EY711566

Overview
NameEY711566
Unique NameEY711566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711566 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.548e-61
Identity = 109/143 (76.22%), Postives = 125/143 (87.41%), Query Frame = 2
Query:   23 RLHPSEPAVSPVAHRAPGFMDYQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCRWIPGISGHHEGMVNNPLHSNHYFGDESAIIENDGVVKSPNVVKFEVQLYKTRDEKYLLDLQRVQGPQ 451
            R+HP+E   SPV+HR PG M+YQG+GLR Q P ERKWALGLQSRAHPREIMTEVLKALQ+LNV WKKIGHYNMKCRW+P  S   +GM++N +H N+YFGDES+IIEN+  VKSPNVVKFE+QLYKTRD+KYLLDLQRVQGPQ
Sbjct:  378 RMHPAESVASPVSHRLPGLMEYQGVGLRSQYPVERKWALGLQSRAHPREIMTEVLKALQDLNVCWKKIGHYNMKCRWVPNSSA--DGMLSNSMHDNNYFGDESSIIENEAAVKSPNVVKFEIQLYKTRDDKYLLDLQRVQGPQ 518          
BLAST of EY711566 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.564e-48
Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 2
Query:   17 SDRLHPSEPAVSPVAHRAPGFMDYQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCRWIPGISGHHEGMVNNPLHSNHYFGDESAIIENDGVVKSPNVVKFEVQLYKTRDEKYLLDLQRVQGPQ 451
            S+ +   E   SPV H  P  +D+ G+G R Q+P +RKWALGLQS AHPREIM EVLKALQELNV WKKIGHYNMKCRW+PG++     MVNN LH    F DES+IIE+D  + SP V+KFE+QLYK R+EKYLLD+QRV GPQ
Sbjct:  355 SNPMRTPEAGASPVGHWIPAHVDHYGLGARSQVPVDRKWALGLQSHAHPREIMNEVLKALQELNVCWKKIGHYNMKCRWVPGLADGQNTMVNNQLH----FRDESSIIEDDCAMTSPTVIKFELQLYKAREEKYLLDIQRVNGPQ 495          
BLAST of EY711566 vs. ExPASy Swiss-Prot
Match: RKIN1_SECCE (Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.576e-32
Identity = 81/143 (56.64%), Postives = 93/143 (65.03%), Query Frame = 2
Query:   32 PSEPAVSPVAHRAPGFMDYQGMGLRGQLPYERKWALGLQ-SRAHPREIMTEVLKALQELNVGWKKIGH-YNMKCRWIPGISGHHEGMVNNPLHSNHYFGDESAIIEN-DGVVKSPNVVKFEVQLYKTRDEKYLLDLQRVQGPQ 451
            P E A        PG  D QG GLR     ERKWALGLQ SRA PR IM EVLKAL+ELNV WKK G  YNMKCRW PG     + +    L +NH F D+ AI +N D   + P V+KFE+QLYKT+D+KYLLD+QRV GPQ
Sbjct:  347 PMESASPSTRSYLPGSNDSQGSGLRPYYRVERKWALGLQQSRAPPRAIMIEVLKALKELNVCWKKNGDCYNMKCRWCPGFPRVSDML----LDANHSFVDDCAIKDNGDANSRLPAVIKFEIQLYKTKDDKYLLDMQRVTGPQ 485          
The following BLAST results are available for this feature:
BLAST of EY711566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
KIN10_ARATH1.548e-6176.22SNF1-related protein kinase catalytic subunit alph... [more]
KIN11_ARATH2.564e-4863.45SNF1-related protein kinase catalytic subunit alph... [more]
RKIN1_SECCE2.576e-3256.64Carbon catabolite-derepressing protein kinase OS=S... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-009-B11-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711566 ID=EY711566; Name=EY711566; organism=Citrus sinensis; type=EST; length=887bp
TTCGTCGACCCACGCGTCCGACCGTTTGCATCCCAGTGAACCTGCTGTAT
CACCTGTTGCACACCGTGCTCCAGGATTCATGGATTATCAAGGAATGGGT
TTAAGAGGACAGTTGCCATATGAAAGGAAATGGGCTCTTGGACTACAGTC
TCGAGCCCATCCACGTGAAATAATGACAGAAGTTCTCAAAGCTTTGCAAG
AACTGAATGTGGGTTGGAAGAAGATTGGGCACTATAACATGAAGTGCAGA
TGGATTCCGGGCATTTCTGGTCATCACGAAGGCATGGTTAACAATCCACT
GCACAGTAATCACTACTTTGGTGACGAATCTGCCATAATTGAAAATGATG
GTGTTGTCAAGTCACCAAATGTGGTCAAGTTCGAAGTGCAGCTTTACAAA
ACTCGCGATGAAAAATACTTGCTCGACCTTCAGAGGGTTCAGGGTCCACA
GTTTCTGTTTCTGGATCTATGTGCAGCATTTCTTGCACAGCTTCGGGTTC
TTTAATGCTAGGATCTTGAACAAGATCTTAGTCCATGAGCCTTTTGCGAT
GCATGTGAATAACATCGTACGATGTACATAAAACTCGTCCCTCAGTTGGG
ATCTGCGTGTTAACTTTTTCTTTTTCAAATTTTCCCTAGGTTTTATATGG
GTAGTTGTTTCAATCCAGTCATTAGCAGTGAAGCTGGGGCTGGATAAGTC
ACTGGGTAGTCCAGGACTCCNAGTTATGATTTCGACTGCAGAAACTCTTT
TGTAGGATCCTACTCAATGTCGAACCGTAATTTTATGAATTTAATGAAAG
ATTAAGTTCTTTTCTTTCCNNNNNNNNCCGNCNNNNCGNGCAGNNCGCCC
ACCCACAAAAAAAGGGGCGGCGCTCTAGAGGATCCAG
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