EY711538

Overview
NameEY711538
Unique NameEY711538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_DESHY (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain Y51) GN=mtnA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24
Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 290
            TANKIGTYSLA+ A  H I FYVAAP ++IDL + SGQ+I IEER+ KEL   R   G QVA   + V+NPAFDVTPA LITGIITEKG+VT
Sbjct:  243 TANKIGTYSLAVLAHAHGIPFYVAAPTSTIDLKVPSGQDIPIEERNPKEL---REVFGVQVAPPEVPVYNPAFDVTPAKLITGIITEKGIVT 331          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_DESHD (Methylthioribose-1-phosphate isomerase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=mtnA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.472e-24
Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVT 290
            TANKIGTYSLA+ A  H I FYVAAP ++IDL + SGQ+I IEER+ KEL   R   G QVA   + V+NPAFDVTPA LITGIITEKG+VT
Sbjct:  243 TANKIGTYSLAVLAHAHGIPFYVAAPTSTIDLKVPSGQDIPIEERNPKEL---REVFGVQVAPPEVPVYNPAFDVTPAKLITGIITEKGIVT 331          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.963e-24
Identity = 59/90 (65.56%), Postives = 67/90 (74.44%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 284
            TANKIGTY LA+ AK+H I FYVAAP TS DL+L +G  IVIEER + EL       G ++AA GI VWNPAFDVTP  LITGIITE+GV
Sbjct:  254 TANKIGTYQLAIIAKYHGIPFYVAAPSTSCDLSLPTGGSIVIEERPSHELTDIN---GIRIAAPGIDVWNPAFDVTPHELITGIITERGV 340          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.699e-23
Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGV 284
            TANKIGTY LA+ A++H I FYVAAP TS DL+L +G  IVIEER + EL       G ++AA GI VWNPAFDVTP  LITGIITE+GV
Sbjct:  254 TANKIGTYQLAITARYHGIPFYVAAPSTSCDLSLPTGGSIVIEERPSHELTDIN---GVRIAAPGIGVWNPAFDVTPHELITGIITERGV 340          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_PELTS (Methylthioribose-1-phosphate isomerase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mtnA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.945e-23
Identity = 55/90 (61.11%), Postives = 70/90 (77.78%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            ANKIGTYSLA+ A+ H I FYVAAP+++IDL+L+SG+EI IEER + E+       G  VA  G++VWNPAFDVTPA LIT IIT++G+V
Sbjct:  246 ANKIGTYSLAVLAREHKIPFYVAAPVSTIDLSLASGEEIPIEERDSSEVTHL---AGRPVAPEGVNVWNPAFDVTPARLITAIITDRGIV 332          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_DESRM (Methylthioribose-1-phosphate isomerase OS=Desulfotomaculum reducens (strain MI-1) GN=mtnA PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.454e-22
Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 3
Query:   18 ANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADD 308
            ANKIGTY +A+ A  HNI FYVAAPL++ID++LSSG+EI IEER  +E+  +  G G+ +A  G+ VWNPAFDVTP +L+  IITE+GVV    A++
Sbjct:  244 ANKIGTYGVAVLANHHNIPFYVAAPLSTIDMSLSSGEEIPIEERDPQEV--THHG-GQPMAPEGVQVWNPAFDVTPNSLVKAIITERGVVLPPFAEN 337          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA2_THELT (Methylthioribose-1-phosphate isomerase 2 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=mtnA2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 287
            TANKIGTY+LA+ AK+HN+  YV AP ++IDL   +GQ+I IEERSA E+ C       QVA     V+NPAFDVTPA LI+GIITEKG+V
