EY711570

Overview
NameEY711570
Unique NameEY711570
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711570 vs. ExPASy Swiss-Prot
Match: LDCA_ECOL6 (Murein tetrapeptide carboxypeptidase OS=Escherichia coli O6 GN=ldcA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 43/130 (33.08%), Postives = 62/130 (47.69%), Query Frame = -2 
Query:   10 YLISPSSAVRDPQTVELARERLAAQGFKTALDRTALAEHQRFAGTDAQRLASLTRAAKQKLP--IVMVTRGGYGMGRLLHLVDWKAMADSGKR----FVGMSDFTAFNLALLAQTGAVSYTGATAIYDFG 381
            +LI+PS             +RL   G +           +RFAGT+ +RL  L   A+   P  IV+  RGGYG  RLL  +DW+A+    +       G SDFTA    LLAQ   ++++G   + +FG
Sbjct:    5 HLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLSVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAQGNVITFSGPMLVANFG 134
[Close]
BLAST of EY711570 vs. ExPASy Swiss-Prot
Match: LDCA_ECO57 (Murein tetrapeptide carboxypeptidase OS=Escherichia coli O157:H7 GN=ldcA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 43/130 (33.08%), Postives = 62/130 (47.69%), Query Frame = -2 
Query:   10 YLISPSSAVRDPQTVELARERLAAQGFKTALDRTALAEHQRFAGTDAQRLASLTRAAKQKLP--IVMVTRGGYGMGRLLHLVDWKAMADSGK----RFVGMSDFTAFNLALLAQTGAVSYTGATAIYDFG 381
            +LI+PS             +RL   G +           +RFAGT+ +RL  L   A+   P  IV+  RGGYG  RLL  +DW+A+    +       G SDFTA    LLAQ   ++++G   + +FG
Sbjct:    5 HLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQYDPLLICGHSDFTAIQCGLLAQGNVITFSGPMLVANFG 134
[Close]
BLAST of EY711570 vs. ExPASy Swiss-Prot
Match: LDCA_ECOLI (Murein tetrapeptide carboxypeptidase OS=Escherichia coli (strain K12) GN=ldcA PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = -2 
Query:   10 YLISPSSAVRDPQTVELARERLAAQGFKTALDRTALAEHQRFAGTDAQRLASLTRAAKQKLP--IVMVTRGGYGMGRLLHLVDWKAMADSGKR----FVGMSDFTAFNLALLAQTGAVSYTGATAIYDFG 381
            +LI+PS             +RL   G +           +RFAGT+ +RL  L   A+   P  IV+  RGGYG  RLL  +DW+A+    +       G SDFTA    LLA    ++++G   + +FG
Sbjct:    5 HLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFG 134
The following BLAST results are available for this feature:
BLAST of EY711570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
LDCA_ECOL64.294e-1133.08Murein tetrapeptide carboxypeptidase OS=Escherichi... [more]
LDCA_ECO574.294e-1133.08Murein tetrapeptide carboxypeptidase OS=Escherichi... [more]
LDCA_ECOLI9.566e-1132.31Murein tetrapeptide carboxypeptidase OS=Escherichi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-C03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711570 ID=EY711570; Name=EY711570; organism=Citrus sinensis; type=EST; length=508bp
CTTCTTGCCGCCGAAGTCGTAGATGGCGGTGGCGCCGGTGTAGCTGACTG
CGCCGGTCTGCGCCAGCAGCGCCAGGTTGAAGGCGGTGAAATCGCTCATG
CCGACGAAGCGCTTGCCGCTGTCGGCCATGGCCTTCCAGTCAACCAGGTG
CAGCAGCCGGCCCATGCCGTAGCCGCCGCGCGTCACCATGACGATCGGCA
GCTTCTGCTTGGCGGCGCGCGTCAGGCTGGCCAGGCGCTGGGCGTCGGTG
CCGGCAAAGCGCTGGTGTTCGGCCAGCGCGGTGCGGTCCAGCGCGGTCTT
GAAGCCCTGCGCGGCCAGGCGCTCGCGCGCCAGCTCGACGGTCTGCGGGT
CGCGCACCGCCGACGACGGCGAGATCAGGTAGATGCCGCGCGCGTCCGGG
AAGCTGTGGACGTGGCCCGGCTCGTGGTCGTGGCTGTGGTCGTGGCCGCA
GGCCTCGCCGCATTCGTGATCGTGGTCGTGCGCGTGGCTGGCGTGGTCAT
GCGCCGGG
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