EY711581

Overview
NameEY711581
Unique NameEY711581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: KDPE_ECOLI (KDP operon transcriptional regulatory protein kdpE OS=Escherichia coli (strain K12) GN=kdpE PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 3.399e-51
Identity = 99/174 (56.90%), Postives = 127/174 (72.99%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRLV 522
            LGLPDGDG + I +LR W AVP++VLSAR  E +K+AALDAGADDYL+KPFG+ EL AR+R  LRRH  + T A    V F ++ VDLA   + R    VHLTPIE+RLL  ++    +VLT RQLL +VWG + V+ +HYLR++M HLRQKLE DPA+P++FITE  +GYR +
Sbjct:   53 LGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRH--SATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFM 224          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: REGX3_MYCTU (Sensory transduction protein regX3 OS=Mycobacterium tuberculosis GN=regX3 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30
Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRLVG 525
            L LP   G  +  +LR   +VP+++++ARD E +KV  L+ GADDY+TKP+   EL+ARIRA LRR G   +  +   +  G + +D+  H V   G  + L   E+ LL  ++R   RVLT  QL+  VWG DYV     L VH+  LR K+EADPA P + +T   +GY+L G
Sbjct:   53 LMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: REGX3_MYCBO (Sensory transduction protein regX3 OS=Mycobacterium bovis GN=regX3 PE=3 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.137e-30
Identity = 73/175 (41.71%), Postives = 103/175 (58.86%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRLVG 525
            L LP   G  +  +LR   +VP+++++ARD E +KV  L+ GADDY+TKP+   EL+ARIRA LRR G   +  +   +  G + +D+  H V   G  + L   E+ LL  ++R   RVLT  QL+  VWG DYV     L VH+  LR K+EADPA P + +T   +GY+L G
Sbjct:   53 LMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 227          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: REGX3_MYCLE (Sensory transduction protein regX3 OS=Mycobacterium leprae GN=rgx3 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.532e-30
Identity = 72/173 (41.62%), Postives = 103/173 (59.54%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRL 519
            L LP   G  +  +LR   +VP+++++ARD E +KV  L+ GADDY+TKP+   EL+ARIRA LRR G   +  +   +  G + +D+  H V   G  + L   E+ LL  ++R   RVLT  QL+  VWG+DYV     L VH+  LR K+EADPA P + +T   +GY+L
Sbjct:   24 LMLPGMSGTDVYKQLRVRSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEISDGVLESGPLRMDVERHVVSVNGYAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGVDYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL 196          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: REGX3_MYCS2 (Sensory transduction protein regX3 OS=Mycobacterium smegmatis GN=regX3 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.642e-30
Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 1
Query:    1 LGLPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVA-FGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRLVG 525
            L LP   G  +  +LR   +VP+++++ARD E +KV  L+ GADDY+TKP+   EL+ARIRA LRR        A   V   G + +D+  H V   G P+ L   E+ LL  ++R   RVLT  QL+  VWG DYV     L VH+  LR K+E DPA P + +T   +GY+L G
Sbjct:   53 LMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADNDDAGADDGVLEAGPVRMDVERHVVSVNGEPITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKLEG 228          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: MPRA_MYCVP (Response regulator mprA OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mprA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.007e-28
Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLA-VPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRHGQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRL 519
            +P  DG ++  +LR     +PILVL+ARD   E+VA LDAGADDYL KPF + ELLAR+RA LRR         ++ + F ++ +D  T EV R   P+ LT  E+ LL  +I    RVLT  ++L EVWG D+    + L V++ +LR+K EA+  +P+   T   VGY L
Sbjct:   56 MPRLDGLEVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTTPDDGAGESAAMTFSDLSLDPVTREVTRGDRPISLTRTEFSLLEMLIANPRRVLTRSRILEEVWGFDFPTSGNALEVYVGYLRRKTEAE-GEPRLIHTVRGVGYVL 226          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: WALR_STAAW (Transcriptional regulatory protein walR OS=Staphylococcus aureus (strain MW2) GN=walR PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.838e-27
Identity = 66/176 (37.50%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRH-----GQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRL 519
            LP  DG ++  E+R    +PI++L+A+D E +KV  L+ GADDY+TKPF   EL+AR++A LRRH       TG V  T+++   +I +    + + ++G  + LT  E+ L   + +   +V+T   LL  VWG DY      + V +  LR+K+E DP+ P+Y +T   VGY L
