame = 3
Query:   18 LKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            L  A  +  R ++G  +  LDG+ IA+KD I     PTT G++ L   RP   +A  + RL   GA+LVGK N  E   G+S  N  Y +  NP+DP+++                 P  LG D GGS+R PAALCG+ G KPT+GR+   G++    ++  +G +A TV D  V+   I G  P
Sbjct:   53 LAAARAADERRQQGRSLGPLDGIPIAIKDVICTDGVPTTAGSRILAGFRP-PYNATVIERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGHDP 236          
BLAST of EY711589 vs. ExPASy Swiss-Prot
Match: GATA_CHLAA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=gatA PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.430e-26
Identity = 68/185 (36.76%), Postives = 96/185 (51.89%), Query Frame = 3
Query:   18 LKQATESTLRYKKGEPISVLDGVLIAVKDEIDCSPYPTTGGTKWLHKVRPCTGDACCVMRLRLCGAILVGKTNMHELGAGTSGINPHYGVARNPYDPSKITXXXXXXXXXXXXXXLCPVALGVDGGGSVRMPAALCGVVGFKPTFGRIPLSGVLPLNWTVXMVGILAATVEDALVVYAAINGPLP 572
            L  A  +  R ++G  +  LDG+ IA+KD I     PTT G++ L   RP   +A  + RL   GA+LVGK N  E   G+S  N  Y +  NP+DP+++                 P  LG D GGS+R PAALCG+ G KPT+GR+   G++    ++  +G +A TV D  V+   I G  P
Sbjct:   53 LAAARAADERRQQGRSLGPLDGIPIAIKDVICTDGVPTTAGSRILAGFRP-PYNATVIERLVAAGAVLVGKLNCDEFAMGSSTENSAYQITTNPWDPTRVPGGSSGGSAAAVAAGQVPATLGTDTGGSIRQPAALCGISGLKPTYGRVSRYGLIAYGSSLDQIGPMAWTVADLAVLLNVIAGHDP 236          
The following BLAST results are available for this feature:
BLAST of EY711589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HYIN_PSESY9.958e-2737.89Indoleacetamide hydrolase OS=Pseudomonas syringae ... [more]
GATA_THEEB1.699e-2637.70Glutamyl-tRNA(Gln) amidotransferase subunit A OS=T... [more]
GATA_DESMR2.218e-2639.20Glutamyl-tRNA(Gln) amidotransferase subunit A OS=D... [more]
QRSL1_MACFA2.897e-2634.20Glutamyl-tRNA(Gln) amidotransferase subunit A homo... [more]
QRSL1_HUMAN2.897e-2634.63Glutamyl-tRNA(Gln) amidotransferase subunit A homo... [more]
HYIN_PSESS4.942e-2637.65Indoleacetamide hydrolase OS=Pseudomonas syringae ... [more]
GATA_SYNP28.430e-2635.79Glutamyl-tRNA(Gln) amidotransferase subunit A OS=S... [more]
GATA_FRASC8.430e-2639.77Glutamyl-tRNA(Gln) amidotransferase subunit A OS=F... [more]
GATA_CHLSY8.430e-2636.76Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]
GATA_CHLAA8.430e-2636.76Glutamyl-tRNA(Gln) amidotransferase subunit A OS=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711589 ID=EY711589; Name=EY711589; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGGATATTCTAAAGCAAGCTACAGAGTCGACTCTTCGGTAT
AAAAAAGGAGAGCCAATATCGGTTCTAGATGGAGTCCTAATTGCAGTCAA
GGATGAAATTGATTGTTCTCCTTACCCAACTACAGGAGGCACCAAGTGGT
TGCATAAAGTTAGACCTTGCACAGGTGATGCATGCTGCGTTATGCGCCTC
AGATTGTGCGGCGCCATACTTGTTGGGAAAACTAATATGCATGAGCTCGG
GGCTGGAACAAGTGGGATAAATCCTCATTATGGGGTCGCTAGAAATCCAT
ACGACCCCAGCAAAATCACTGGGGGTTCTTCTAGTGGATCAGCAGCAGTG
GTGGCTGCAGGATTGTGCCCTGTCGCCCTTGGTGTTGATGGAGGAGGATC
CGTGCGGATGCCTGCAGCTCTCTGTGGTGTTGTTGGTTTTAAGCCAACTT
TCGGGCGCATACCTCTTTCTGGTGTTCTTCCACTGAACTGGACAGTANGA
ATGGTTGGAATTTTAGCAGCCACTGTAGAAGATGCATTGGTTGTTTATGC
AGCTATTAATGGTCCACTTCCTTCCCAACAGCCCACTTGTTTCATTGCAA
AAAGTATCGTTCCCACTGCTGAAGTCTGCAACATCAATATCAGCCATCCA
ATTGGCCAAGTATGATGCGTGGTTCAACGATTGCAGTGACGATATAAGAG
TATGCTGCTCTCATGCAGTGGACAAGCTTTGCGAACGTTATTGCTGGAAG
GTTGTAAAGGGTACTATCCCGAATATAAGAAGGATGGCGCTGGCACCATA
TATTGATATTGGGTTCTGAATGTAGCACTTCGCTCTCCTTCTATCTGCAA
AAATAAATTGTTCAAATCAAGGATGGAATTGCGGGGAACCCCTTAAGTCT
ATGGGTCTTTTCACAC
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