EY711529

Overview
NameEY711529
Unique NameEY711529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY711529 vs. ExPASy Swiss-Prot
Match: UGPI6_ARATH (Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis thaliana GN=At1g61900 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.506e-94
Identity = 160/293 (54.61%), Postives = 215/293 (73.38%), Query Frame = 3 
Query:   18 PQPFLPLLAPSPSTPISNSSLPKLSGLCTLNFSAAESFVSTTATDCWASFAPYLANVVCCPQFDATMVILMGQYSKYSGMLSLNTTNAQHCLSDFEKILETQGANRNLKKICSIHPANLTEASCPVVDANKFESIVDSSKILTACGKVDPVKECCQQVCQNAILDAARKIAMDGMVSMPENSTRIDDCKSIVFRWLASKLDPSSANGVLRALSNCKVNKVCPLVFPDMANXTKECGYTISNKTACCKAMEKYVSPLQSKASSPTCKH*IVLLHLG*KCRKLCLPKR-YDLCHI 893
            PQPFLP +APSP  P  NS++PKLSGLC+LNFSA+ES + TT+ +CW  FAP LANV+CCPQ DAT+ I++G+ SK +G+L+LN T ++HCLSD E+IL  +GA+  L KICSIH +NLT +SCPV++ ++FES VD++K+L AC K+DPVKECC++ CQNAILDAA  I++    ++ +NS RI+DCK++V RWLA+KLDPS     LR L+NCK+N+VCPLVFP M +    C   +SN+T CC+AME YVS LQ +      +       LG K +KL + K  + +CHI
Sbjct:   42 PQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASESLIQTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNKICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNISLKASETLTDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCKINRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQKLNITKNIFSVCHI 334
The following BLAST results are available for this feature:
BLAST of EY711529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UGPI6_ARATH9.506e-9454.61Uncharacterized GPI-anchored protein At1g61900 OS=... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-008-G06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711529 ID=EY711529; Name=EY711529; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGCAGAACCTCAACCCTTTCTACCTCTTTTAGCTCCTTCT
CCATCGACACCAATTTCAAACAGCAGTCTTCCAAAATTATCAGGTTTATG
TACATTAAATTTTTCTGCTGCTGAAAGTTTTGTGAGCACAACAGCAACTG
ACTGCTGGGCTTCTTTTGCACCATATTTAGCCAATGTAGTATGTTGTCCT
CAATTTGATGCCACCATGGTGATTCTTATGGGGCAGTATAGTAAATATTC
TGGAATGCTTAGTTTGAACACAACAAATGCTCAACACTGCCTCTCAGATT
TTGAGAAGATTTTAGAAACTCAAGGCGCAAATCGGAATCTTAAAAAGATA
TGTTCGATTCATCCAGCAAACCTTACTGAAGCTTCTTGCCCGGTTGTGGA
TGCTAACAAGTTTGAGAGCATAGTTGATTCTTCAAAAATTTTGACTGCTT
GTGGAAAAGTTGATCCAGTCAAGGAGTGTTGTCAACAAGTTTGCCAAAAT
GCTATTCTAGATGCTGCTAGAAAAATTGCCATGGACGGTATGGTAAGTAT
GCCTGAGAACTCAACCAGGATTGATGATTGTAAGAGTATTGTCTTCCGGT
GGCTGGCCAGTAAACTAGATCCTTCTTCAGCAAACGGTGTTCTCAGAGCA
CTTTCCAATTGCAAAGTAAATAAAGTCTGTCCCTTGGTTTTTCCAGACAT
GGCAAATNGTACCAAAGAATGTGGATATACAATTAGCAATAAAACAGCTT
GTTGTAAAGCCATGGAGAAGTATGTGTCCCCCCTACAGAGCAAAGCTTCA
TCACCAACTTGCAAGCATTGAATTGTGCTGCTTCACTTGGGATGAAAGTG
CAGAAAGCTATGTCTCCCAAAACGTTATGATCTTTGTCATATAATCTGAA
NGACTCTCTCTTCAGNTNNGATAC
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