Sbjct:   56 LPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQDTGNV--TNEITIKDIVIYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFL 229          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: WALR_STAAU (Transcriptional regulatory protein walR OS=Staphylococcus aureus GN=walR PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.838e-27
Identity = 66/176 (37.50%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRH-----GQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRL 519
            LP  DG ++  E+R    +PI++L+A+D E +KV  L+ GADDY+TKPF   EL+AR++A LRRH       TG V  T+++   +I +    + + ++G  + LT  E+ L   + +   +V+T   LL  VWG DY      + V +  LR+K+E DP+ P+Y +T   VGY L
Sbjct:   56 LPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQDTGNV--TNEITIKDIVIYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFL 229          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: WALR_STAAT (Transcriptional regulatory protein walR OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=walR PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.838e-27
Identity = 66/176 (37.50%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRH-----GQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRL 519
            LP  DG ++  E+R    +PI++L+A+D E +KV  L+ GADDY+TKPF   EL+AR++A LRRH       TG V  T+++   +I +    + + ++G  + LT  E+ L   + +   +V+T   LL  VWG DY      + V +  LR+K+E DP+ P+Y +T   VGY L
Sbjct:   56 LPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQDTGNV--TNEITIKDIVIYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFL 229          
BLAST of EY711581 vs. ExPASy Swiss-Prot
Match: WALR_STAAS (Transcriptional regulatory protein walR OS=Staphylococcus aureus (strain MSSA476) GN=walR PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.838e-27
Identity = 66/176 (37.50%), Postives = 102/176 (57.95%), Query Frame = 1
Query:    7 LPDGDGKQLISELRGWLAVPILVLSARDREEEKVAALDAGADDYLTKPFGVPELLARIRAQLRRH-----GQTGTVAATSKVAFGEIEVDLATHEVWRQGLPVHLTPIEYRLLCAMIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHMAHLRQKLEADPAQPQYFITELQVGYRL 519
            LP  DG ++  E+R    +PI++L+A+D E +KV  L+ GADDY+TKPF   EL+AR++A LRRH       TG V  T+++   +I +    + + ++G  + LT  E+ L   + +   +V+T   LL  VWG DY      + V +  LR+K+E DP+ P+Y +T   VGY L
Sbjct:   56 LPGRDGMEVCREVRKKYEMPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYSQPAQDTGNV--TNEITIKDIVIYPDAYSIKKRGEDIELTHREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGVGYFL 229          
The following BLAST results are available for this feature:
BLAST of EY711581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
KDPE_ECOLI3.399e-5156.90KDP operon transcriptional regulatory protein kdpE... [more]
REGX3_MYCTU1.137e-3041.71Sensory transduction protein regX3 OS=Mycobacteriu... [more]
REGX3_MYCBO1.137e-3041.71Sensory transduction protein regX3 OS=Mycobacteriu... [more]
REGX3_MYCLE2.532e-3041.62Sensory transduction protein regX3 OS=Mycobacteriu... [more]
REGX3_MYCS25.642e-3042.05Sensory transduction protein regX3 OS=Mycobacteriu... [more]
MPRA_MYCVP9.007e-2843.02Response regulator mprA OS=Mycobacterium vanbaalen... [more]
WALR_STAAW5.838e-2737.50Transcriptional regulatory protein walR OS=Staphyl... [more]
WALR_STAAU5.838e-2737.50Transcriptional regulatory protein walR OS=Staphyl... [more]
WALR_STAAT5.838e-2737.50Transcriptional regulatory protein walR OS=Staphyl... [more]
WALR_STAAS5.838e-2737.50Transcriptional regulatory protein walR OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-D02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711581 ID=EY711581; Name=EY711581; organism=Citrus sinensis; type=EST; length=914bp
CTCGGCCTGCCGGACGGCGACGGCAAACAGTTGATCAGCGAACTGCGGGG
ATGGCTGGCGGTGCCGATCCTGGTGTTGTCGGCGCGGGATCGCGAAGAGG
AAAAAGTCGCCGCCCTGGACGCCGGCGCCGATGACTACCTGACCAAACCT
TTCGGCGTGCCCGAGTTACTGGCGCGCATCCGTGCGCAACTGCGTCGGCA
CGGGCAAACCGGCACCGTGGCGGCCACCAGCAAGGTGGCATTTGGCGAGA
TTGAGGTGGACCTGGCGACCCATGAAGTGTGGCGCCAAGGCCTGCCGGTG
CACCTGACGCCCATCGAATACCGCTTGCTGTGCGCGATGATTCGCGGGCA
GAGCCGGGTGCTCACCCATCGGCAGTTATTGCTTGAAGTGTGGGGACTGG
ACTACGTGGACCGCGCCCACTATCTGCGGGTGCATATGGCGCATCTGCGG
CAGAAGCTGGAGGCCGACCCGGCCCAGCCGCAGTACTTCATCACCGAGTT
GCAGGTGGGCTACCGACTGGTGGGCTTGTGAACAGATGCGCGGCGGCGAA
ATCGACAAACACGCGAATTTTCGGCGAGAGGTGCCGGCTGGATGGCCACA
GGGCCCAGAACTGACCCTGGTCATCGGAATGGCCGTCGAGCACGGGTTCC
AGCTGGGCCTCGGCGAGTGCTTCGCGGGCCAGGAAAGTCCGCACGTAGGC
AATGCCATGGGNCGTCATCGCAGCCCGGAGCATGGCTTCCATATTTGTTC
AAGTCAGGGCGGTGGGGCAGCGCATTNNGGTGATGGNCCGGGTGGCGGAT
AAGGTCCAGTCATGATTTTTCCNGTGGTGGCGAAGCGGTACGCAAACCGG
NTGATGCTCCAGTCCCTCAAGGAATTTGCCCGNCGNTGGCCCCCAGGACT
CGGGGATGGCCCAG
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