Sbjct:  243 TANKIGTYNLAIVAKYHNVPLYVVAPTSTIDLKTPAGQDIPIEERSADEIRCVG---NSQVAPQESPVFNPAFDVTPAELISGIITEKGIV 330          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.186e-22
Identity = 59/91 (64.84%), Postives = 67/91 (73.63%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 284
            TANKIGTY LA+ AK H I FYVAAP +S DL L +G+EIVIEER ++EL       G ++AA GI VWNPAFDVTP  LIT GIITE GV
Sbjct:  256 TANKIGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIVIEERPSQELTDLN---GVRIAAQGIRVWNPAFDVTPHELITGGIITELGV 343          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22
Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 284
            TANKIGTY LA+ AK H + FYVAAP +S DL L +G+EIVIEER ++EL       G ++AA GI VWNPAFDVTP  LIT GIITE GV
Sbjct:  256 TANKIGTYQLAIVAKHHGVPFYVAAPSSSCDLHLETGKEIVIEERPSQELTDLN---GVRIAAQGIRVWNPAFDVTPHELITGGIITELGV 343          
BLAST of EY711538 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 3
Query:   15 TANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLIT-GIITEKGV 284
            TANK+GTY LA+ AK H I FYVAAP +S DL L +G+EI+IEER  +EL       G ++AA GI VWNPAFDVTP +LIT GIITE GV
Sbjct:  256 TANKVGTYQLAIVAKHHGIPFYVAAPSSSCDLRLETGKEIIIEERPGQELTDVN---GVRIAAPGIGVWNPAFDVTPHDLITGGIITELGV 343          
The following BLAST results are available for this feature:
BLAST of EY711538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
MTNA_DESHY4.472e-2466.30Methylthioribose-1-phosphate isomerase OS=Desulfit... [more]
MTNA_DESHD4.472e-2466.30Methylthioribose-1-phosphate isomerase OS=Desulfit... [more]
MTNA_XENLA9.963e-2465.56Methylthioribose-1-phosphate isomerase OS=Xenopus ... [more]
MTNA_XENTR1.699e-2364.44Methylthioribose-1-phosphate isomerase OS=Xenopus ... [more]
MTNA_PELTS4.945e-2361.11Methylthioribose-1-phosphate isomerase OS=Pelotoma... [more]
MTNA_DESRM2.454e-2256.70Methylthioribose-1-phosphate isomerase OS=Desulfot... [more]
MTNA2_THELT3.205e-2260.44Methylthioribose-1-phosphate isomerase 2 OS=Thermo... [more]
MTNA_RAT4.186e-2264.84Methylthioribose-1-phosphate isomerase OS=Rattus n... [more]
MTNA_MOUSE7.140e-2263.74Methylthioribose-1-phosphate isomerase OS=Mus musc... [more]
MTNA_HUMAN7.140e-2262.64Methylthioribose-1-phosphate isomerase OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-H03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711538 ID=EY711538; Name=EY711538; organism=Citrus sinensis; type=EST; length=759bp
ACCCACGCGTCCGCACTGCTAACAAGATTGGAACCTACAGCCTTGCATTA
TGTGCAAAGTTTCATAATATTCTGTTTTATGTGGCTGCTCCACTGACGTC
AATTGATTTAACCCTTTCTTCTGGACAAGAGATTGTCATAGAGGAGAGGT
CTGCTAAAGAATTGTTGTGCTCTCGAGGAGGACTTGGTGAACAAGTAGCT
GCATCTGGAATCTCTGTCTGGAATCCGGCTTTTGATGTTACCCCAGCTAA
TTTGATCACTGGAATTATAACAGAAAAGGGTGTCGTTACAAAGGCAGGTG
CTGATGATGCTTTTGACATAAAGGATTTCATACAAAAGACAGCCTGAGGC
TCTGATGCAAAAGAAGGTGATTTTTAACCGGATGAAGTGTACCCTTGTAA
ATTTAAACAAGAAATGAAGTTCTCCAGCCTGGGCGAAGATCTGTGGGAAG
GAACATTGTATCTCGCTGCTTTAGAGTCCCTTTTGTTGTGATGATTGCAG
GCATGTATTTTTTGGTTAATCTGGCAGCTAAGGGCAAATATTATAATTAT
TTGACGTAAAAATAGAACTCATATAGGACAAGTTCAAATTAGAAAGTGGA
TCGGAGAGTACCAGTCGTGTGTATTTAATCCTCGCTTTTTTATTTCTTCT
ANGGATATTATTGTTTGAGTACTTTAAAATTTATATATATCTAATAATTA
TAAAAATCATTATAGTCTATCAGGACTATATTTATTTACAAAAAAAAAAA
AAAAAAAAA
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